RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 A6NN06 94 aa0.86□□□□□ -2.27
CDKN3-210ENST00000556305 IFITM5A6NNB3 132 aa0.86□□□□□ -2.27
CDKN3-210ENST00000556305 GYPBP06028 91 aa0.86□□□□□ -2.27
CDKN3-210ENST00000556305 CRYGSP22914 178 aa0.86□□□□□ -2.27
CDKN3-210ENST00000556305 RPL37AP61513 92 aaKnown RBP0.86□□□□□ -2.27
CDKN3-210ENST00000556305 SPATA8Q6RVD6 105 aa0.86□□□□□ -2.27
CDKN3-210ENST00000556305 Q6ZS92 163 aa0.86□□□□□ -2.27
CDKN3-210ENST00000556305 ARL17AQ8IVW1 177 aa0.86□□□□□ -2.27
CDKN3-210ENST00000556305 C19orf12Q9NSK7 152 aa0.86□□□□□ -2.27
CDKN3-210ENST00000556305 HSPB11Q9Y547 144 aa0.86□□□□□ -2.27
CDKN3-210ENST00000556305 APOBP04114 4563 aaKnown RBP0.86□□□□□ -2.27
CDKN3-210ENST00000556305 KNTC1P50748 2209 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 HRNRQ86YZ3 2850 aaPredicted RBP0.85□□□□□ -2.27
CDKN3-210ENST00000556305 VPS13DQ5THJ4 4388 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 LOC107984640A0A0U1RRK4 108 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 A0A1W2PPB8 328 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 A0A1W2PRS3 328 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 NUPR2A6NF83 97 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 KIR3DP1A8MWS1 328 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 SNRPD3P62318 126 aaKnown RBP0.85□□□□□ -2.27
CDKN3-210ENST00000556305 Q86TA4 180 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 CCDC115Q96NT0 180 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 NABP2Q9BQ15 211 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 LIMD2Q9BT23 127 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 SPANXA1Q9NS26 97 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 CBLN4Q9NTU7 201 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 FKBP11Q9NYL4 201 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 DNAH5Q8TE73 4624 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 F5P12259 2224 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 STARD9Q9P2P6 4700 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 DNAH6Q9C0G6 4158 aa0.85□□□□□ -2.27
CDKN3-210ENST00000556305 H0YJX3 145 aa0.84□□□□□ -2.27
CDKN3-210ENST00000556305 K7EIL1 84 aa0.84□□□□□ -2.27
CDKN3-210ENST00000556305 RPL7P18124 248 aaKnown RBP0.84□□□□□ -2.27
CDKN3-210ENST00000556305 RPL22P35268 128 aaKnown RBP0.84□□□□□ -2.27
CDKN3-210ENST00000556305 GTF2A1P52655 376 aaPredicted RBP0.84□□□□□ -2.27
CDKN3-210ENST00000556305 BLCAPP62952 87 aa0.84□□□□□ -2.27
CDKN3-210ENST00000556305 OR8J3Q8NGG0 315 aa0.84□□□□□ -2.27
CDKN3-210ENST00000556305 OR5A2Q8NGI9 324 aa0.84□□□□□ -2.27
CDKN3-210ENST00000556305 OR51A4Q8NGJ6 313 aa0.84□□□□□ -2.27
CDKN3-210ENST00000556305 SMIM7Q9BQ49 75 aa0.84□□□□□ -2.27
CDKN3-210ENST00000556305 LPAR5Q9H1C0 372 aa0.84□□□□□ -2.27
CDKN3-210ENST00000556305 SPANXCQ9NY87 97 aa0.84□□□□□ -2.27
CDKN3-210ENST00000556305 ANKRD30AQ9BXX3 1397 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 ESPL1Q14674 2120 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 GNG14A0A1W2PPG7 69 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 SLC25A4P12235 298 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 CCL4P13236 92 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 RPS3P23396 243 aaKnown RBP eCLIP0.83□□□□□ -2.28
CDKN3-210ENST00000556305 RPS28P62857 69 aaKnown RBP0.83□□□□□ -2.28
CDKN3-210ENST00000556305 BRK1Q8WUW1 75 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 CCL19Q99731 98 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 JPT1Q9UK76 154 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 MYH1P12882 1939 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 ANKRD36BQ8N2N9 1353 aa0.83□□□□□ -2.28
CDKN3-210ENST00000556305 CPSF1Q10570 1443 aaKnown RBP0.82□□□□□ -2.28
CDKN3-210ENST00000556305 CEP162Q5TB80 1403 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 TMEM189A5PLL7 270 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 PRORSD1PA6NEY8 169 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 UQCRQO14949 82 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 EDF1O60869 148 aaKnown RBP0.82□□□□□ -2.28
CDKN3-210ENST00000556305 HBDP02042 147 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 CKS2P33552 79 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 SPINT3P49223 89 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 CAV3P56539 151 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 B2MP61769 119 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 PSPHP78330 225 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 NAT14Q8WUY8 206 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 PATJQ8NI35 1801 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 ANK1P16157 1881 aa0.82□□□□□ -2.28
CDKN3-210ENST00000556305 ANKRD50Q9ULJ7 1429 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 PNMA8CA0A1B0GUJ8 204 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 M0QZK8 103 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 PIN1P1O15428 100 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 KDELR1P24390 212 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 ZNF137PP52743 207 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 ASB16-AS1Q495Z4 193 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 XAF1Q6GPH4 301 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 MRPL40Q9NQ50 206 aaKnown RBP0.81□□□□□ -2.28
CDKN3-210ENST00000556305 GINS2Q9Y248 185 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 NDUFAF1Q9Y375 327 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 DSPPQ9NZW4 1301 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 CPDO75976 1380 aa0.81□□□□□ -2.28
CDKN3-210ENST00000556305 ARFGEF2Q9Y6D5 1785 aa0.8□□□□□ -2.28
CDKN3-210ENST00000556305 DNAH3Q8TD57 4116 aa0.8□□□□□ -2.28
CDKN3-210ENST00000556305 KIAA1549LQ6ZVL6 1849 aa0.8□□□□□ -2.28
CDKN3-210ENST00000556305 J3KT08 172 aa0.8□□□□□ -2.28
CDKN3-210ENST00000556305 IDO2Q6ZQW0 420 aa0.8□□□□□ -2.28
CDKN3-210ENST00000556305 OR8I2Q8N0Y5 310 aa0.8□□□□□ -2.28
CDKN3-210ENST00000556305 C10orf95Q9H7T3 257 aa0.8□□□□□ -2.28
CDKN3-210ENST00000556305 MRPL35Q9NZE8 188 aaKnown RBP0.8□□□□□ -2.28
CDKN3-210ENST00000556305 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
CDKN3-210ENST00000556305 ATG2AQ2TAZ0 1938 aa0.79□□□□□ -2.28
CDKN3-210ENST00000556305 TMEM30CPA0ZSE6 113 aa0.79□□□□□ -2.28
CDKN3-210ENST00000556305 DPM2O94777 84 aa0.79□□□□□ -2.28
CDKN3-210ENST00000556305 HIST1H1BP16401 226 aaKnown RBP0.79□□□□□ -2.28
CDKN3-210ENST00000556305 QRFPP83859 136 aa0.79□□□□□ -2.28
CDKN3-210ENST00000556305 DR1Q01658 176 aa0.79□□□□□ -2.28
CDKN3-210ENST00000556305 RHOHQ15669 191 aa0.79□□□□□ -2.28
CDKN3-210ENST00000556305 MRPL36Q9P0J6 103 aaKnown RBP0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms