RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 UBE2L6O14933 153 aa5.71□□□□□ -1.5
ACTN1-213ENST00000554508 NPYP01303 97 aa5.71□□□□□ -1.5
ACTN1-213ENST00000554508 MT-ND6P03923 174 aa5.71□□□□□ -1.5
ACTN1-213ENST00000554508 INAFM2P0DMQ5 153 aa5.71□□□□□ -1.5
ACTN1-213ENST00000554508 AMTP48728 403 aa5.71□□□□□ -1.5
ACTN1-213ENST00000554508 KIAA1644Q3SXP7 199 aa5.71□□□□□ -1.5
ACTN1-213ENST00000554508 LINC00269Q8N2A0 174 aa5.71□□□□□ -1.5
ACTN1-213ENST00000554508 C20orf78Q9BR46 151 aa5.71□□□□□ -1.5
ACTN1-213ENST00000554508 MRPL18Q9H0U6 180 aaKnown RBP5.71□□□□□ -1.5
ACTN1-213ENST00000554508 TRAV8-4A0A0B4J246 113 aa5.7□□□□□ -1.5
ACTN1-213ENST00000554508 FCER1GP30273 86 aa5.7□□□□□ -1.5
ACTN1-213ENST00000554508 POLR2KP53803 58 aaKnown RBP5.7□□□□□ -1.5
ACTN1-213ENST00000554508 REG3AQ06141 175 aa5.7□□□□□ -1.5
ACTN1-213ENST00000554508 FABP9Q0Z7S8 132 aa5.7□□□□□ -1.5
ACTN1-213ENST00000554508 DGAT2L7PQ6IED9 249 aa5.7□□□□□ -1.5
ACTN1-213ENST00000554508 KRTAP26-1Q6PEX3 210 aa5.7□□□□□ -1.5
ACTN1-213ENST00000554508 KIR2DL4Q99706 377 aa5.7□□□□□ -1.5
ACTN1-213ENST00000554508 TRAPPC1Q9Y5R8 145 aa5.7□□□□□ -1.5
ACTN1-213ENST00000554508 TRBV27A0A0K0K1C4 114 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 LOC389332A0A1B0GUA5 103 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 USP17L23D6RBM5 183 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 H7C423 109 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 PHOX2AO14813 284 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 TSHBP01222 138 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 HAMPP81172 84 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 CLPSL2Q6UWE3 100 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 C20orf203Q8NBC4 194 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 YPEL4Q96NS1 127 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 SMIM2Q9BVW6 85 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 MAP1LC3AQ9H492 121 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 LAMTOR2Q9Y2Q5 125 aa5.69□□□□□ -1.5
ACTN1-213ENST00000554508 IGLV4-60A0A075B6I1 120 aa5.68□□□□□ -1.5
ACTN1-213ENST00000554508 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.68□□□□□ -1.5
ACTN1-213ENST00000554508 IGKV2-29A2NJV5 120 aaPredicted RBP5.68□□□□□ -1.5
ACTN1-213ENST00000554508 LINC01620Q4KN68 170 aa5.68□□□□□ -1.5
ACTN1-213ENST00000554508 TCAPO15273 167 aa5.67□□□□□ -1.5
ACTN1-213ENST00000554508 PLA2G1BP04054 148 aaKnown RBP5.67□□□□□ -1.5
ACTN1-213ENST00000554508 PRSS1P07477 247 aa5.67□□□□□ -1.5
ACTN1-213ENST00000554508 RAB5AP20339 215 aa5.67□□□□□ -1.5
ACTN1-213ENST00000554508 RPL32P62910 135 aaKnown RBP5.67□□□□□ -1.5
ACTN1-213ENST00000554508 AMMECR1LQ6DCA0 310 aa5.67□□□□□ -1.5
ACTN1-213ENST00000554508 ALKBH7Q9BT30 221 aaPredicted RBP5.67□□□□□ -1.5
ACTN1-213ENST00000554508 CHAC1Q9BUX1 264 aa5.67□□□□□ -1.5
ACTN1-213ENST00000554508 FLG2Q5D862 2391 aaPredicted RBP5.66□□□□□ -1.5
ACTN1-213ENST00000554508 IGLV10-54A0A075B6I4 117 aa5.66□□□□□ -1.5
ACTN1-213ENST00000554508 PRSS47A8MTI9 375 aa5.66□□□□□ -1.5
ACTN1-213ENST00000554508 C1orf196B1AJZ1 125 aa5.66□□□□□ -1.5
ACTN1-213ENST00000554508 RNASEKQ6P5S7 137 aaKnown RBP5.66□□□□□ -1.5
ACTN1-213ENST00000554508 SCXQ7RTU7 201 aa5.66□□□□□ -1.5
ACTN1-213ENST00000554508 Q8N8P6 123 aa5.66□□□□□ -1.5
ACTN1-213ENST00000554508 C9orf163Q8N9P6 203 aa5.66□□□□□ -1.5
ACTN1-213ENST00000554508 PRSS3P2Q8NHM4 247 aa5.66□□□□□ -1.5
ACTN1-213ENST00000554508 SRRM2Q9UQ35 2752 aaKnown RBP5.65□□□□□ -1.5
ACTN1-213ENST00000554508 COLCA2A8K830 154 aa5.65□□□□□ -1.5
ACTN1-213ENST00000554508 FGF6P10767 208 aa5.65□□□□□ -1.5
ACTN1-213ENST00000554508 ESDP10768 282 aa5.65□□□□□ -1.5
ACTN1-213ENST00000554508 ZNF25P17030 456 aaPredicted RBP5.65□□□□□ -1.5
ACTN1-213ENST00000554508 IFI27P40305 119 aaPredicted RBP5.65□□□□□ -1.5
ACTN1-213ENST00000554508 RAB5BP61020 215 aa5.65□□□□□ -1.5
ACTN1-213ENST00000554508 LINC00528Q8N1L1 170 aa5.65□□□□□ -1.5
ACTN1-213ENST00000554508 TMEM18Q96B42 140 aa5.65□□□□□ -1.5
ACTN1-213ENST00000554508 TMEM101Q96IK0 257 aa5.65□□□□□ -1.5
ACTN1-213ENST00000554508 NXT2Q9NPJ8 142 aaKnown RBP5.65□□□□□ -1.5
ACTN1-213ENST00000554508 TMA7Q9Y2S6 64 aaKnown RBP5.65□□□□□ -1.5
ACTN1-213ENST00000554508 hDV102S1A0JD36 115 aa5.64□□□□□ -1.51
ACTN1-213ENST00000554508 CNBPP62633 177 aaKnown RBP5.64□□□□□ -1.51
ACTN1-213ENST00000554508 CFAP161Q6P656 301 aa5.64□□□□□ -1.51
ACTN1-213ENST00000554508 CIRBP-AS1Q8TBR5 109 aa5.64□□□□□ -1.51
ACTN1-213ENST00000554508 AP5S1Q9NUS5 200 aa5.64□□□□□ -1.51
ACTN1-213ENST00000554508 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.63□□□□□ -1.51
ACTN1-213ENST00000554508 IGKV3OR2-268A0A0C4DH90 116 aa5.63□□□□□ -1.51
ACTN1-213ENST00000554508 GAGE12HA6NDE8 117 aa5.63□□□□□ -1.51
ACTN1-213ENST00000554508 K7EMI3 77 aa5.63□□□□□ -1.51
ACTN1-213ENST00000554508 TRGC2P03986 189 aa5.63□□□□□ -1.51
ACTN1-213ENST00000554508 S100A6P06703 90 aa5.63□□□□□ -1.51
ACTN1-213ENST00000554508 RPL39P62891 51 aaKnown RBP5.63□□□□□ -1.51
ACTN1-213ENST00000554508 SMAGPQ0VAQ4 97 aa5.63□□□□□ -1.51
ACTN1-213ENST00000554508 ORMDL2Q53FV1 153 aa5.63□□□□□ -1.51
ACTN1-213ENST00000554508 FA2HQ7L5A8 372 aa5.63□□□□□ -1.51
ACTN1-213ENST00000554508 OR5A1Q8NGJ0 315 aa5.63□□□□□ -1.51
ACTN1-213ENST00000554508 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
ACTN1-213ENST00000554508 MYCBP2O75592 4640 aa5.62□□□□□ -1.51
ACTN1-213ENST00000554508 SDIM1Q6ZPB5 146 aa5.62□□□□□ -1.51
ACTN1-213ENST00000554508 MRPL52Q86TS9 123 aaKnown RBP5.62□□□□□ -1.51
ACTN1-213ENST00000554508 C18orf32Q8TCD1 76 aa5.62□□□□□ -1.51
ACTN1-213ENST00000554508 CHCHD10Q8WYQ3 142 aaPredicted RBP5.62□□□□□ -1.51
ACTN1-213ENST00000554508 UBE2D4Q9Y2X8 147 aa5.62□□□□□ -1.51
ACTN1-213ENST00000554508 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
ACTN1-213ENST00000554508 IGHV3-64A0A075B6Q5 118 aa5.61□□□□□ -1.51
ACTN1-213ENST00000554508 G0S2P27469 103 aa5.61□□□□□ -1.51
ACTN1-213ENST00000554508 C2orf66Q6UXQ4 117 aa5.61□□□□□ -1.51
ACTN1-213ENST00000554508 ZNF664Q8N3J9 261 aa5.61□□□□□ -1.51
ACTN1-213ENST00000554508 CDC42SE2Q9NRR3 84 aa5.61□□□□□ -1.51
ACTN1-213ENST00000554508 SPANXA1Q9NS26 97 aa5.61□□□□□ -1.51
ACTN1-213ENST00000554508 CYSLTR1Q9Y271 337 aa5.61□□□□□ -1.51
ACTN1-213ENST00000554508 SLPIP03973 132 aa5.6□□□□□ -1.51
ACTN1-213ENST00000554508 LINC00614P0C842 121 aa5.6□□□□□ -1.51
ACTN1-213ENST00000554508 CIRBPQ14011 172 aaKnown RBP5.6□□□□□ -1.51
ACTN1-213ENST00000554508 RNASE13Q5GAN3 156 aaKnown RBP5.6□□□□□ -1.51
ACTN1-213ENST00000554508 C15orf56Q8N910 161 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms