RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 LEPROTL1O95214 131 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 SCGB1D1O95968 90 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 DNAH10OSP0CZ25 163 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 IFI27P40305 119 aaPredicted RBP5.1□□□□□ -1.59
SPG11-205ENST00000558080 KRTDAPP60985 99 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 S100A12P80511 92 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 NFE4Q86UQ8 179 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 MAPKAPK5-AS1Q8N8E1 139 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 Q8N8P6 123 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 SLC25A29Q8N8R3 303 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 NRACQ8N912 160 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 C20orf78Q9BR46 151 aa5.1□□□□□ -1.59
SPG11-205ENST00000558080 LRP1BQ9NZR2 4599 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 TRAV26-2A0A0B4J265 109 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 HBDP02042 147 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 CRYGDP07320 174 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 C3orf79P0CE67 100 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 RHOHQ15669 191 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 SH2D6Q7Z4S9 175 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 PRADC1Q9BSG0 188 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 JPT2Q9H910 190 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 KIF25-AS1Q9Y6Z4 181 aa5.09□□□□□ -1.59
SPG11-205ENST00000558080 A0A087WTM6 91 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 TRAV8-6A0A0B4J262 113 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 IGHV3-38A0A0C4DH36 116 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 TRBV6-4A0A1B0GX49 114 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 C20orf202A1L168 122 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 A8MWV9 139 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 K7EMI3 77 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 CIDEAO60543 219 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 IGHV3-30P01768 117 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 IGHV3-33P01772 117 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 IGHV3-30-3P0DP02 117 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 IGHV3-30-5P0DP03 117 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 TIRAPP58753 221 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 SUMO2P61956 95 aaKnown RBP5.08□□□□□ -1.6
SPG11-205ENST00000558080 RPL32P62910 135 aaKnown RBP5.08□□□□□ -1.6
SPG11-205ENST00000558080 PMCHL1Q16048 86 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 SUMO4Q6EEV6 95 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 ATP6V0E2Q8NHE4 81 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 TMEM70Q9BUB7 260 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 SMIM2Q9BVW6 85 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 MAP1LC3CQ9BXW4 147 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 HSPG2P98160 4391 aa5.08□□□□□ -1.6
SPG11-205ENST00000558080 A0A087WWL8 130 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 GAGE12JA6NER3 117 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 F5H697 171 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 H7C1H1 209 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 RHODO00212 210 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 GAS8-AS1O95177 125 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 FCER1GP30273 86 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 PKIAP61925 76 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 GAGE1Q13065 139 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 GAGE4Q13068 117 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 GAGE5Q13069 117 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 LAGE3Q14657 143 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 ZNF56Q15929 161 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 GAGE13Q4V321 117 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 ORMDL2Q53FV1 153 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 FAM74A4Q5TZK3 123 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 PET117Q6UWS5 81 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 TEX43Q6ZNM6 134 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 C10orf126Q8N4M7 172 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 Q9HAA7 133 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 ST20Q9HBF5 79 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 Q9UF83 564 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 DNAH5Q8TE73 4624 aa5.07□□□□□ -1.6
SPG11-205ENST00000558080 APOBP04114 4563 aaKnown RBP5.06□□□□□ -1.6
SPG11-205ENST00000558080 TRBV6-5A0A0K0K1A5 114 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 PCP4L1A6NKN8 68 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 TSTD3H0UI37 97 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 SYS1-DBNDD2H3BUS1 97 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 K7EP13 123 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 PSCAO43653 123 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 LINC01556Q5JQF7 62 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 LELP1Q5T871 98 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 ZFP2Q6ZN57 461 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 Q8N976 141 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 RPL39LQ96EH5 51 aaKnown RBP5.06□□□□□ -1.6
SPG11-205ENST00000558080 GTSF1LQ9H1H1 148 aa5.06□□□□□ -1.6
SPG11-205ENST00000558080 A0A096LNJ9 63 aa5.05□□□□□ -1.6
SPG11-205ENST00000558080 LINC01549A6NIU2 74 aa5.05□□□□□ -1.6
SPG11-205ENST00000558080 IBA57-AS1B1ANH7 110 aa5.05□□□□□ -1.6
SPG11-205ENST00000558080 VCYO14598 125 aa5.05□□□□□ -1.6
SPG11-205ENST00000558080 TCAPO15273 167 aa5.05□□□□□ -1.6
SPG11-205ENST00000558080 G0S2P27469 103 aa5.05□□□□□ -1.6
SPG11-205ENST00000558080 KRTAP10-1P60331 282 aa5.05□□□□□ -1.6
SPG11-205ENST00000558080 LINC00173Q6ZV60 143 aa5.05□□□□□ -1.6
SPG11-205ENST00000558080 VAMP8Q9BV40 100 aa5.05□□□□□ -1.6
SPG11-205ENST00000558080 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
SPG11-205ENST00000558080 M0QY20 66 aa5.04□□□□□ -1.6
SPG11-205ENST00000558080 ATP5LO75964 103 aa5.04□□□□□ -1.6
SPG11-205ENST00000558080 UFSP1Q6NVU6 142 aa5.04□□□□□ -1.6
SPG11-205ENST00000558080 NTN5Q8WTR8 489 aaPredicted RBP5.04□□□□□ -1.6
SPG11-205ENST00000558080 IFI27L1Q96BM0 104 aa5.04□□□□□ -1.6
SPG11-205ENST00000558080 KIR2DL4Q99706 377 aa5.04□□□□□ -1.6
SPG11-205ENST00000558080 TRBV27A0A0K0K1C4 114 aa5.03□□□□□ -1.6
SPG11-205ENST00000558080 LRCOL1A6NCL2 159 aa5.03□□□□□ -1.6
SPG11-205ENST00000558080 SDHAF1A6NFY7 115 aa5.03□□□□□ -1.6
SPG11-205ENST00000558080 LINC00694P0DN24 101 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms