RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 VSIG2Q96IQ7 327 aa8.73□□□□□ -1.01
SHMT2-233ENST00000557529 TRAV26-1A0A087WT03 109 aa8.73□□□□□ -1.01
SHMT2-233ENST00000557529 C11orf86A6NJI1 115 aa8.73□□□□□ -1.01
SHMT2-233ENST00000557529 DLEU1O43261 78 aa8.73□□□□□ -1.01
SHMT2-233ENST00000557529 HTN3P15516 51 aa8.73□□□□□ -1.01
SHMT2-233ENST00000557529 ZNF25P17030 456 aaPredicted RBP8.73□□□□□ -1.01
SHMT2-233ENST00000557529 NMUP48645 174 aa8.73□□□□□ -1.01
SHMT2-233ENST00000557529 AMMECR1LQ6DCA0 310 aa8.73□□□□□ -1.01
SHMT2-233ENST00000557529 OR5A1Q8NGJ0 315 aa8.73□□□□□ -1.01
SHMT2-233ENST00000557529 TMEM101Q96IK0 257 aa8.73□□□□□ -1.01
SHMT2-233ENST00000557529 A0A0J9YY99 117 aa8.72□□□□□ -1.01
SHMT2-233ENST00000557529 HERVK_113P61574 105 aa8.72□□□□□ -1.01
SHMT2-233ENST00000557529 MRPL23Q16540 153 aaKnown RBP8.72□□□□□ -1.01
SHMT2-233ENST00000557529 Q6ZUT4 128 aa8.72□□□□□ -1.01
SHMT2-233ENST00000557529 TM2D3Q9BRN9 247 aa8.72□□□□□ -1.01
SHMT2-233ENST00000557529 CHAC1Q9BUX1 264 aa8.72□□□□□ -1.01
SHMT2-233ENST00000557529 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
SHMT2-233ENST00000557529 DNAH3Q8TD57 4116 aa8.71□□□□□ -1.02
SHMT2-233ENST00000557529 A0A0J9YWU9 116 aa8.71□□□□□ -1.02
SHMT2-233ENST00000557529 LURAP1LQ8IV03 231 aa8.71□□□□□ -1.02
SHMT2-233ENST00000557529 BOD1L2Q8IYS8 172 aa8.71□□□□□ -1.02
SHMT2-233ENST00000557529 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.02
SHMT2-233ENST00000557529 ICOSQ9Y6W8 199 aa8.71□□□□□ -1.02
SHMT2-233ENST00000557529 NOTCH1P46531 2555 aa8.71□□□□□ -1.02
SHMT2-233ENST00000557529 A0A0J9YXV3 536 aa8.7□□□□□ -1.02
SHMT2-233ENST00000557529 E9PLD3 99 aa8.7□□□□□ -1.02
SHMT2-233ENST00000557529 TCTAP57738 103 aa8.7□□□□□ -1.02
SHMT2-233ENST00000557529 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
SHMT2-233ENST00000557529 MGAM2Q2M2H8 2515 aa8.69□□□□□ -1.02
SHMT2-233ENST00000557529 IGKV2D-26A0A0A0MRZ7 120 aa8.69□□□□□ -1.02
SHMT2-233ENST00000557529 H3BNG1 76 aa8.69□□□□□ -1.02
SHMT2-233ENST00000557529 SEC11AP67812 179 aa8.69□□□□□ -1.02
SHMT2-233ENST00000557529 CTAG1AP78358 180 aa8.69□□□□□ -1.02
SHMT2-233ENST00000557529 GAGE6Q13070 117 aa8.69□□□□□ -1.02
SHMT2-233ENST00000557529 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
SHMT2-233ENST00000557529 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
SHMT2-233ENST00000557529 CDC42SE2Q9NRR3 84 aa8.69□□□□□ -1.02
SHMT2-233ENST00000557529 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
SHMT2-233ENST00000557529 M0R143 59 aa8.68□□□□□ -1.02
SHMT2-233ENST00000557529 SIVA1O15304 175 aa8.68□□□□□ -1.02
SHMT2-233ENST00000557529 UBE2D1P51668 147 aa8.68□□□□□ -1.02
SHMT2-233ENST00000557529 PCP2Q8IVA1 136 aa8.68□□□□□ -1.02
SHMT2-233ENST00000557529 MRAPQ8TCY5 172 aa8.68□□□□□ -1.02
SHMT2-233ENST00000557529 NBEAL1Q6ZS30 2694 aa8.67□□□□□ -1.02
SHMT2-233ENST00000557529 A0A096LPF7 62 aa8.67□□□□□ -1.02
SHMT2-233ENST00000557529 ZNF22P17026 224 aaPredicted RBP8.67□□□□□ -1.02
SHMT2-233ENST00000557529 Q6ZTC4 211 aa8.67□□□□□ -1.02
SHMT2-233ENST00000557529 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
SHMT2-233ENST00000557529 TRAV8-6A0A0B4J262 113 aa8.66□□□□□ -1.02
SHMT2-233ENST00000557529 TIRAPP58753 221 aa8.66□□□□□ -1.02
SHMT2-233ENST00000557529 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
SHMT2-233ENST00000557529 A0A1B0GUV1 79 aa8.65□□□□□ -1.02
SHMT2-233ENST00000557529 TMEM223A0PJW6 202 aa8.65□□□□□ -1.02
SHMT2-233ENST00000557529 HERVK_113P63121 156 aa8.65□□□□□ -1.02
SHMT2-233ENST00000557529 LBHQ53QV2 105 aaPredicted RBP8.65□□□□□ -1.02
SHMT2-233ENST00000557529 C2orf91Q6ZV80 131 aa8.65□□□□□ -1.02
SHMT2-233ENST00000557529 TP73-AS1Q9UF72 201 aa8.65□□□□□ -1.02
SHMT2-233ENST00000557529 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
SHMT2-233ENST00000557529 TMEM262E9PQX1 116 aa8.64□□□□□ -1.03
SHMT2-233ENST00000557529 H3BRM9 83 aa8.64□□□□□ -1.03
SHMT2-233ENST00000557529 NANOS2P60321 138 aaKnown RBP8.64□□□□□ -1.03
SHMT2-233ENST00000557529 LELP1Q5T871 98 aa8.64□□□□□ -1.03
SHMT2-233ENST00000557529 LINC00469Q8N7U9 141 aa8.64□□□□□ -1.03
SHMT2-233ENST00000557529 PLEKHB2Q96CS7 222 aa8.64□□□□□ -1.03
SHMT2-233ENST00000557529 HIGD1BQ9P298 99 aa8.64□□□□□ -1.03
SHMT2-233ENST00000557529 DEFB131BA0A096LNP1 70 aa8.63□□□□□ -1.03
SHMT2-233ENST00000557529 MYMXA0A1B0GTQ4 84 aa8.63□□□□□ -1.03
SHMT2-233ENST00000557529 LEPROTO15243 131 aa8.63□□□□□ -1.03
SHMT2-233ENST00000557529 SNHG12Q9BXW3 62 aa8.63□□□□□ -1.03
SHMT2-233ENST00000557529 IGLV4-60A0A075B6I1 120 aa8.62□□□□□ -1.03
SHMT2-233ENST00000557529 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
SHMT2-233ENST00000557529 TRAV13-1A0A0B4J241 112 aa8.62□□□□□ -1.03
SHMT2-233ENST00000557529 EREGO14944 169 aa8.62□□□□□ -1.03
SHMT2-233ENST00000557529 RBX1P62877 108 aa8.62□□□□□ -1.03
SHMT2-233ENST00000557529 KRTAP21-3Q3LHN1 58 aa8.62□□□□□ -1.03
SHMT2-233ENST00000557529 LINC00242Q5T6M2 205 aa8.62□□□□□ -1.03
SHMT2-233ENST00000557529 MAPKAPK5-AS1Q8N8E1 139 aa8.62□□□□□ -1.03
SHMT2-233ENST00000557529 TTTY13Q9BZ97 58 aa8.62□□□□□ -1.03
SHMT2-233ENST00000557529 J3QQQ9 107 aa8.61□□□□□ -1.03
SHMT2-233ENST00000557529 LGALS3P17931 250 aaKnown RBP8.61□□□□□ -1.03
SHMT2-233ENST00000557529 B9D2Q9BPU9 175 aa8.61□□□□□ -1.03
SHMT2-233ENST00000557529 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
SHMT2-233ENST00000557529 ZNF815PA8K554 130 aa8.61□□□□□ -1.03
SHMT2-233ENST00000557529 HSD52Q0P140 79 aa8.61□□□□□ -1.03
SHMT2-233ENST00000557529 MPV17L2Q567V2 206 aa8.61□□□□□ -1.03
SHMT2-233ENST00000557529 LYPD5Q6UWN5 251 aa8.61□□□□□ -1.03
SHMT2-233ENST00000557529 CDKN2A-AS1Q9UH64 79 aa8.61□□□□□ -1.03
SHMT2-233ENST00000557529 CCL25O15444 150 aa8.6□□□□□ -1.03
SHMT2-233ENST00000557529 HINT1P49773 126 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-233ENST00000557529 BATFQ16520 125 aa8.6□□□□□ -1.03
SHMT2-233ENST00000557529 SPINK8P0C7L1 97 aa8.59□□□□□ -1.03
SHMT2-233ENST00000557529 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
SHMT2-233ENST00000557529 TSPEAR-AS2P59090 65 aa8.59□□□□□ -1.03
SHMT2-233ENST00000557529 COX6A2Q02221 97 aa8.59□□□□□ -1.03
SHMT2-233ENST00000557529 TENM3Q9P273 2699 aa8.58□□□□□ -1.04
SHMT2-233ENST00000557529 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
SHMT2-233ENST00000557529 TAL2Q16559 108 aa8.58□□□□□ -1.04
SHMT2-233ENST00000557529 BVES-AS1Q5T3Y7 98 aa8.58□□□□□ -1.04
SHMT2-233ENST00000557529 SCGB1D4Q6XE38 83 aa8.58□□□□□ -1.04
SHMT2-233ENST00000557529 C15orf53Q8NAA6 179 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms