RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 M0QY20 66 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 IGHV3-53P01767 116 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 CEMP1Q6PRD7 247 aaPredicted RBP6.98□□□□□ -1.29
PSEN1-213ENST00000555386 JPT2Q9H910 190 aa6.98□□□□□ -1.29
PSEN1-213ENST00000555386 TRAV10A0A0B4J240 114 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 TEX48A0A1B0GUV7 120 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 NUPR2A6NF83 97 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 PRSS29PA6NIE9 313 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 E9PLD3 99 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 F5H768 121 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 ZNF56Q15929 161 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 ZNF876PQ49A33 203 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 OR4C5Q8NGB2 326 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
PSEN1-213ENST00000555386 SACSQ9NZJ4 4579 aa6.96□□□□□ -1.29
PSEN1-213ENST00000555386 KMT2CQ8NEZ4 4911 aaKnown RBP6.96□□□□□ -1.29
PSEN1-213ENST00000555386 DNAH1Q9P2D7 4330 aa6.96□□□□□ -1.3
PSEN1-213ENST00000555386 K7EP13 123 aa6.96□□□□□ -1.3
PSEN1-213ENST00000555386 TCTAP57738 103 aa6.96□□□□□ -1.3
PSEN1-213ENST00000555386 PMVKQ15126 192 aa6.96□□□□□ -1.3
PSEN1-213ENST00000555386 FAM74A4Q5TZK3 123 aa6.96□□□□□ -1.3
PSEN1-213ENST00000555386 KLK5Q9Y337 293 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-213ENST00000555386 ALMS1Q8TCU4 4167 aa6.95□□□□□ -1.3
PSEN1-213ENST00000555386 A8MWV9 139 aa6.95□□□□□ -1.3
PSEN1-213ENST00000555386 I3L3M4 83 aa6.95□□□□□ -1.3
PSEN1-213ENST00000555386 SMIM13P0DJ93 91 aa6.95□□□□□ -1.3
PSEN1-213ENST00000555386 DAZ2Q13117 558 aaKnown RBP6.95□□□□□ -1.3
PSEN1-213ENST00000555386 AMMECR1LQ6DCA0 310 aa6.95□□□□□ -1.3
PSEN1-213ENST00000555386 GTF2H5Q6ZYL4 71 aa6.95□□□□□ -1.3
PSEN1-213ENST00000555386 CEND1Q8N111 149 aa6.95□□□□□ -1.3
PSEN1-213ENST00000555386 TRAV8-6A0A0B4J262 113 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 MYMXA0A1B0GTQ4 84 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 M0R2P5 195 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 TSHBP01222 138 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 ATP5G1P05496 136 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 HERVK_113P61574 105 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 LCE2CQ5TA81 110 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 NEGR1Q7Z3B1 354 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 SPXQ9BT56 116 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
PSEN1-213ENST00000555386 HYDINQ4G0P3 5121 aa6.93□□□□□ -1.3
PSEN1-213ENST00000555386 A0A0J9YY99 117 aa6.93□□□□□ -1.3
PSEN1-213ENST00000555386 GCSHP23434 173 aa6.93□□□□□ -1.3
PSEN1-213ENST00000555386 MAPKAPK5-AS1Q8N8E1 139 aa6.93□□□□□ -1.3
PSEN1-213ENST00000555386 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
PSEN1-213ENST00000555386 IGLV4-69A0A075B6H9 119 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 IGHV3-73A0A0B4J1V6 119 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 GAGE10A6NGK3 116 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 RHODO00212 210 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 CRYBA4P53673 196 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 FXYD2P54710 66 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 UFSP1Q6NVU6 142 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 C20orf203Q8NBC4 194 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 PRADC1Q9BSG0 188 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 VPS13DQ5THJ4 4388 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 A0A1W2PPM0 123 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 H3BUT2 72 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 K7EP34 96 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 RPL39P62891 51 aaKnown RBP6.92□□□□□ -1.3
PSEN1-213ENST00000555386 NFE4Q86UQ8 179 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 LINC00612Q8N6U2 182 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 OR5A1Q8NGJ0 315 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 DNAJC30Q96LL9 226 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 PYGO1Q9Y3Y4 419 aa6.92□□□□□ -1.3
PSEN1-213ENST00000555386 TRBV7-3A0A075B6L6 115 aa6.91□□□□□ -1.3
PSEN1-213ENST00000555386 TRAV26-1A0A087WT03 109 aa6.91□□□□□ -1.3
PSEN1-213ENST00000555386 TRGV4A0A0C4DH28 118 aa6.91□□□□□ -1.3
PSEN1-213ENST00000555386 FABP2P12104 132 aa6.91□□□□□ -1.3
PSEN1-213ENST00000555386 ZNF479Q96JC4 524 aa6.91□□□□□ -1.3
PSEN1-213ENST00000555386 HIST1H4GQ99525 98 aa6.91□□□□□ -1.3
PSEN1-213ENST00000555386 A0A1B0GWB2 263 aa6.9□□□□□ -1.31
PSEN1-213ENST00000555386 LY6G6CO95867 125 aa6.9□□□□□ -1.31
PSEN1-213ENST00000555386 P0DMU3 169 aa6.9□□□□□ -1.31
PSEN1-213ENST00000555386 FAM231AP0DMU4 169 aa6.9□□□□□ -1.31
PSEN1-213ENST00000555386 FAM231CP0DMU5 169 aa6.9□□□□□ -1.31
PSEN1-213ENST00000555386 APLNQ9ULZ1 77 aa6.9□□□□□ -1.31
PSEN1-213ENST00000555386 TNFRSF18Q9Y5U5 241 aa6.9□□□□□ -1.31
PSEN1-213ENST00000555386 RYR2Q92736 4967 aa6.9□□□□□ -1.31
PSEN1-213ENST00000555386 ZNF815PA8K554 130 aa6.89□□□□□ -1.31
PSEN1-213ENST00000555386 CFAP126Q5VTH2 177 aa6.89□□□□□ -1.31
PSEN1-213ENST00000555386 RAB37Q96AX2 223 aa6.89□□□□□ -1.31
PSEN1-213ENST00000555386 NHP2Q9NX24 153 aaKnown RBP6.89□□□□□ -1.31
PSEN1-213ENST00000555386 KMT2AQ03164 3969 aa6.89□□□□□ -1.31
PSEN1-213ENST00000555386 RYR3Q15413 4870 aa6.88□□□□□ -1.31
PSEN1-213ENST00000555386 TRAV4A0A0B4J268 109 aa6.88□□□□□ -1.31
PSEN1-213ENST00000555386 RS1O15537 224 aa6.88□□□□□ -1.31
PSEN1-213ENST00000555386 PAX4O43316 350 aa6.88□□□□□ -1.31
PSEN1-213ENST00000555386 CDIP1Q9H305 208 aa6.88□□□□□ -1.31
PSEN1-213ENST00000555386 SPANXB1Q9NS25 103 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-213ENST00000555386 CBY1Q9Y3M2 126 aa6.88□□□□□ -1.31
PSEN1-213ENST00000555386 SPCS1Q9Y6A9 102 aa6.88□□□□□ -1.31
PSEN1-213ENST00000555386 IGLV4-3A0A075B6K6 122 aa6.87□□□□□ -1.31
PSEN1-213ENST00000555386 A0A096LPF7 62 aa6.87□□□□□ -1.31
PSEN1-213ENST00000555386 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
PSEN1-213ENST00000555386 FHL2Q14192 279 aa6.87□□□□□ -1.31
PSEN1-213ENST00000555386 TMEM170BQ5T4T1 132 aa6.87□□□□□ -1.31
PSEN1-213ENST00000555386 SCGB1D4Q6XE38 83 aa6.87□□□□□ -1.31
PSEN1-213ENST00000555386 ZNRF2Q8NHG8 242 aa6.87□□□□□ -1.31
PSEN1-213ENST00000555386 AMELXQ99217 191 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms