RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PLA2G10O15496 165 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 LYRM1O43325 122 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 GIPP09681 153 aaPredicted RBP3.22□□□□□ -1.89
SPG11-208ENST00000558155 UBE2V1Q13404 147 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 PEA15Q15121 130 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 RHEBQ15382 184 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 C6orf226Q5I0X4 101 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 ZNF664Q8N3J9 261 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 NEXN-AS1Q8NBZ9 246 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 PRSS3P2Q8NHM4 247 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 OCC1Q8TAD7 63 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 MRAP2Q96G30 205 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 BTF3L4Q96K17 158 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 DERL1Q9BUN8 251 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 MAP1LC3CQ9BXW4 147 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 PKIGQ9Y2B9 76 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 TNXBP22105 4242 aa3.22□□□□□ -1.89
SPG11-208ENST00000558155 TRAV26-2A0A0B4J265 109 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 IGHV1-24A0A0C4DH33 117 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 TRBV6-1A0A0K0K1D8 114 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 A0A1B0GUV1 79 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 H0YIZ8 118 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 IFNA1P01562 189 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 ARL14EPLP0DKL9 152 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 GCHFRP30047 84 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 RPL32P62910 135 aaKnown RBP3.21□□□□□ -1.9
SPG11-208ENST00000558155 ZNF56Q15929 161 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 IQCJQ1A5X6 159 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 LRRC37A5PQ49AS3 106 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 FAM162BQ5T6X4 162 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 NTM-AS1Q6ZSK4 140 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 LINC01551Q86U37 167 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 SMIM3Q9BZL3 60 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 TMEM167BQ9NRX6 74 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 SPANXB1Q9NS25 103 aaPredicted RBP3.21□□□□□ -1.9
SPG11-208ENST00000558155 PSORS1C2Q9UIG4 136 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 CSDC2Q9Y534 153 aaKnown RBP3.21□□□□□ -1.9
SPG11-208ENST00000558155 ARL2-SNX15V9GYD0 113 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 V9GYY9 64 aa3.21□□□□□ -1.9
SPG11-208ENST00000558155 TMSB15BA0A087X1C1 80 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 MUC21A0A0G2JKD1 596 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 A0A0U1RRA0 63 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 A0A1W2PRE2 83 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 PAGE4O60829 102 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 SH2D1AO60880 128 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 SIX6O95475 246 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 CXorf1O96002 111 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 MT-ND4LP03901 98 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 SMIM17P0DL12 118 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 RPL12P30050 165 aaKnown RBP3.2□□□□□ -1.9
SPG11-208ENST00000558155 SULT1A2P50226 295 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 CRIP1P50238 77 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 SRSF3P84103 164 aaKnown RBP3.2□□□□□ -1.9
SPG11-208ENST00000558155 TMEM241Q24JQ0 296 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 Q5BKY6 102 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 FA2HQ7L5A8 372 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 C20orf203Q8NBC4 194 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 OR13C6PQ8NH95 151 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 ISOC2Q96AB3 205 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 AQP10Q96PS8 301 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 SIGMAR1Q99720 223 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 ZNF471Q9BX82 626 aaPredicted RBP3.2□□□□□ -1.9
SPG11-208ENST00000558155 SMCO4Q9NRQ5 59 aa3.2□□□□□ -1.9
SPG11-208ENST00000558155 GAGE12HA6NDE8 117 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 FAM74A7A6NL05 159 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 CACNG7P62955 275 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 PRR4Q16378 134 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 FAM74A3Q4VXF1 159 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 COX8CQ7Z4L0 72 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 HIST1H2BAQ96A08 127 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 TMEM243Q9BU79 118 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 SNHG12Q9BXW3 62 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 ACTR3CQ9C0K3 210 aaPredicted RBP3.19□□□□□ -1.9
SPG11-208ENST00000558155 CST9LQ9H4G1 147 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 WFDC1Q9HC57 220 aa3.19□□□□□ -1.9
SPG11-208ENST00000558155 IGLV4-60A0A075B6I1 120 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 A0A096LNI7 61 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 J3QR89 54 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 PEX7O00628 323 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 UBE2L6O14933 153 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 PPP1R2P9O14990 202 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 MPC2O95563 127 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 VPREB1P12018 145 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 ATP6V0CP27449 155 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 UBE2G1P62253 170 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 SERF2P84101 59 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 IFITM3Q01628 133 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 HIGD2BQ4VC39 106 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 PYY3Q5JQD4 70 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 SPANXN1Q5VSR9 72 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 TMUB2Q71RG4 321 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 Q86TA4 180 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 SMIM20Q8N5G0 67 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 C15orf56Q8N910 161 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 PPP1R1CQ8WVI7 109 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 PSMG3Q9BT73 122 aaPredicted RBP3.18□□□□□ -1.9
SPG11-208ENST00000558155 PRO1933Q9H354 126 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 TNFSF18Q9UNG2 199 aa3.18□□□□□ -1.9
SPG11-208ENST00000558155 GVQW2A0A096LPI5 108 aaPredicted RBP3.17□□□□□ -1.9
SPG11-208ENST00000558155 MT-ND6P03923 174 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms