RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
LINC00640-201ENST00000554409 A0A1B0GXF2 115 aa4.88□□□□□ -1.63
LINC00640-201ENST00000554409 PPP1R2P9O14990 202 aa4.88□□□□□ -1.63
LINC00640-201ENST00000554409 SMR3BP02814 79 aaPredicted RBP4.88□□□□□ -1.63
LINC00640-201ENST00000554409 S100A8P05109 93 aa4.88□□□□□ -1.63
LINC00640-201ENST00000554409 RAB14P61106 215 aa4.88□□□□□ -1.63
LINC00640-201ENST00000554409 HAMPP81172 84 aa4.88□□□□□ -1.63
LINC00640-201ENST00000554409 LINC01620Q4KN68 170 aa4.88□□□□□ -1.63
LINC00640-201ENST00000554409 MRPL51Q4U2R6 128 aaKnown RBP4.88□□□□□ -1.63
LINC00640-201ENST00000554409 MRPL52Q86TS9 123 aaKnown RBP4.88□□□□□ -1.63
LINC00640-201ENST00000554409 NRACQ8N912 160 aa4.88□□□□□ -1.63
LINC00640-201ENST00000554409 TMEM242Q9NWH2 141 aa4.88□□□□□ -1.63
LINC00640-201ENST00000554409 TRBV24-1A0A075B6N3 115 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 C7orf77A4D0Y5 90 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 LINC00862A6NCI5 91 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 SMKR1H3BMG3 65 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 VCYO14598 125 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 SUMO2P61956 95 aaKnown RBP4.87□□□□□ -1.63
LINC00640-201ENST00000554409 CNBPP62633 177 aaKnown RBP4.87□□□□□ -1.63
LINC00640-201ENST00000554409 RPL32P62910 135 aaKnown RBP4.87□□□□□ -1.63
LINC00640-201ENST00000554409 HBBP68871 147 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 PNRC1Q12796 327 aaPredicted RBP4.87□□□□□ -1.63
LINC00640-201ENST00000554409 CLLU1Q5K131 121 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 RNASEKQ6P5S7 137 aaKnown RBP4.87□□□□□ -1.63
LINC00640-201ENST00000554409 SCXQ7RTU7 201 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 ATP5L2Q7Z4Y8 100 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 C9orf163Q8N9P6 203 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 OR5A1Q8NGJ0 315 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 TMEM101Q96IK0 257 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 CHAC1Q9BUX1 264 aa4.87□□□□□ -1.63
LINC00640-201ENST00000554409 GAGE12HA6NDE8 117 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 F8W036 122 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 TCAPO15273 167 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 INAFM2P0DMQ5 153 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 CAMPP49913 170 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 LCE4AQ5TA78 99 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 MRPL54Q6P161 138 aaKnown RBP4.86□□□□□ -1.63
LINC00640-201ENST00000554409 CHCHD10Q8WYQ3 142 aaPredicted RBP4.86□□□□□ -1.63
LINC00640-201ENST00000554409 BTF3L4Q96K17 158 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 KIR2DL4Q99706 377 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 C20orf78Q9BR46 151 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 CDC42SE2Q9NRR3 84 aa4.86□□□□□ -1.63
LINC00640-201ENST00000554409 CSDC2Q9Y534 153 aaKnown RBP4.86□□□□□ -1.63
LINC00640-201ENST00000554409 IGKV3OR2-268A0A0C4DH90 116 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 LINC00959A0A1B0GUT2 108 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 hDV102S1A0JD36 115 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 PHOX2AO14813 284 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 PPBPP02775 128 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 FCER1GP30273 86 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 CKS2P33552 79 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 SMAGPQ0VAQ4 97 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 CFAP161Q6P656 301 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 ZNF664Q8N3J9 261 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 C15orf56Q8N910 161 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 CIRBP-AS1Q8TBR5 109 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 TIMM21Q9BVV7 248 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 CDIP1Q9H305 208 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
LINC00640-201ENST00000554409 GVQW2A0A096LPI5 108 aaPredicted RBP4.84□□□□□ -1.63
LINC00640-201ENST00000554409 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.84□□□□□ -1.63
LINC00640-201ENST00000554409 D6R8Y8 96 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 TNFRSF6BO95407 300 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 MT-ND4LP03901 98 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 IFITM2Q01629 132 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 FOXI1Q12951 378 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 CIRBPQ14011 172 aaKnown RBP4.84□□□□□ -1.63
LINC00640-201ENST00000554409 UQCC3Q6UW78 93 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 SDIM1Q6ZPB5 146 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 TMEM18Q96B42 140 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 SMIM2Q9BVW6 85 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 UBE2D4Q9Y2X8 147 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 ABCA13Q86UQ4 5058 aa4.84□□□□□ -1.63
LINC00640-201ENST00000554409 CCL25O15444 150 aa4.83□□□□□ -1.64
LINC00640-201ENST00000554409 NPYP01303 97 aa4.83□□□□□ -1.64
LINC00640-201ENST00000554409 SLPIP03973 132 aa4.83□□□□□ -1.64
LINC00640-201ENST00000554409 SS18Q15532 418 aa4.83□□□□□ -1.64
LINC00640-201ENST00000554409 ORMDL3Q8N138 153 aa4.83□□□□□ -1.64
LINC00640-201ENST00000554409 IGHV3-64A0A075B6Q5 118 aa4.82□□□□□ -1.64
LINC00640-201ENST00000554409 PRSS47A8MTI9 375 aa4.82□□□□□ -1.64
LINC00640-201ENST00000554409 ADCYAP1P18509 176 aa4.82□□□□□ -1.64
LINC00640-201ENST00000554409 XCL1P47992 114 aa4.82□□□□□ -1.64
LINC00640-201ENST00000554409 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
LINC00640-201ENST00000554409 CD164L2Q6UWJ8 174 aa4.82□□□□□ -1.64
LINC00640-201ENST00000554409 SPANXA1Q9NS26 97 aa4.82□□□□□ -1.64
LINC00640-201ENST00000554409 LAMTOR2Q9Y2Q5 125 aa4.82□□□□□ -1.64
LINC00640-201ENST00000554409 VPS13BQ7Z7G8 4022 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 IGHV1-58A0A0C4DH39 117 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 TMEM218A2RU14 115 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 C1orf196B1AJZ1 125 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 PANO1I0J062 215 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 HIGD2BQ4VC39 106 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 TMEM136Q6ZRR5 245 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 Q6ZUT4 128 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 PRELID3AQ96N28 172 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 IMMP2LQ96T52 175 aa4.81□□□□□ -1.64
LINC00640-201ENST00000554409 FAT1Q14517 4588 aa4.8□□□□□ -1.64
LINC00640-201ENST00000554409 C9orf118A6NHY6 69 aa4.8□□□□□ -1.64
LINC00640-201ENST00000554409 RPL39P62891 51 aaKnown RBP4.8□□□□□ -1.64
LINC00640-201ENST00000554409 MRPS36P82909 103 aaKnown RBP4.8□□□□□ -1.64
LINC00640-201ENST00000554409 SPACA4Q8TDM5 124 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms