RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 CST8O60676 142 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 BANF1O75531 89 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 IGLV1-51P01701 117 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 IGLV3-1P01715 115 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 IGHV3-33P01772 117 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 TRGC2P03986 189 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 ZNF25P17030 456 aaPredicted RBP0.41□□□□□ -2.34
NEK9-208ENST00000555961 GLRXP35754 106 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 PPP1R2P41236 205 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 RPL35P42766 123 aaKnown RBP0.41□□□□□ -2.34
NEK9-208ENST00000555961 SERPINB9P50453 376 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 FXYD6P3P58550 94 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 KRTAP19-2Q3LHN2 52 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 PATE2Q6UY27 113 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 ATOH7Q8N100 152 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 STAG3L4Q8TBR4 150 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 NEK7Q8TDX7 302 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 SKA2Q8WVK7 121 aaPredicted RBP0.41□□□□□ -2.34
NEK9-208ENST00000555961 ZNF714Q96N38 554 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 OR4C12Q96R67 309 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 OR2H1Q9GZK4 316 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 TMEM138Q9NPI0 162 aa0.41□□□□□ -2.34
NEK9-208ENST00000555961 DSPPQ9NZW4 1301 aa0.4□□□□□ -2.34
NEK9-208ENST00000555961 hDV103S1A0JD37 113 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 A6NN06 94 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 PPP5D1E7EU14 171 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 MRPL33O75394 65 aaKnown RBP0.4□□□□□ -2.35
NEK9-208ENST00000555961 CST7O76096 145 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 FAM107AO95990 144 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 PAEPP09466 180 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 HTN3P15516 51 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 MT4P47944 62 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 GNG5P63218 68 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 MRPS36P82909 103 aaKnown RBP0.4□□□□□ -2.35
NEK9-208ENST00000555961 INSL4Q14641 139 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 SPATA45Q537H7 98 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 C1orf140Q5VVS0 124 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 S100A7AQ86SG5 101 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 LRRC18Q8N456 261 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 STX19Q8N4C7 294 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 CHCHD1Q96BP2 118 aaKnown RBP0.4□□□□□ -2.35
NEK9-208ENST00000555961 SPRR2FQ96RM1 72 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 GPX7Q96SL4 187 aaPredicted RBP0.4□□□□□ -2.35
NEK9-208ENST00000555961 ATPIF1Q9UII2 106 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 LAMTOR2Q9Y2Q5 125 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 NUBP2Q9Y5Y2 271 aa0.4□□□□□ -2.35
NEK9-208ENST00000555961 PGRMC1O00264 195 aaKnown RBP0.39□□□□□ -2.35
NEK9-208ENST00000555961 RER1O15258 196 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 MFSD11O43934 449 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 DNAL4O96015 105 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 GYPAP02724 150 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 SDC4P31431 198 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 GNG3P63215 75 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 HBBP68871 147 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 RTL8BQ17RB0 113 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 ANGPTL5Q86XS5 388 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 Q8N6K4 173 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 OR4B1Q8NGF8 309 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 OR4K15Q8NH41 348 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 GRPEL2Q8TAA5 225 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 RAB37Q96AX2 223 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 DGCR14Q96DF8 476 aaKnown RBP0.39□□□□□ -2.35
NEK9-208ENST00000555961 TAS2R7Q9NYW3 318 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 HILPDAQ9Y5L2 63 aa0.39□□□□□ -2.35
NEK9-208ENST00000555961 A0A096LPI6 279 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 A0A0J9YY99 117 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 A0A1B0GW64 132 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 JMJD7-PLA2G4BH0Y9G9 81 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 MT2AP02795 61 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 TFF1P04155 84 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 MT1FP04733 61 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 IDO1P14902 403 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 SRP9P49458 86 aaKnown RBP0.38□□□□□ -2.35
NEK9-208ENST00000555961 TMBIM6P55061 237 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 FOXA3P55318 350 aaPredicted RBP0.38□□□□□ -2.35
NEK9-208ENST00000555961 NDUFA6P56556 154 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 SNRPFP62306 86 aaKnown RBP0.38□□□□□ -2.35
NEK9-208ENST00000555961 LSM3P62310 102 aaKnown RBP0.38□□□□□ -2.35
NEK9-208ENST00000555961 OR8B8Q15620 311 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 TRIQKQ629K1 86 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 C3orf33Q6P1S2 294 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 PRR15Q8IV56 129 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 FAM216BQ8N7L0 139 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 EFCAB11Q9BUY7 163 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 SNRNP25Q9BV90 132 aaKnown RBP0.38□□□□□ -2.35
NEK9-208ENST00000555961 CST11Q9H112 138 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 V9GYQ6 96 aa0.38□□□□□ -2.35
NEK9-208ENST00000555961 G3V318 75 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 M0R1W7 72 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 KPNA4O00629 521 aaPredicted RBP0.37□□□□□ -2.35
NEK9-208ENST00000555961 SAA1P0DJI8 122 aaPredicted RBP0.37□□□□□ -2.35
NEK9-208ENST00000555961 CCL3L1P16619 93 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 SERPINB1P30740 379 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 RPL22P35268 128 aaKnown RBP0.37□□□□□ -2.35
NEK9-208ENST00000555961 CCL18P55774 89 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 DEFA3P59666 94 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 DEFA5Q01523 94 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 WFDC2Q14508 124 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 ASB16-AS1Q495Z4 193 aa0.37□□□□□ -2.35
NEK9-208ENST00000555961 SPINK9Q5DT21 86 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms