RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ESDP10768 282 aa5.93□□□□□ -1.46
SPG11-207ENST00000558138 XCL1P47992 114 aa5.93□□□□□ -1.46
SPG11-207ENST00000558138 KIAA1644Q3SXP7 199 aa5.93□□□□□ -1.46
SPG11-207ENST00000558138 AP5S1Q9NUS5 200 aa5.93□□□□□ -1.46
SPG11-207ENST00000558138 FAT2Q9NYQ8 4349 aa5.93□□□□□ -1.46
SPG11-207ENST00000558138 hDV102S1A0JD36 115 aa5.92□□□□□ -1.46
SPG11-207ENST00000558138 RPL32P62910 135 aaKnown RBP5.92□□□□□ -1.46
SPG11-207ENST00000558138 COX19Q49B96 90 aa5.92□□□□□ -1.46
SPG11-207ENST00000558138 RNASE13Q5GAN3 156 aaKnown RBP5.92□□□□□ -1.46
SPG11-207ENST00000558138 C10orf91Q5T1B1 145 aa5.92□□□□□ -1.46
SPG11-207ENST00000558138 CFAP161Q6P656 301 aa5.92□□□□□ -1.46
SPG11-207ENST00000558138 ZNF664Q8N3J9 261 aa5.92□□□□□ -1.46
SPG11-207ENST00000558138 CHCHD10Q8WYQ3 142 aaPredicted RBP5.92□□□□□ -1.46
SPG11-207ENST00000558138 TRAV13-1A0A0B4J241 112 aa5.91□□□□□ -1.46
SPG11-207ENST00000558138 CCL25O15444 150 aa5.91□□□□□ -1.46
SPG11-207ENST00000558138 CDK2AP2O75956 126 aa5.91□□□□□ -1.46
SPG11-207ENST00000558138 IFI27P40305 119 aaPredicted RBP5.91□□□□□ -1.46
SPG11-207ENST00000558138 KRTAP10-1P60331 282 aa5.91□□□□□ -1.46
SPG11-207ENST00000558138 RPL39P62891 51 aaKnown RBP5.91□□□□□ -1.46
SPG11-207ENST00000558138 FABP9Q0Z7S8 132 aa5.91□□□□□ -1.46
SPG11-207ENST00000558138 MRPL52Q86TS9 123 aaKnown RBP5.91□□□□□ -1.46
SPG11-207ENST00000558138 UBE2D4Q9Y2X8 147 aa5.91□□□□□ -1.46
SPG11-207ENST00000558138 LINC00959A0A1B0GUT2 108 aa5.9□□□□□ -1.46
SPG11-207ENST00000558138 MT-ND6P03923 174 aa5.9□□□□□ -1.46
SPG11-207ENST00000558138 MALP21145 153 aa5.9□□□□□ -1.46
SPG11-207ENST00000558138 Q6ZUT4 128 aa5.9□□□□□ -1.46
SPG11-207ENST00000558138 Q8N8P6 123 aa5.9□□□□□ -1.46
SPG11-207ENST00000558138 PRSS3P2Q8NHM4 247 aa5.9□□□□□ -1.46
SPG11-207ENST00000558138 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.46
SPG11-207ENST00000558138 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.46
SPG11-207ENST00000558138 NXT2Q9NPJ8 142 aaKnown RBP5.9□□□□□ -1.46
SPG11-207ENST00000558138 CDC42SE2Q9NRR3 84 aa5.9□□□□□ -1.46
SPG11-207ENST00000558138 SPANXA1Q9NS26 97 aa5.9□□□□□ -1.46
SPG11-207ENST00000558138 PKD1P98161 4303 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 TGIF2-C20orf24A0A0A6YYL0 155 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 IFITM10A6NMD0 228 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 PRSS1P07477 247 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 LINC01620Q4KN68 170 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 HIGD2BQ4VC39 106 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 ORMDL2Q53FV1 153 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 Q6ZN92 141 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 SMCO4Q9NRQ5 59 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 CYSLTR1Q9Y271 337 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 TRAPPC1Q9Y5R8 145 aa5.89□□□□□ -1.47
SPG11-207ENST00000558138 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.88□□□□□ -1.47
SPG11-207ENST00000558138 C1orf196B1AJZ1 125 aa5.88□□□□□ -1.47
SPG11-207ENST00000558138 G0S2P27469 103 aa5.88□□□□□ -1.47
SPG11-207ENST00000558138 HAMPP81172 84 aa5.88□□□□□ -1.47
SPG11-207ENST00000558138 FA2HQ7L5A8 372 aa5.88□□□□□ -1.47
SPG11-207ENST00000558138 C2orf88Q9BSF0 95 aa5.88□□□□□ -1.47
SPG11-207ENST00000558138 TIMM21Q9BVV7 248 aa5.88□□□□□ -1.47
SPG11-207ENST00000558138 CSDC2Q9Y534 153 aaKnown RBP5.88□□□□□ -1.47
SPG11-207ENST00000558138 FOXI1Q12951 378 aa5.87□□□□□ -1.47
SPG11-207ENST00000558138 KRTAP26-1Q6PEX3 210 aa5.87□□□□□ -1.47
SPG11-207ENST00000558138 CD164L2Q6UWJ8 174 aa5.87□□□□□ -1.47
SPG11-207ENST00000558138 C2orf66Q6UXQ4 117 aa5.87□□□□□ -1.47
SPG11-207ENST00000558138 TEX43Q6ZNM6 134 aa5.87□□□□□ -1.47
SPG11-207ENST00000558138 SLC7A5P1Q8MH63 180 aa5.87□□□□□ -1.47
SPG11-207ENST00000558138 IGHV1-58A0A0C4DH39 117 aa5.86□□□□□ -1.47
SPG11-207ENST00000558138 PRSS47A8MTI9 375 aa5.86□□□□□ -1.47
SPG11-207ENST00000558138 ZNF561-AS1K7EIQ3 104 aa5.86□□□□□ -1.47
SPG11-207ENST00000558138 K7EMI3 77 aa5.86□□□□□ -1.47
SPG11-207ENST00000558138 COX7A2LO14548 114 aa5.86□□□□□ -1.47
SPG11-207ENST00000558138 APOMO95445 188 aa5.86□□□□□ -1.47
SPG11-207ENST00000558138 DPH3Q96FX2 82 aa5.86□□□□□ -1.47
SPG11-207ENST00000558138 TMEM141Q96I45 108 aa5.86□□□□□ -1.47
SPG11-207ENST00000558138 OPRPNQ99935 248 aaPredicted RBP5.86□□□□□ -1.47
SPG11-207ENST00000558138 IGHV3-64A0A075B6Q5 118 aa5.85□□□□□ -1.47
SPG11-207ENST00000558138 MRPS36P82909 103 aaKnown RBP5.85□□□□□ -1.47
SPG11-207ENST00000558138 C5orf38Q86SI9 138 aa5.85□□□□□ -1.47
SPG11-207ENST00000558138 C15orf56Q8N910 161 aa5.85□□□□□ -1.47
SPG11-207ENST00000558138 ALKBH7Q9BT30 221 aaPredicted RBP5.85□□□□□ -1.47
SPG11-207ENST00000558138 VCX2Q9H322 139 aa5.85□□□□□ -1.47
SPG11-207ENST00000558138 IGLV4-3A0A075B6K6 122 aa5.84□□□□□ -1.47
SPG11-207ENST00000558138 SMR3BP02814 79 aaPredicted RBP5.84□□□□□ -1.47
SPG11-207ENST00000558138 PAPPA-AS1Q5QFB9 102 aa5.84□□□□□ -1.47
SPG11-207ENST00000558138 SCGB3A1Q96QR1 104 aa5.84□□□□□ -1.47
SPG11-207ENST00000558138 PYGO1Q9Y3Y4 419 aa5.84□□□□□ -1.47
SPG11-207ENST00000558138 EPM2AB3EWF7 344 aa5.83□□□□□ -1.48
SPG11-207ENST00000558138 FAM229AH3BQW9 127 aa5.83□□□□□ -1.48
SPG11-207ENST00000558138 XGP55808 180 aa5.83□□□□□ -1.48
SPG11-207ENST00000558138 CNBPP62633 177 aaKnown RBP5.83□□□□□ -1.48
SPG11-207ENST00000558138 CBLN2Q8IUK8 224 aa5.83□□□□□ -1.48
SPG11-207ENST00000558138 LINC00526Q96FQ7 95 aa5.83□□□□□ -1.48
SPG11-207ENST00000558138 CARD19Q96LW7 228 aa5.83□□□□□ -1.48
SPG11-207ENST00000558138 FAM30AQ9NZY2 134 aa5.83□□□□□ -1.48
SPG11-207ENST00000558138 DNAH11Q96DT5 4516 aa5.83□□□□□ -1.48
SPG11-207ENST00000558138 GVQW2A0A096LPI5 108 aaPredicted RBP5.82□□□□□ -1.48
SPG11-207ENST00000558138 RAB5BP61020 215 aa5.82□□□□□ -1.48
SPG11-207ENST00000558138 SPAG11BQ08648 103 aa5.82□□□□□ -1.48
SPG11-207ENST00000558138 Q8N1X5 172 aa5.82□□□□□ -1.48
SPG11-207ENST00000558138 C9orf163Q8N9P6 203 aa5.82□□□□□ -1.48
SPG11-207ENST00000558138 ORAOV1Q8WV07 137 aa5.82□□□□□ -1.48
SPG11-207ENST00000558138 TOMM6Q96B49 74 aa5.82□□□□□ -1.48
SPG11-207ENST00000558138 CAMK2N2Q96S95 79 aa5.82□□□□□ -1.48
SPG11-207ENST00000558138 PKIGQ9Y2B9 76 aa5.82□□□□□ -1.48
SPG11-207ENST00000558138 LINC01549A6NIU2 74 aa5.81□□□□□ -1.48
SPG11-207ENST00000558138 NDUFA6P56556 154 aa5.81□□□□□ -1.48
SPG11-207ENST00000558138 ZC2HC1BQ5TFG8 222 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms