RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 DUX3Q96PT4 197 aa5.94□□□□□ -1.46
RTF1-205ENST00000558298 PPDPFQ9H3Y8 114 aa5.94□□□□□ -1.46
RTF1-205ENST00000558298 COL7A1Q02388 2944 aa5.94□□□□□ -1.46
RTF1-205ENST00000558298 IGKV2-40A0A087WW87 121 aaPredicted RBP5.93□□□□□ -1.46
RTF1-205ENST00000558298 TRAV21A0A0B4J279 112 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 SMIM9A6NGZ8 99 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 K7EMT4 169 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 NDUFA4O00483 81 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 TIMM17BO60830 172 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 IGKV2D-40P01614 121 aaPredicted RBP5.93□□□□□ -1.46
RTF1-205ENST00000558298 KRTAP10-11P60412 298 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 DAND5Q8N907 189 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 LINC00477Q96M19 166 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 LINC01587Q99440 93 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 DNAH9Q9NYC9 4486 aa5.93□□□□□ -1.46
RTF1-205ENST00000558298 K7EIL1 84 aa5.92□□□□□ -1.46
RTF1-205ENST00000558298 PRB2P02812 416 aaPredicted RBP5.92□□□□□ -1.46
RTF1-205ENST00000558298 CTSGP08311 255 aa5.92□□□□□ -1.46
RTF1-205ENST00000558298 COX7CP15954 63 aa5.92□□□□□ -1.46
RTF1-205ENST00000558298 EMP1P54849 157 aa5.92□□□□□ -1.46
RTF1-205ENST00000558298 ZNF56Q15929 161 aa5.92□□□□□ -1.46
RTF1-205ENST00000558298 ZNF876PQ49A33 203 aa5.92□□□□□ -1.46
RTF1-205ENST00000558298 CLEC19AQ6UXS0 136 aa5.92□□□□□ -1.46
RTF1-205ENST00000558298 C17orf77Q96MU5 243 aa5.92□□□□□ -1.46
RTF1-205ENST00000558298 METTL26Q96S19 204 aa5.92□□□□□ -1.46
RTF1-205ENST00000558298 IGHV7-4-1A0A0J9YVY3 117 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 TRBV6-5A0A0K0K1A5 114 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 A4D1N5 150 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 A8MZ25 164 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 NDUFC2-KCTD14E9PQ53 114 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 LST1O00453 97 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 NXPH4O95158 308 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 S100A4P26447 101 aaKnown RBP5.91□□□□□ -1.46
RTF1-205ENST00000558298 ZNF80P51504 273 aaPredicted RBP5.91□□□□□ -1.46
RTF1-205ENST00000558298 SYNJ2BPP57105 145 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 ZNF415Q09FC8 603 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 FAM222AQ5U5X8 452 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 DAZ1Q9NQZ3 744 aaKnown RBP5.91□□□□□ -1.46
RTF1-205ENST00000558298 MSRB1Q9NZV6 116 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 PHLDA3Q9Y5J5 127 aa5.91□□□□□ -1.46
RTF1-205ENST00000558298 TRGV11A0A075B6L2 103 aa5.9□□□□□ -1.46
RTF1-205ENST00000558298 IGKV3D-20A0A0C4DH25 116 aa5.9□□□□□ -1.46
RTF1-205ENST00000558298 IGIPA6NJ69 53 aa5.9□□□□□ -1.46
RTF1-205ENST00000558298 GAGE2AQ6NT46 116 aa5.9□□□□□ -1.46
RTF1-205ENST00000558298 RNF182Q8N6D2 247 aa5.9□□□□□ -1.46
RTF1-205ENST00000558298 ICOSQ9Y6W8 199 aa5.9□□□□□ -1.46
RTF1-205ENST00000558298 IGLV4-69A0A075B6H9 119 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 TRBV27A0A0K0K1C4 114 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 TEX49A0A1B0GTD5 131 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 FAM236AA0A1B0GUQ0 79 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 FAM236BA0A1B0GV22 79 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 TRACP01848 142 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 HERVK_113P63121 156 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 CIRBPQ14011 172 aaKnown RBP5.89□□□□□ -1.47
RTF1-205ENST00000558298 UNQ9165/PRO28630Q6UXU0 137 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 SDIM1Q6ZPB5 146 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 ZFAND3Q9H8U3 227 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 TP53TG1Q9Y2A0 90 aa5.89□□□□□ -1.47
RTF1-205ENST00000558298 TMEM223A0PJW6 202 aa5.88□□□□□ -1.47
RTF1-205ENST00000558298 ZNF22P17026 224 aaPredicted RBP5.88□□□□□ -1.47
RTF1-205ENST00000558298 DEFB114Q30KQ6 69 aa5.88□□□□□ -1.47
RTF1-205ENST00000558298 S100A7L2Q5SY68 101 aa5.88□□□□□ -1.47
RTF1-205ENST00000558298 Q8TAT8 98 aa5.88□□□□□ -1.47
RTF1-205ENST00000558298 IGHV3-21A0A0B4J1V1 117 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 H7C423 109 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 BUB3O43684 328 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 TRIAP1O43715 76 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 IGHV3-23P01764 117 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 GATA1P15976 413 aaPredicted RBP5.87□□□□□ -1.47
RTF1-205ENST00000558298 MIAQ16674 131 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 C5orf38Q86SI9 138 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 TRPT1Q86TN4 253 aaKnown RBP5.87□□□□□ -1.47
RTF1-205ENST00000558298 ZNF575Q86XF7 245 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 APRG1Q8IVJ8 170 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 AMELXQ99217 191 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 AGPAT4-IT1Q9H0P7 198 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 PYGO1Q9Y3Y4 419 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 S4R3C0 116 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 U3KQE9 123 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 STAB2Q8WWQ8 2551 aa5.87□□□□□ -1.47
RTF1-205ENST00000558298 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
RTF1-205ENST00000558298 LINC00694P0DN24 101 aa5.86□□□□□ -1.47
RTF1-205ENST00000558298 POLR2KP53803 58 aaKnown RBP5.86□□□□□ -1.47
RTF1-205ENST00000558298 ATP5EP2Q5VTU8 51 aa5.86□□□□□ -1.47
RTF1-205ENST00000558298 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.86□□□□□ -1.47
RTF1-205ENST00000558298 Q6ZQT7 251 aa5.86□□□□□ -1.47
RTF1-205ENST00000558298 MUSTN1Q8IVN3 82 aa5.86□□□□□ -1.47
RTF1-205ENST00000558298 DYNLRB2Q8TF09 96 aa5.86□□□□□ -1.47
RTF1-205ENST00000558298 B9D2Q9BPU9 175 aa5.86□□□□□ -1.47
RTF1-205ENST00000558298 CHCHD5Q9BSY4 110 aa5.86□□□□□ -1.47
RTF1-205ENST00000558298 BCE1O60756 84 aa5.85□□□□□ -1.47
RTF1-205ENST00000558298 NDUFC2O95298 119 aa5.85□□□□□ -1.47
RTF1-205ENST00000558298 CRYGDP07320 174 aa5.85□□□□□ -1.47
RTF1-205ENST00000558298 ID1P41134 155 aa5.85□□□□□ -1.47
RTF1-205ENST00000558298 HIST1H4AP62805 103 aaKnown RBP5.85□□□□□ -1.47
RTF1-205ENST00000558298 SFTA2Q6UW10 78 aa5.85□□□□□ -1.47
RTF1-205ENST00000558298 FAM19A5Q7Z5A7 132 aaPredicted RBP5.85□□□□□ -1.47
RTF1-205ENST00000558298 TMEM61Q8N0U2 210 aa5.85□□□□□ -1.47
RTF1-205ENST00000558298 TIMM21Q9BVV7 248 aa5.85□□□□□ -1.47
RTF1-205ENST00000558298 EDA2RQ9HAV5 297 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms