RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 KRTAP26-1Q6PEX3 210 aa11.24□□□□□ -0.61
PSEN1-217ENST00000556533 RAB5AP20339 215 aa11.23□□□□□ -0.61
PSEN1-217ENST00000556533 MAP1LC3AQ9H492 121 aa11.23□□□□□ -0.61
PSEN1-217ENST00000556533 GAGE12HA6NDE8 117 aa11.22□□□□□ -0.61
PSEN1-217ENST00000556533 SMAGPQ0VAQ4 97 aa11.22□□□□□ -0.61
PSEN1-217ENST00000556533 KIAA1644Q3SXP7 199 aa11.22□□□□□ -0.61
PSEN1-217ENST00000556533 C14orf177Q52M58 125 aa11.22□□□□□ -0.61
PSEN1-217ENST00000556533 MRPL52Q86TS9 123 aaKnown RBP11.22□□□□□ -0.61
PSEN1-217ENST00000556533 ZNF664Q8N3J9 261 aa11.22□□□□□ -0.61
PSEN1-217ENST00000556533 TMEM18Q96B42 140 aa11.22□□□□□ -0.61
PSEN1-217ENST00000556533 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.61
PSEN1-217ENST00000556533 DNAH5Q8TE73 4624 aa11.21□□□□□ -0.61
PSEN1-217ENST00000556533 SVBPQ8N300 66 aa11.21□□□□□ -0.61
PSEN1-217ENST00000556533 CHCHD10Q8WYQ3 142 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-217ENST00000556533 CDC42SE2Q9NRR3 84 aa11.21□□□□□ -0.61
PSEN1-217ENST00000556533 LAMTOR2Q9Y2Q5 125 aa11.21□□□□□ -0.61
PSEN1-217ENST00000556533 HERC2O95714 4834 aa11.21□□□□□ -0.62
PSEN1-217ENST00000556533 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
PSEN1-217ENST00000556533 SNAPINO95295 136 aa11.2□□□□□ -0.62
PSEN1-217ENST00000556533 RPL39P62891 51 aaKnown RBP11.2□□□□□ -0.62
PSEN1-217ENST00000556533 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
PSEN1-217ENST00000556533 UBE2D4Q9Y2X8 147 aa11.2□□□□□ -0.62
PSEN1-217ENST00000556533 LINC00959A0A1B0GUT2 108 aa11.19□□□□□ -0.62
PSEN1-217ENST00000556533 XCL1P47992 114 aa11.19□□□□□ -0.62
PSEN1-217ENST00000556533 LINC01620Q4KN68 170 aa11.19□□□□□ -0.62
PSEN1-217ENST00000556533 PRSS1P07477 247 aa11.18□□□□□ -0.62
PSEN1-217ENST00000556533 SS18Q15532 418 aa11.18□□□□□ -0.62
PSEN1-217ENST00000556533 SLC7A5P1Q8MH63 180 aa11.18□□□□□ -0.62
PSEN1-217ENST00000556533 GNB1LQ9BYB4 327 aa11.18□□□□□ -0.62
PSEN1-217ENST00000556533 CCL25O15444 150 aa11.17□□□□□ -0.62
PSEN1-217ENST00000556533 Q8N8P6 123 aa11.17□□□□□ -0.62
PSEN1-217ENST00000556533 RYR1P21817 5038 aa11.17□□□□□ -0.62
PSEN1-217ENST00000556533 TGIF2-C20orf24A0A0A6YYL0 155 aa11.16□□□□□ -0.62
PSEN1-217ENST00000556533 hDV102S1A0JD36 115 aa11.16□□□□□ -0.62
PSEN1-217ENST00000556533 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
PSEN1-217ENST00000556533 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
PSEN1-217ENST00000556533 Q6ZUT4 128 aa11.16□□□□□ -0.62
PSEN1-217ENST00000556533 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
PSEN1-217ENST00000556533 TIMM21Q9BVV7 248 aa11.16□□□□□ -0.62
PSEN1-217ENST00000556533 CSDC2Q9Y534 153 aaKnown RBP11.16□□□□□ -0.62
PSEN1-217ENST00000556533 IFI27P40305 119 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-217ENST00000556533 COX19Q49B96 90 aa11.15□□□□□ -0.62
PSEN1-217ENST00000556533 MRPL18Q9H0U6 180 aaKnown RBP11.15□□□□□ -0.62
PSEN1-217ENST00000556533 SPANXA1Q9NS26 97 aa11.15□□□□□ -0.62
PSEN1-217ENST00000556533 TRAV13-1A0A0B4J241 112 aa11.14□□□□□ -0.63
PSEN1-217ENST00000556533 HAMPP81172 84 aa11.14□□□□□ -0.63
PSEN1-217ENST00000556533 FOXI1Q12951 378 aa11.14□□□□□ -0.63
PSEN1-217ENST00000556533 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
PSEN1-217ENST00000556533 NXT2Q9NPJ8 142 aaKnown RBP11.13□□□□□ -0.63
PSEN1-217ENST00000556533 C1orf196B1AJZ1 125 aa11.12□□□□□ -0.63
PSEN1-217ENST00000556533 MT-ND6P03923 174 aa11.12□□□□□ -0.63
PSEN1-217ENST00000556533 XGP55808 180 aa11.12□□□□□ -0.63
PSEN1-217ENST00000556533 HIGD2BQ4VC39 106 aa11.12□□□□□ -0.63
PSEN1-217ENST00000556533 PRSS3P2Q8NHM4 247 aa11.12□□□□□ -0.63
PSEN1-217ENST00000556533 ALKBH7Q9BT30 221 aaPredicted RBP11.12□□□□□ -0.63
PSEN1-217ENST00000556533 AP5S1Q9NUS5 200 aa11.12□□□□□ -0.63
PSEN1-217ENST00000556533 FAM30AQ9NZY2 134 aa11.12□□□□□ -0.63
PSEN1-217ENST00000556533 APOBP04114 4563 aaKnown RBP11.11□□□□□ -0.63
PSEN1-217ENST00000556533 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
PSEN1-217ENST00000556533 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
PSEN1-217ENST00000556533 TRAPPC1Q9Y5R8 145 aa11.11□□□□□ -0.63
PSEN1-217ENST00000556533 C15orf56Q8N910 161 aa11.1□□□□□ -0.63
PSEN1-217ENST00000556533 CYSLTR1Q9Y271 337 aa11.1□□□□□ -0.63
PSEN1-217ENST00000556533 IFITM10A6NMD0 228 aa11.09□□□□□ -0.63
PSEN1-217ENST00000556533 MRPS36P82909 103 aaKnown RBP11.09□□□□□ -0.63
PSEN1-217ENST00000556533 C2orf66Q6UXQ4 117 aa11.09□□□□□ -0.63
PSEN1-217ENST00000556533 FAM104AQ969W3 186 aa11.09□□□□□ -0.63
PSEN1-217ENST00000556533 HSPG2P98160 4391 aa11.08□□□□□ -0.64
PSEN1-217ENST00000556533 K7EMI3 77 aa11.08□□□□□ -0.64
PSEN1-217ENST00000556533 KRTAP17-1Q9BYP8 105 aa11.08□□□□□ -0.64
PSEN1-217ENST00000556533 COX7A2LO14548 114 aa11.07□□□□□ -0.64
PSEN1-217ENST00000556533 MALP21145 153 aa11.07□□□□□ -0.64
PSEN1-217ENST00000556533 PYGO1Q9Y3Y4 419 aa11.07□□□□□ -0.64
PSEN1-217ENST00000556533 IGLV4-3A0A075B6K6 122 aa11.06□□□□□ -0.64
PSEN1-217ENST00000556533 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-217ENST00000556533 IGHV1-58A0A0C4DH39 117 aa11.06□□□□□ -0.64
PSEN1-217ENST00000556533 SMR3BP02814 79 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-217ENST00000556533 SLPIP03973 132 aa11.06□□□□□ -0.64
PSEN1-217ENST00000556533 CNBPP62633 177 aaKnown RBP11.06□□□□□ -0.64
PSEN1-217ENST00000556533 C5orf38Q86SI9 138 aa11.06□□□□□ -0.64
PSEN1-217ENST00000556533 C9orf163Q8N9P6 203 aa11.06□□□□□ -0.64
PSEN1-217ENST00000556533 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
PSEN1-217ENST00000556533 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
PSEN1-217ENST00000556533 G0S2P27469 103 aa11.05□□□□□ -0.64
PSEN1-217ENST00000556533 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
PSEN1-217ENST00000556533 FA2HQ7L5A8 372 aa11.05□□□□□ -0.64
PSEN1-217ENST00000556533 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
PSEN1-217ENST00000556533 Q8N1X5 172 aa11.05□□□□□ -0.64
PSEN1-217ENST00000556533 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
PSEN1-217ENST00000556533 GVQW2A0A096LPI5 108 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-217ENST00000556533 Q6ZN92 141 aa11.04□□□□□ -0.64
PSEN1-217ENST00000556533 TEX43Q6ZNM6 134 aa11.04□□□□□ -0.64
PSEN1-217ENST00000556533 VCX2Q9H322 139 aa11.04□□□□□ -0.64
PSEN1-217ENST00000556533 IGHV3-64A0A075B6Q5 118 aa11.03□□□□□ -0.64
PSEN1-217ENST00000556533 ZNF561-AS1K7EIQ3 104 aa11.03□□□□□ -0.64
PSEN1-217ENST00000556533 Q6ZSA8 131 aa11.03□□□□□ -0.64
PSEN1-217ENST00000556533 YPEL4Q96NS1 127 aa11.03□□□□□ -0.64
PSEN1-217ENST00000556533 KRTAP4-5Q9BYR2 181 aa11.03□□□□□ -0.64
PSEN1-217ENST00000556533 IGIPA6NJ69 53 aa11.02□□□□□ -0.65
PSEN1-217ENST00000556533 TOMM6Q96B49 74 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms