RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PRELID3AQ96N28 172 aa8.1□□□□□ -1.11
SYNE2-214ENST00000554928 IMMP2LQ96T52 175 aa8.1□□□□□ -1.11
SYNE2-214ENST00000554928 C20orf78Q9BR46 151 aa8.1□□□□□ -1.11
SYNE2-214ENST00000554928 SMIM2Q9BVW6 85 aa8.1□□□□□ -1.11
SYNE2-214ENST00000554928 KRTAP4-8Q9BYQ9 185 aa8.1□□□□□ -1.11
SYNE2-214ENST00000554928 COX11Q9Y6N1 276 aa8.1□□□□□ -1.11
SYNE2-214ENST00000554928 TCAPO15273 167 aa8.09□□□□□ -1.11
SYNE2-214ENST00000554928 PPP1R17O96001 155 aa8.09□□□□□ -1.11
SYNE2-214ENST00000554928 FCER1GP30273 86 aa8.09□□□□□ -1.11
SYNE2-214ENST00000554928 RPL32P62910 135 aaKnown RBP8.09□□□□□ -1.11
SYNE2-214ENST00000554928 CDPF1Q6NVV7 123 aa8.09□□□□□ -1.11
SYNE2-214ENST00000554928 ORMDL3Q8N138 153 aa8.09□□□□□ -1.11
SYNE2-214ENST00000554928 RPS10P5Q9NQ39 176 aa8.09□□□□□ -1.11
SYNE2-214ENST00000554928 USP17L23D6RBM5 183 aa8.08□□□□□ -1.12
SYNE2-214ENST00000554928 H7C423 109 aa8.08□□□□□ -1.12
SYNE2-214ENST00000554928 APOC3P02656 99 aa8.08□□□□□ -1.12
SYNE2-214ENST00000554928 RPL39P62891 51 aaKnown RBP8.08□□□□□ -1.12
SYNE2-214ENST00000554928 HAMPP81172 84 aa8.08□□□□□ -1.12
SYNE2-214ENST00000554928 KIAA1644Q3SXP7 199 aa8.08□□□□□ -1.12
SYNE2-214ENST00000554928 RNASE13Q5GAN3 156 aaKnown RBP8.08□□□□□ -1.12
SYNE2-214ENST00000554928 FAM104AQ969W3 186 aa8.08□□□□□ -1.12
SYNE2-214ENST00000554928 LOC389332A0A1B0GUA5 103 aa8.07□□□□□ -1.12
SYNE2-214ENST00000554928 PHOX2AO14813 284 aa8.07□□□□□ -1.12
SYNE2-214ENST00000554928 PPBPP02775 128 aa8.07□□□□□ -1.12
SYNE2-214ENST00000554928 GCSHP23434 173 aa8.07□□□□□ -1.12
SYNE2-214ENST00000554928 MRPL52Q86TS9 123 aaKnown RBP8.07□□□□□ -1.12
SYNE2-214ENST00000554928 KIR2DL4Q99706 377 aa8.07□□□□□ -1.12
SYNE2-214ENST00000554928 CDC42SE2Q9NRR3 84 aa8.07□□□□□ -1.12
SYNE2-214ENST00000554928 FAM30AQ9NZY2 134 aa8.07□□□□□ -1.12
SYNE2-214ENST00000554928 UBE2D4Q9Y2X8 147 aa8.07□□□□□ -1.12
SYNE2-214ENST00000554928 GAGE12HA6NDE8 117 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 CDK2AP2O75956 126 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 PRSS1P07477 247 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 ZNF25P17030 456 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-214ENST00000554928 XGP55808 180 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 RHEBQ15382 184 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 NDUFA5Q16718 116 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 Q6ZUT4 128 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 SLC7A5P1Q8MH63 180 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 OR5A1Q8NGJ0 315 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 CHCHD10Q8WYQ3 142 aaPredicted RBP8.06□□□□□ -1.12
SYNE2-214ENST00000554928 KRTAP4-5Q9BYR2 181 aa8.06□□□□□ -1.12
SYNE2-214ENST00000554928 TRAV9-1A0A075B6T8 112 aa8.05□□□□□ -1.12
SYNE2-214ENST00000554928 TGIF2-C20orf24A0A0A6YYL0 155 aa8.05□□□□□ -1.12
SYNE2-214ENST00000554928 TRAV8-4A0A0B4J246 113 aa8.05□□□□□ -1.12
SYNE2-214ENST00000554928 TMEM101Q96IK0 257 aa8.05□□□□□ -1.12
SYNE2-214ENST00000554928 OPRPNQ99935 248 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-214ENST00000554928 PCLOQ9Y6V0 5065 aa8.04□□□□□ -1.12
SYNE2-214ENST00000554928 LINC00959A0A1B0GUT2 108 aa8.04□□□□□ -1.12
SYNE2-214ENST00000554928 PRSS47A8MTI9 375 aa8.04□□□□□ -1.12
SYNE2-214ENST00000554928 S100PP25815 95 aa8.04□□□□□ -1.12
SYNE2-214ENST00000554928 ZNF664Q8N3J9 261 aa8.04□□□□□ -1.12
SYNE2-214ENST00000554928 XCL1P47992 114 aa8.03□□□□□ -1.12
SYNE2-214ENST00000554928 FOXI1Q12951 378 aa8.03□□□□□ -1.12
SYNE2-214ENST00000554928 C15orf56Q8N910 161 aa8.03□□□□□ -1.12
SYNE2-214ENST00000554928 MAP1LC3AQ9H492 121 aa8.03□□□□□ -1.12
SYNE2-214ENST00000554928 CCL25O15444 150 aa8.02□□□□□ -1.13
SYNE2-214ENST00000554928 SLPIP03973 132 aa8.02□□□□□ -1.13
SYNE2-214ENST00000554928 S100A1P23297 94 aa8.02□□□□□ -1.13
SYNE2-214ENST00000554928 Q8N8P6 123 aa8.02□□□□□ -1.13
SYNE2-214ENST00000554928 LAMTOR2Q9Y2Q5 125 aa8.02□□□□□ -1.13
SYNE2-214ENST00000554928 SNAPINO95295 136 aa8.01□□□□□ -1.13
SYNE2-214ENST00000554928 IFI27P40305 119 aaPredicted RBP8.01□□□□□ -1.13
SYNE2-214ENST00000554928 HIGD2BQ4VC39 106 aa8.01□□□□□ -1.13
SYNE2-214ENST00000554928 DGAT2L7PQ6IED9 249 aa8.01□□□□□ -1.13
SYNE2-214ENST00000554928 SVBPQ8N300 66 aa8.01□□□□□ -1.13
SYNE2-214ENST00000554928 TIMM21Q9BVV7 248 aa8.01□□□□□ -1.13
SYNE2-214ENST00000554928 GNB1LQ9BYB4 327 aa8.01□□□□□ -1.13
SYNE2-214ENST00000554928 CSDC2Q9Y534 153 aaKnown RBP8.01□□□□□ -1.13
SYNE2-214ENST00000554928 TRAV13-1A0A0B4J241 112 aa8□□□□□ -1.13
SYNE2-214ENST00000554928 RAB5AP20339 215 aa8□□□□□ -1.13
SYNE2-214ENST00000554928 C14orf177Q52M58 125 aa8□□□□□ -1.13
SYNE2-214ENST00000554928 ZC2HC1BQ5TFG8 222 aa8□□□□□ -1.13
SYNE2-214ENST00000554928 YPEL4Q96NS1 127 aa8□□□□□ -1.13
SYNE2-214ENST00000554928 ALKBH7Q9BT30 221 aaPredicted RBP8□□□□□ -1.13
SYNE2-214ENST00000554928 MRPL18Q9H0U6 180 aaKnown RBP8□□□□□ -1.13
SYNE2-214ENST00000554928 hDV102S1A0JD36 115 aa7.99□□□□□ -1.13
SYNE2-214ENST00000554928 FABP9Q0Z7S8 132 aa7.99□□□□□ -1.13
SYNE2-214ENST00000554928 Q6ZSA8 131 aa7.99□□□□□ -1.13
SYNE2-214ENST00000554928 TMEM18Q96B42 140 aa7.99□□□□□ -1.13
SYNE2-214ENST00000554928 LINC00526Q96FQ7 95 aa7.99□□□□□ -1.13
SYNE2-214ENST00000554928 IGLV4-3A0A075B6K6 122 aa7.98□□□□□ -1.13
SYNE2-214ENST00000554928 SS18Q15532 418 aa7.98□□□□□ -1.13
SYNE2-214ENST00000554928 CBLN2Q8IUK8 224 aa7.98□□□□□ -1.13
SYNE2-214ENST00000554928 SPANXA1Q9NS26 97 aa7.98□□□□□ -1.13
SYNE2-214ENST00000554928 PANO1I0J062 215 aa7.97□□□□□ -1.13
SYNE2-214ENST00000554928 SMR3BP02814 79 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-214ENST00000554928 MRPS36P82909 103 aaKnown RBP7.97□□□□□ -1.13
SYNE2-214ENST00000554928 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
SYNE2-214ENST00000554928 C2orf66Q6UXQ4 117 aa7.97□□□□□ -1.13
SYNE2-214ENST00000554928 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
SYNE2-214ENST00000554928 Q8N1X5 172 aa7.96□□□□□ -1.14
SYNE2-214ENST00000554928 C9orf163Q8N9P6 203 aa7.96□□□□□ -1.14
SYNE2-214ENST00000554928 GVQW2A0A096LPI5 108 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-214ENST00000554928 C1orf196B1AJZ1 125 aa7.95□□□□□ -1.14
SYNE2-214ENST00000554928 MT-ND6P03923 174 aa7.95□□□□□ -1.14
SYNE2-214ENST00000554928 CNBPP62633 177 aaKnown RBP7.95□□□□□ -1.14
SYNE2-214ENST00000554928 SMAGPQ0VAQ4 97 aa7.95□□□□□ -1.14
SYNE2-214ENST00000554928 COX19Q49B96 90 aa7.95□□□□□ -1.14
SYNE2-214ENST00000554928 ORMDL2Q53FV1 153 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms