RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 MEIG1Q5JSS6 88 aa12.95□□□□□ -0.34
RCCD1-204ENST00000555737 VSIG2Q96IQ7 327 aa12.95□□□□□ -0.34
RCCD1-204ENST00000555737 ODF3Q96PU9 254 aa12.95□□□□□ -0.34
RCCD1-204ENST00000555737 FAM110AQ9BQ89 295 aa12.95□□□□□ -0.34
RCCD1-204ENST00000555737 Q9H8V8 135 aa12.94□□□□□ -0.34
RCCD1-204ENST00000555737 MTORP42345 2549 aa12.94□□□□□ -0.34
RCCD1-204ENST00000555737 FAM104AQ969W3 186 aa12.94□□□□□ -0.34
RCCD1-204ENST00000555737 COX6A2Q02221 97 aa12.93□□□□□ -0.34
RCCD1-204ENST00000555737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.93□□□□□ -0.34
RCCD1-204ENST00000555737 CHCHD5Q9BSY4 110 aa12.93□□□□□ -0.34
RCCD1-204ENST00000555737 MIAQ16674 131 aa12.92□□□□□ -0.34
RCCD1-204ENST00000555737 RS1O15537 224 aa12.92□□□□□ -0.34
RCCD1-204ENST00000555737 A0A1W2PRX2 142 aa12.91□□□□□ -0.34
RCCD1-204ENST00000555737 MRPS36P82909 103 aaKnown RBP12.91□□□□□ -0.34
RCCD1-204ENST00000555737 TMEM61Q8N0U2 210 aa12.91□□□□□ -0.34
RCCD1-204ENST00000555737 TRBV30A0A0K0K1B3 111 aa12.91□□□□□ -0.34
RCCD1-204ENST00000555737 RBMY1BA6NDE4 496 aaKnown RBP12.91□□□□□ -0.34
RCCD1-204ENST00000555737 RBMY1EA6NEQ0 496 aaKnown RBP12.91□□□□□ -0.34
RCCD1-204ENST00000555737 RBMY1DP0C7P1 496 aaKnown RBP12.91□□□□□ -0.34
RCCD1-204ENST00000555737 UBE2D4Q9Y2X8 147 aa12.91□□□□□ -0.34
RCCD1-204ENST00000555737 GAGE12JA6NER3 117 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 GAGE7O76087 117 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 GAGE12FP0CL80 117 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 GAGE12GP0CL81 117 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 GAGE12IP0CL82 117 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 GAGE4Q13068 117 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 PIEZO1Q92508 2521 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 CHCHD7Q9BUK0 85 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 B4DSR2 109 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 TOMM7Q9P0U1 55 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 ZNF462Q96JM2 2506 aa12.9□□□□□ -0.34
RCCD1-204ENST00000555737 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
RCCD1-204ENST00000555737 TMEM101Q96IK0 257 aa12.89□□□□□ -0.35
RCCD1-204ENST00000555737 NBEAL2Q6ZNJ1 2754 aa12.89□□□□□ -0.35
RCCD1-204ENST00000555737 IGSF10Q6WRI0 2623 aa12.88□□□□□ -0.35
RCCD1-204ENST00000555737 LINC00694P0DN24 101 aa12.88□□□□□ -0.35
RCCD1-204ENST00000555737 PIK3CD-AS1Q5SR53 167 aa12.88□□□□□ -0.35
RCCD1-204ENST00000555737 PRIMA1Q86XR5 153 aa12.88□□□□□ -0.35
RCCD1-204ENST00000555737 Q8N2B8 174 aa12.88□□□□□ -0.35
RCCD1-204ENST00000555737 CIRBPQ14011 172 aaKnown RBP12.87□□□□□ -0.35
RCCD1-204ENST00000555737 ACANP16112 2415 aa12.86□□□□□ -0.35
RCCD1-204ENST00000555737 ZNF415Q09FC8 603 aa12.86□□□□□ -0.35
RCCD1-204ENST00000555737 Q9HAA7 133 aa12.86□□□□□ -0.35
RCCD1-204ENST00000555737 YAE1D1Q9NRH1 226 aa12.85□□□□□ -0.35
RCCD1-204ENST00000555737 TINCRA0A1B0GVN0 87 aa12.85□□□□□ -0.35
RCCD1-204ENST00000555737 C11orf68Q9H3H3 251 aaKnown RBP12.84□□□□□ -0.35
RCCD1-204ENST00000555737 LST1O00453 97 aa12.83□□□□□ -0.35
RCCD1-204ENST00000555737 CITED2Q99967 270 aaPredicted RBP12.83□□□□□ -0.35
RCCD1-204ENST00000555737 PYGO1Q9Y3Y4 419 aa12.83□□□□□ -0.35
RCCD1-204ENST00000555737 LINC00308Q8TCZ7 52 aa12.83□□□□□ -0.36
RCCD1-204ENST00000555737 SPANXDQ9BXN6 97 aa12.82□□□□□ -0.36
RCCD1-204ENST00000555737 SPANXCQ9NY87 97 aa12.82□□□□□ -0.36
RCCD1-204ENST00000555737 SPANXA1Q9NS26 97 aa12.81□□□□□ -0.36
RCCD1-204ENST00000555737 FAM236AA0A1B0GUQ0 79 aa12.81□□□□□ -0.36
RCCD1-204ENST00000555737 FAM236BA0A1B0GV22 79 aa12.81□□□□□ -0.36
RCCD1-204ENST00000555737 SOSTDC1Q6X4U4 206 aa12.81□□□□□ -0.36
RCCD1-204ENST00000555737 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
RCCD1-204ENST00000555737 PLA2G2AP14555 144 aa12.79□□□□□ -0.36
RCCD1-204ENST00000555737 Q6ZTI0 123 aa12.79□□□□□ -0.36
RCCD1-204ENST00000555737 MAP6D1Q9H9H5 199 aa12.79□□□□□ -0.36
RCCD1-204ENST00000555737 H3BT86 120 aa12.79□□□□□ -0.36
RCCD1-204ENST00000555737 GAGE2AQ6NT46 116 aa12.79□□□□□ -0.36
RCCD1-204ENST00000555737 M0QXV9 152 aa12.78□□□□□ -0.36
RCCD1-204ENST00000555737 DAZ2Q13117 558 aaKnown RBP12.78□□□□□ -0.36
RCCD1-204ENST00000555737 DAZ4Q86SG3 579 aaKnown RBP12.78□□□□□ -0.36
RCCD1-204ENST00000555737 DAZ3Q9NR90 486 aaKnown RBP12.78□□□□□ -0.36
RCCD1-204ENST00000555737 VPREB3Q9UKI3 123 aa12.77□□□□□ -0.36
RCCD1-204ENST00000555737 BAALC-AS2P0C853 105 aa12.77□□□□□ -0.37
RCCD1-204ENST00000555737 PPDPFQ9H3Y8 114 aa12.77□□□□□ -0.37
RCCD1-204ENST00000555737 SETXQ7Z333 2677 aaKnown RBP12.77□□□□□ -0.37
RCCD1-204ENST00000555737 LOC100131303A0A0U1RQF7 123 aa12.77□□□□□ -0.37
RCCD1-204ENST00000555737 GCN1Q92616 2671 aaKnown RBP12.76□□□□□ -0.37
RCCD1-204ENST00000555737 INSP01308 110 aa12.76□□□□□ -0.37
RCCD1-204ENST00000555737 AKAP9Q99996 3911 aa12.76□□□□□ -0.37
RCCD1-204ENST00000555737 PFN2P35080 140 aa12.76□□□□□ -0.37
RCCD1-204ENST00000555737 ZNF702PQ9H963 129 aa12.76□□□□□ -0.37
RCCD1-204ENST00000555737 NDUFA1O15239 70 aa12.75□□□□□ -0.37
RCCD1-204ENST00000555737 STHQ8IWL8 128 aa12.75□□□□□ -0.37
RCCD1-204ENST00000555737 LINC01356Q8N9X3 169 aa12.75□□□□□ -0.37
RCCD1-204ENST00000555737 UBE2L6O14933 153 aa12.75□□□□□ -0.37
RCCD1-204ENST00000555737 FAM218AQ96MZ4 157 aa12.75□□□□□ -0.37
RCCD1-204ENST00000555737 NOP10Q9NPE3 64 aaKnown RBP12.75□□□□□ -0.37
RCCD1-204ENST00000555737 TMEM89A2RUT3 159 aa12.75□□□□□ -0.37
RCCD1-204ENST00000555737 ATP5G1P05496 136 aa12.74□□□□□ -0.37
RCCD1-204ENST00000555737 WFDC10AQ9H1F0 79 aa12.74□□□□□ -0.37
RCCD1-204ENST00000555737 LINC00158P58513 81 aa12.73□□□□□ -0.37
RCCD1-204ENST00000555737 C11orf72Q8NBR9 251 aa12.73□□□□□ -0.37
RCCD1-204ENST00000555737 OR13C6PQ8NH95 151 aa12.73□□□□□ -0.37
RCCD1-204ENST00000555737 SMIM1B2RUZ4 78 aa12.73□□□□□ -0.37
RCCD1-204ENST00000555737 TRGV2A0A075B6R0 118 aa12.73□□□□□ -0.37
RCCD1-204ENST00000555737 RPL35AP18077 110 aaKnown RBP12.73□□□□□ -0.37
RCCD1-204ENST00000555737 HERVK_113P63121 156 aa12.73□□□□□ -0.37
RCCD1-204ENST00000555737 RPL36AP83881 106 aaKnown RBP12.73□□□□□ -0.37
RCCD1-204ENST00000555737 SMCR5Q8TEV8 140 aa12.73□□□□□ -0.37
RCCD1-204ENST00000555737 RPL36ALQ969Q0 106 aaKnown RBP12.73□□□□□ -0.37
RCCD1-204ENST00000555737 NTM-AS1Q6ZSK4 140 aa12.72□□□□□ -0.37
RCCD1-204ENST00000555737 COX7A2LO14548 114 aa12.71□□□□□ -0.37
RCCD1-204ENST00000555737 PRB1P04280 392 aa12.71□□□□□ -0.37
RCCD1-204ENST00000555737 MIR7-3HGQ8N6C7 128 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms