RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
VRTN-202ENST00000557177 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
VRTN-202ENST00000557177 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
VRTN-202ENST00000557177 CTRLP40313 264 aa9.09□□□□□ -0.95
VRTN-202ENST00000557177 GAGE12HA6NDE8 117 aa9.08□□□□□ -0.96
VRTN-202ENST00000557177 COX6A2Q02221 97 aa9.08□□□□□ -0.96
VRTN-202ENST00000557177 CFAP161Q6P656 301 aa9.08□□□□□ -0.96
VRTN-202ENST00000557177 CNFNQ9BYD5 112 aa9.08□□□□□ -0.96
VRTN-202ENST00000557177 C1orf196B1AJZ1 125 aa9.07□□□□□ -0.96
VRTN-202ENST00000557177 RPS10P46783 165 aaKnown RBP9.07□□□□□ -0.96
VRTN-202ENST00000557177 GATD1Q8NB37 220 aa9.07□□□□□ -0.96
VRTN-202ENST00000557177 C7orf33Q8WU49 177 aa9.07□□□□□ -0.96
VRTN-202ENST00000557177 V9GYV3 84 aa9.07□□□□□ -0.96
VRTN-202ENST00000557177 RAB5BP61020 215 aa9.06□□□□□ -0.96
VRTN-202ENST00000557177 HIGD2BQ4VC39 106 aa9.06□□□□□ -0.96
VRTN-202ENST00000557177 CT83Q5H943 113 aa9.06□□□□□ -0.96
VRTN-202ENST00000557177 PRSS3P2Q8NHM4 247 aa9.06□□□□□ -0.96
VRTN-202ENST00000557177 GVQW2A0A096LPI5 108 aaPredicted RBP9.05□□□□□ -0.96
VRTN-202ENST00000557177 TGIF2-C20orf24A0A0A6YYL0 155 aa9.05□□□□□ -0.96
VRTN-202ENST00000557177 TRAV26-2A0A0B4J265 109 aa9.05□□□□□ -0.96
VRTN-202ENST00000557177 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
VRTN-202ENST00000557177 PRR3P79522 188 aaKnown RBP9.05□□□□□ -0.96
VRTN-202ENST00000557177 NUDT10Q8NFP7 164 aa9.05□□□□□ -0.96
VRTN-202ENST00000557177 CHCHD10Q8WYQ3 142 aaPredicted RBP9.05□□□□□ -0.96
VRTN-202ENST00000557177 NUDT11Q96G61 164 aa9.05□□□□□ -0.96
VRTN-202ENST00000557177 LINC01600Q96MT4 127 aa9.05□□□□□ -0.96
VRTN-202ENST00000557177 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
VRTN-202ENST00000557177 SMIM27A0A1W2PRY6 76 aa9.04□□□□□ -0.96
VRTN-202ENST00000557177 NCR2O95944 276 aa9.04□□□□□ -0.96
VRTN-202ENST00000557177 TWIST1Q15672 202 aa9.04□□□□□ -0.96
VRTN-202ENST00000557177 MAJINQ3KP22 176 aa9.04□□□□□ -0.96
VRTN-202ENST00000557177 COX19Q49B96 90 aa9.04□□□□□ -0.96
VRTN-202ENST00000557177 LOC105371267A0A1B0GV96 52 aa9.03□□□□□ -0.96
VRTN-202ENST00000557177 FAM231BA6NCW3 169 aa9.03□□□□□ -0.96
VRTN-202ENST00000557177 H7C423 109 aa9.03□□□□□ -0.96
VRTN-202ENST00000557177 STPG4Q8N801 248 aa9.03□□□□□ -0.96
VRTN-202ENST00000557177 GTSF1Q8WW33 167 aa9.03□□□□□ -0.96
VRTN-202ENST00000557177 RPL39LQ96EH5 51 aaKnown RBP9.03□□□□□ -0.96
VRTN-202ENST00000557177 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.02□□□□□ -0.97
VRTN-202ENST00000557177 A0A096LNI7 61 aa9.02□□□□□ -0.97
VRTN-202ENST00000557177 IGKV2-29A2NJV5 120 aaPredicted RBP9.02□□□□□ -0.97
VRTN-202ENST00000557177 GATCO43716 136 aaKnown RBP9.02□□□□□ -0.97
VRTN-202ENST00000557177 FOXI1Q12951 378 aa9.02□□□□□ -0.97
VRTN-202ENST00000557177 AMMECR1LQ6DCA0 310 aa9.02□□□□□ -0.97
VRTN-202ENST00000557177 RPP21Q9H633 154 aaKnown RBP9.02□□□□□ -0.97
VRTN-202ENST00000557177 APCSP02743 223 aa9.01□□□□□ -0.97
VRTN-202ENST00000557177 FGF6P10767 208 aa9.01□□□□□ -0.97
VRTN-202ENST00000557177 RNASEKQ6P5S7 137 aaKnown RBP9.01□□□□□ -0.97
VRTN-202ENST00000557177 RNASE7Q9H1E1 156 aaKnown RBP9.01□□□□□ -0.97
VRTN-202ENST00000557177 FOXA3P55318 350 aaPredicted RBP9□□□□□ -0.97
VRTN-202ENST00000557177 OR5A1Q8NGJ0 315 aa9□□□□□ -0.97
VRTN-202ENST00000557177 TSKUQ8WUA8 353 aa9□□□□□ -0.97
VRTN-202ENST00000557177 SDHAF1A6NFY7 115 aa8.99□□□□□ -0.97
VRTN-202ENST00000557177 A8MWL6 223 aa8.99□□□□□ -0.97
VRTN-202ENST00000557177 ZNF25P17030 456 aaPredicted RBP8.99□□□□□ -0.97
VRTN-202ENST00000557177 ODF1Q14990 250 aa8.99□□□□□ -0.97
VRTN-202ENST00000557177 LINC00474Q9P2X8 69 aa8.99□□□□□ -0.97
VRTN-202ENST00000557177 A0A0J9YXV3 536 aa8.98□□□□□ -0.97
VRTN-202ENST00000557177 MT-ND6P03923 174 aa8.98□□□□□ -0.97
VRTN-202ENST00000557177 TRGC2P03986 189 aa8.98□□□□□ -0.97
VRTN-202ENST00000557177 ATP5L2Q7Z4Y8 100 aa8.98□□□□□ -0.97
VRTN-202ENST00000557177 NAT8BQ9UHF3 227 aa8.98□□□□□ -0.97
VRTN-202ENST00000557177 TRBV6-5A0A0K0K1A5 114 aa8.97□□□□□ -0.97
VRTN-202ENST00000557177 LINC00959A0A1B0GUT2 108 aa8.97□□□□□ -0.97
VRTN-202ENST00000557177 I3L3M4 83 aa8.97□□□□□ -0.97
VRTN-202ENST00000557177 XCL1P47992 114 aa8.97□□□□□ -0.97
VRTN-202ENST00000557177 KRTAP10-8P60410 259 aa8.97□□□□□ -0.97
VRTN-202ENST00000557177 SPINK6Q6UWN8 80 aa8.97□□□□□ -0.97
VRTN-202ENST00000557177 SMIM15Q7Z3B0 74 aa8.97□□□□□ -0.97
VRTN-202ENST00000557177 GNB1LQ9BYB4 327 aa8.97□□□□□ -0.97
VRTN-202ENST00000557177 IGHV1-58A0A0C4DH39 117 aa8.96□□□□□ -0.98
VRTN-202ENST00000557177 C5orf52A6NGY3 159 aa8.96□□□□□ -0.98
VRTN-202ENST00000557177 CCL25O15444 150 aa8.96□□□□□ -0.98
VRTN-202ENST00000557177 S100A6P06703 90 aa8.96□□□□□ -0.98
VRTN-202ENST00000557177 ESDP10768 282 aa8.96□□□□□ -0.98
VRTN-202ENST00000557177 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
VRTN-202ENST00000557177 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
VRTN-202ENST00000557177 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 TSHBP01222 138 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 SRSF9Q13242 221 aaKnown RBP eCLIP8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 COA6Q5JTJ3 125 aaKnown RBP8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 TMEM101Q96IK0 257 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 CARD19Q96LW7 228 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST1H2BNQ99877 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 HIST1H2BMQ99879 126 aa8.95□□□□□ -0.98
VRTN-202ENST00000557177 GAS8-AS1O95177 125 aa8.94□□□□□ -0.98
VRTN-202ENST00000557177 PMCHP20382 165 aa8.94□□□□□ -0.98
VRTN-202ENST00000557177 REG3GQ6UW15 175 aa8.94□□□□□ -0.98
VRTN-202ENST00000557177 MRPL52Q86TS9 123 aaKnown RBP8.94□□□□□ -0.98
VRTN-202ENST00000557177 NUP35Q8NFH5 326 aa8.94□□□□□ -0.98
VRTN-202ENST00000557177 TRAPPC1Q9Y5R8 145 aa8.94□□□□□ -0.98
VRTN-202ENST00000557177 A0A1B0GW15 77 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms