RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 H3BVH4 76 aa2.83□□□□□ -1.96
LINC00648-202ENST00000555985 PRB4P10163 310 aaPredicted RBP2.83□□□□□ -1.96
LINC00648-202ENST00000555985 CRIP1P50238 77 aa2.83□□□□□ -1.96
LINC00648-202ENST00000555985 SFTA2Q6UW10 78 aa2.83□□□□□ -1.96
LINC00648-202ENST00000555985 LYZL1Q6UWQ5 148 aa2.83□□□□□ -1.96
LINC00648-202ENST00000555985 KRTAP19-1Q8IUB9 90 aa2.83□□□□□ -1.96
LINC00648-202ENST00000555985 C15orf53Q8NAA6 179 aa2.83□□□□□ -1.96
LINC00648-202ENST00000555985 ODF3Q96PU9 254 aa2.83□□□□□ -1.96
LINC00648-202ENST00000555985 C11orf68Q9H3H3 251 aaKnown RBP2.83□□□□□ -1.96
LINC00648-202ENST00000555985 X6R8D5 127 aa2.83□□□□□ -1.96
LINC00648-202ENST00000555985 SLC25A20O43772 301 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 CASC10Q5T4H9 136 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 GOLT1AQ6ZVE7 132 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 SLC25A39Q9BZJ4 359 aaPredicted RBP2.82□□□□□ -1.96
LINC00648-202ENST00000555985 OTORQ9NRC9 128 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 DNAH17Q9UFH2 4485 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 LOC107984640A0A0U1RRK4 108 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 H3BMM0 161 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 H3BTX0 84 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 DUSP14O95147 198 aaKnown RBP2.82□□□□□ -1.96
LINC00648-202ENST00000555985 ORM2P19652 201 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 APOC4P55056 127 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 MRPL23Q16540 153 aaKnown RBP2.82□□□□□ -1.96
LINC00648-202ENST00000555985 FAM19A5Q7Z5A7 132 aaPredicted RBP2.82□□□□□ -1.96
LINC00648-202ENST00000555985 Q8NAQ8 132 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 AAMDCQ9H7C9 122 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 NXT2Q9NPJ8 142 aaKnown RBP2.82□□□□□ -1.96
LINC00648-202ENST00000555985 NBEAL2Q6ZNJ1 2754 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 SPRY2O43597 315 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 RPL7P18124 248 aaKnown RBP2.82□□□□□ -1.96
LINC00648-202ENST00000555985 PLNP26678 52 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 DEFB131AP59861 70 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 TMEM75Q8N9X5 138 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 MUC7Q8TAX7 377 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 BAALCQ8WXS3 180 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 LINC01600Q96MT4 127 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 CHCHD5Q9BSY4 110 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 TMEM14CQ9P0S9 112 aa2.82□□□□□ -1.96
LINC00648-202ENST00000555985 TRAV8-4A0A0B4J246 113 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 A0A1B0GX51 115 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 C9JAW5 83 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 J3KT08 172 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 M0R2P5 195 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 LYZP61626 148 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 EXOC3-AS1Q8N2X6 119 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 IL17DQ8TAD2 202 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 NTN5Q8WTR8 489 aaPredicted RBP2.81□□□□□ -1.96
LINC00648-202ENST00000555985 RNF185Q96GF1 192 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 FAM19A4Q96LR4 140 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 HIGD1AQ9Y241 93 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 IGLV2-18A0A075B6J9 118 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 A0A0J9YX75 114 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 KNCNA6PVL3 124 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 RPL13AP40429 203 aaKnown RBP2.81□□□□□ -1.96
LINC00648-202ENST00000555985 SRSF9Q13242 221 aaKnown RBP eCLIP2.81□□□□□ -1.96
LINC00648-202ENST00000555985 C10orf126Q8N4M7 172 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 Q8N8P6 123 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 TMEM101Q96IK0 257 aa2.81□□□□□ -1.96
LINC00648-202ENST00000555985 TRAV12-1A0A0B4J245 112 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 TRBV7-7A0A0K0K1E9 115 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 F8VRH5 84 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 H7C1H1 209 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 GAS8-AS1O95177 125 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 CFC1BP0CG36 223 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 CFC1P0CG37 223 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 RBMY1A1P0DJD3 496 aaKnown RBP2.8□□□□□ -1.96
LINC00648-202ENST00000555985 RBMY1CP0DJD4 496 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 RPS28P62857 69 aaKnown RBP2.8□□□□□ -1.96
LINC00648-202ENST00000555985 RBMY1FQ15415 496 aaKnown RBP2.8□□□□□ -1.96
LINC00648-202ENST00000555985 PRADC1Q9BSG0 188 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 PKD1P98161 4303 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 EPPK1P58107 5090 aaKnown RBP2.8□□□□□ -1.96
LINC00648-202ENST00000555985 PLAC8L1A1L4L8 177 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 ZNF815PA8K554 130 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 DEFB1P60022 68 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 HERVK_113P63121 156 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 DEFB135Q30KP9 77 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 C9orf153Q5TBE3 101 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 C3orf22Q8N5N4 141 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 OR13C6PQ8NH95 151 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 PLEKHB2Q96CS7 222 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 C8orf49Q96NF6 230 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 TENM2Q9NT68 2774 aa2.8□□□□□ -1.96
LINC00648-202ENST00000555985 A0A0J9YWU9 116 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 TEX49A0A1B0GTD5 131 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 SH2D1AO60880 128 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 IGLC6P0CF74 106 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 RPL35AP18077 110 aaKnown RBP2.79□□□□□ -1.96
LINC00648-202ENST00000555985 HLA-DMBP28068 263 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 SNRPD3P62318 126 aaKnown RBP2.79□□□□□ -1.96
LINC00648-202ENST00000555985 LAGE3Q14657 143 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 SCGB1D4Q6XE38 83 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 C1orf158Q8N1D5 194 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 MRPL53Q96EL3 112 aaKnown RBP2.79□□□□□ -1.96
LINC00648-202ENST00000555985 SPANXCQ9NY87 97 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 PRO1854Q9UHT4 67 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 IGKV3-7A0A075B6H7 116 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 TRBV19A0A075B6N1 114 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 UQCRQO14949 82 aa2.79□□□□□ -1.96
LINC00648-202ENST00000555985 GATA1P15976 413 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms