RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 ARPC5O15511 151 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 RPL13AP40429 203 aaKnown RBP4.47□□□□□ -1.69
PRKCH-225ENST00000557559 PCP4P48539 62 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 FHITP49789 147 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 PTTG1IPP53801 180 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 AMMECR1LQ6DCA0 310 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 RASL11AQ6T310 242 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 SVBPQ8N300 66 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 PRR26Q8N8Z3 221 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 STOML3Q8TAV4 291 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 ISOC2Q96AB3 205 aa4.47□□□□□ -1.69
PRKCH-225ENST00000557559 TRAV1-1A0A0B4J248 108 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 TMEM218A2RU14 115 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 HSBP1L1C9JCN9 74 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 H7C423 109 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 FGF6P10767 208 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 UBE2D1P51668 147 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 RAB5BP61020 215 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 SYCNQ0VAF6 134 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 C1orf137Q5JT78 98 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 C10orf91Q5T1B1 145 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 SUMO4Q6EEV6 95 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 INO80EQ8NBZ0 244 aaPredicted RBP4.46□□□□□ -1.7
PRKCH-225ENST00000557559 TSKUQ8WUA8 353 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 NIT2Q9NQR4 276 aa4.46□□□□□ -1.7
PRKCH-225ENST00000557559 CARHSP1Q9Y2V2 147 aaKnown RBP4.46□□□□□ -1.7
PRKCH-225ENST00000557559 MUC21A0A140T8X8 626 aa4.45□□□□□ -1.7
PRKCH-225ENST00000557559 C5orf52A6NGY3 159 aa4.45□□□□□ -1.7
PRKCH-225ENST00000557559 H0Y9J4 135 aa4.45□□□□□ -1.7
PRKCH-225ENST00000557559 ZNF25P17030 456 aaPredicted RBP4.45□□□□□ -1.7
PRKCH-225ENST00000557559 FOXI1Q12951 378 aa4.45□□□□□ -1.7
PRKCH-225ENST00000557559 KCNRGQ8N5I3 272 aa4.45□□□□□ -1.7
PRKCH-225ENST00000557559 BORCS7-ASMTA0A0B4J1R7 106 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 KANTRA0A1W2PQU2 76 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 MAP1LC3B2A6NCE7 125 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 C1orf196B1AJZ1 125 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 BCL2L11O43521 198 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 NCR2O95944 276 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 IGLV7-43P04211 117 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 TRGC1P0CF51 173 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 CAMPP49913 170 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
PRKCH-225ENST00000557559 EIF5AP63241 154 aaKnown RBP4.44□□□□□ -1.7
PRKCH-225ENST00000557559 GAGE2BQ13066 116 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 PEA15Q15121 130 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 ZNF726P1Q15940 193 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 AKR1C8PQ5T2L2 129 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 CST9LP1Q5W188 147 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 RNASEKQ6P5S7 137 aaKnown RBP4.44□□□□□ -1.7
PRKCH-225ENST00000557559 MRPL52Q86TS9 123 aaKnown RBP4.44□□□□□ -1.7
PRKCH-225ENST00000557559 CBLN2Q8IUK8 224 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 OR5A1Q8NGJ0 315 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 C2orf88Q9BSF0 95 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 MAP1LC3BQ9GZQ8 125 aa4.44□□□□□ -1.7
PRKCH-225ENST00000557559 COLCA2A8K830 154 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 APOMO95445 188 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 APCSP02743 223 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 LINC00614P0C842 121 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 ADCYAP1P18509 176 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 XCL1P47992 114 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 BLOC1S1P78537 153 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 BAGE2Q86Y30 109 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 NUDT10Q8NFP7 164 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 NUDT11Q96G61 164 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 TMEM101Q96IK0 257 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 BTF3L4Q96K17 158 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 MLST8Q9BVC4 326 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 TPPP3Q9BW30 176 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 SMCO4Q9NRQ5 59 aa4.43□□□□□ -1.7
PRKCH-225ENST00000557559 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 XKRY2A2RUG3 117 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 F2Z2F3 143 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 CCL25O15444 150 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 NTF3P20783 257 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 RPS20P60866 119 aaKnown RBP4.42□□□□□ -1.7
PRKCH-225ENST00000557559 RPL18AQ02543 176 aaKnown RBP4.42□□□□□ -1.7
PRKCH-225ENST00000557559 ZNF345Q14585 488 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 SS18Q15532 418 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
PRKCH-225ENST00000557559 EIF5AL1Q6IS14 154 aaKnown RBP4.42□□□□□ -1.7
PRKCH-225ENST00000557559 LINC00526Q96FQ7 95 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 SEC11CQ9BY50 192 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
PRKCH-225ENST00000557559 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.41□□□□□ -1.7
PRKCH-225ENST00000557559 LINC00959A0A1B0GUT2 108 aa4.41□□□□□ -1.7
PRKCH-225ENST00000557559 A0A1W2PNN7 141 aa4.41□□□□□ -1.7
PRKCH-225ENST00000557559 IGKV2-29A2NJV5 120 aaPredicted RBP4.41□□□□□ -1.7
PRKCH-225ENST00000557559 IGLC6P0CF74 106 aa4.41□□□□□ -1.7
PRKCH-225ENST00000557559 CD164L2Q6UWJ8 174 aa4.41□□□□□ -1.7
PRKCH-225ENST00000557559 OR2D3Q8NGH3 330 aa4.41□□□□□ -1.7
PRKCH-225ENST00000557559 CAMK2N2Q96S95 79 aa4.41□□□□□ -1.7
PRKCH-225ENST00000557559 A0A087WZ39 114 aa4.4□□□□□ -1.71
PRKCH-225ENST00000557559 C9orf118A6NHY6 69 aa4.4□□□□□ -1.71
PRKCH-225ENST00000557559 MT-ND4LP03901 98 aa4.4□□□□□ -1.71
PRKCH-225ENST00000557559 KRTAP1-4P0C5Y4 121 aa4.4□□□□□ -1.71
PRKCH-225ENST00000557559 BCL2P10415 239 aa4.4□□□□□ -1.71
PRKCH-225ENST00000557559 FABP9Q0Z7S8 132 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms