RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 MRPL52Q86TS9 123 aaKnown RBP8.31□□□□□ -1.08
NEDD1-206ENST00000554226 TSKUQ8WUA8 353 aa8.31□□□□□ -1.08
NEDD1-206ENST00000554226 TMEM101Q96IK0 257 aa8.31□□□□□ -1.08
NEDD1-206ENST00000554226 BTF3L4Q96K17 158 aa8.31□□□□□ -1.08
NEDD1-206ENST00000554226 C2orf48Q96LS8 159 aa8.31□□□□□ -1.08
NEDD1-206ENST00000554226 SDHAF1A6NFY7 115 aa8.3□□□□□ -1.08
NEDD1-206ENST00000554226 IFNA1P01562 189 aa8.3□□□□□ -1.08
NEDD1-206ENST00000554226 EIF5AP63241 154 aaKnown RBP8.3□□□□□ -1.08
NEDD1-206ENST00000554226 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
NEDD1-206ENST00000554226 EIF5AL1Q6IS14 154 aaKnown RBP8.3□□□□□ -1.08
NEDD1-206ENST00000554226 TEX261Q6UWH6 196 aa8.3□□□□□ -1.08
NEDD1-206ENST00000554226 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
NEDD1-206ENST00000554226 TRBV6-5A0A0K0K1A5 114 aa8.29□□□□□ -1.08
NEDD1-206ENST00000554226 G3V3Q6 166 aa8.29□□□□□ -1.08
NEDD1-206ENST00000554226 KCNRGQ8N5I3 272 aa8.29□□□□□ -1.08
NEDD1-206ENST00000554226 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
NEDD1-206ENST00000554226 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
NEDD1-206ENST00000554226 I3L3M4 83 aa8.28□□□□□ -1.08
NEDD1-206ENST00000554226 CCL20P78556 96 aa8.28□□□□□ -1.08
NEDD1-206ENST00000554226 CAMK2N2Q96S95 79 aa8.28□□□□□ -1.08
NEDD1-206ENST00000554226 BCL2L11O43521 198 aa8.27□□□□□ -1.09
NEDD1-206ENST00000554226 TWIST1Q15672 202 aa8.27□□□□□ -1.09
NEDD1-206ENST00000554226 KRTAP11-1Q8IUC1 163 aa8.27□□□□□ -1.09
NEDD1-206ENST00000554226 FAM213BQ8TBF2 198 aa8.27□□□□□ -1.09
NEDD1-206ENST00000554226 MRAP2Q96G30 205 aa8.27□□□□□ -1.09
NEDD1-206ENST00000554226 CARHSP1Q9Y2V2 147 aaKnown RBP8.27□□□□□ -1.09
NEDD1-206ENST00000554226 C1orf196B1AJZ1 125 aa8.26□□□□□ -1.09
NEDD1-206ENST00000554226 COX7A2LO14548 114 aa8.26□□□□□ -1.09
NEDD1-206ENST00000554226 TSHBP01222 138 aa8.26□□□□□ -1.09
NEDD1-206ENST00000554226 UBE2D1P51668 147 aa8.26□□□□□ -1.09
NEDD1-206ENST00000554226 RPL18AQ02543 176 aaKnown RBP8.26□□□□□ -1.09
NEDD1-206ENST00000554226 MANBALQ9NQG1 85 aa8.26□□□□□ -1.09
NEDD1-206ENST00000554226 BIN3Q9NQY0 253 aa8.26□□□□□ -1.09
NEDD1-206ENST00000554226 TRBV20OR9-2A0A075B6H5 130 aa8.25□□□□□ -1.09
NEDD1-206ENST00000554226 A0A087WZ39 114 aa8.25□□□□□ -1.09
NEDD1-206ENST00000554226 A0A1B0GV50 99 aa8.25□□□□□ -1.09
NEDD1-206ENST00000554226 ARPC5O15511 151 aa8.25□□□□□ -1.09
NEDD1-206ENST00000554226 H2AFB1P0C5Y9 115 aa8.25□□□□□ -1.09
NEDD1-206ENST00000554226 MALP21145 153 aa8.25□□□□□ -1.09
NEDD1-206ENST00000554226 GNG4P50150 75 aa8.25□□□□□ -1.09
NEDD1-206ENST00000554226 PMCHP20382 165 aa8.24□□□□□ -1.09
NEDD1-206ENST00000554226 MRPL35Q9NZE8 188 aaKnown RBP8.24□□□□□ -1.09
NEDD1-206ENST00000554226 CSDC2Q9Y534 153 aaKnown RBP8.24□□□□□ -1.09
NEDD1-206ENST00000554226 F8WDY8 70 aa8.23□□□□□ -1.09
NEDD1-206ENST00000554226 TLX1NBP0CAT3 122 aa8.23□□□□□ -1.09
NEDD1-206ENST00000554226 ZNF345Q14585 488 aa8.23□□□□□ -1.09
NEDD1-206ENST00000554226 NUDT10Q8NFP7 164 aa8.23□□□□□ -1.09
NEDD1-206ENST00000554226 NUDT11Q96G61 164 aa8.23□□□□□ -1.09
NEDD1-206ENST00000554226 TRBV27A0A0K0K1C4 114 aa8.22□□□□□ -1.09
NEDD1-206ENST00000554226 RAB19A4D1S5 217 aa8.22□□□□□ -1.09
NEDD1-206ENST00000554226 SMIM15Q7Z3B0 74 aa8.22□□□□□ -1.09
NEDD1-206ENST00000554226 OR10D4PQ8NGN7 298 aa8.22□□□□□ -1.09
NEDD1-206ENST00000554226 OPRPNQ99935 248 aaPredicted RBP8.22□□□□□ -1.09
NEDD1-206ENST00000554226 FAM168BA1KXE4 195 aa8.21□□□□□ -1.1
NEDD1-206ENST00000554226 C7orf77A4D0Y5 90 aa8.21□□□□□ -1.1
NEDD1-206ENST00000554226 POLR2KP53803 58 aaKnown RBP8.21□□□□□ -1.1
NEDD1-206ENST00000554226 IMMP2LQ96T52 175 aa8.21□□□□□ -1.1
NEDD1-206ENST00000554226 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.1
NEDD1-206ENST00000554226 TMEM242Q9NWH2 141 aa8.21□□□□□ -1.1
NEDD1-206ENST00000554226 GNG13Q9P2W3 67 aa8.21□□□□□ -1.1
NEDD1-206ENST00000554226 PDE6DO43924 150 aa8.2□□□□□ -1.1
NEDD1-206ENST00000554226 FOXA3P55318 350 aaPredicted RBP8.2□□□□□ -1.1
NEDD1-206ENST00000554226 SPAG11BQ08648 103 aa8.2□□□□□ -1.1
NEDD1-206ENST00000554226 KRTAP7-1Q8IUC3 87 aa8.2□□□□□ -1.1
NEDD1-206ENST00000554226 RNASE7Q9H1E1 156 aaKnown RBP8.2□□□□□ -1.1
NEDD1-206ENST00000554226 ST20Q9HBF5 79 aa8.2□□□□□ -1.1
NEDD1-206ENST00000554226 CRCT1Q9UGL9 99 aa8.2□□□□□ -1.1
NEDD1-206ENST00000554226 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
NEDD1-206ENST00000554226 UBE2D4Q9Y2X8 147 aa8.18□□□□□ -1.1
NEDD1-206ENST00000554226 FSIP2Q5CZC0 6907 aa8.17□□□□□ -1.1
NEDD1-206ENST00000554226 SMAGPQ0VAQ4 97 aa8.17□□□□□ -1.1
NEDD1-206ENST00000554226 TMEM241Q24JQ0 296 aa8.17□□□□□ -1.1
NEDD1-206ENST00000554226 FAM19A5Q7Z5A7 132 aaPredicted RBP8.17□□□□□ -1.1
NEDD1-206ENST00000554226 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
NEDD1-206ENST00000554226 SMDT1Q9H4I9 107 aa8.17□□□□□ -1.1
NEDD1-206ENST00000554226 NDUFA1O15239 70 aa8.16□□□□□ -1.1
NEDD1-206ENST00000554226 TIMM21Q9BVV7 248 aa8.16□□□□□ -1.1
NEDD1-206ENST00000554226 TRAV13-1A0A0B4J241 112 aa8.15□□□□□ -1.1
NEDD1-206ENST00000554226 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
NEDD1-206ENST00000554226 K7EN84 100 aa8.15□□□□□ -1.1
NEDD1-206ENST00000554226 M0QXV9 152 aa8.15□□□□□ -1.1
NEDD1-206ENST00000554226 ZNF861PO60384 105 aa8.15□□□□□ -1.1
NEDD1-206ENST00000554226 MED9Q9NWA0 146 aa8.15□□□□□ -1.1
NEDD1-206ENST00000554226 HMSDA8MTL9 139 aa8.14□□□□□ -1.11
NEDD1-206ENST00000554226 TSPAN13O95857 204 aa8.14□□□□□ -1.11
NEDD1-206ENST00000554226 C10orf25Q5T742 122 aa8.14□□□□□ -1.11
NEDD1-206ENST00000554226 C6orf48Q9UBA6 75 aa8.14□□□□□ -1.11
NEDD1-206ENST00000554226 VCYO14598 125 aa8.13□□□□□ -1.11
NEDD1-206ENST00000554226 UBE2BP63146 152 aa8.13□□□□□ -1.11
NEDD1-206ENST00000554226 TPRXLQ17RH7 258 aa8.13□□□□□ -1.11
NEDD1-206ENST00000554226 ORAOV1Q8WV07 137 aa8.13□□□□□ -1.11
NEDD1-206ENST00000554226 TMEM191AQ9H0A3 160 aa8.13□□□□□ -1.11
NEDD1-206ENST00000554226 A0A087X002 238 aa8.12□□□□□ -1.11
NEDD1-206ENST00000554226 TEX46H3BTG2 121 aa8.12□□□□□ -1.11
NEDD1-206ENST00000554226 RNASE13Q5GAN3 156 aaKnown RBP8.12□□□□□ -1.11
NEDD1-206ENST00000554226 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
NEDD1-206ENST00000554226 Q6ZUT4 128 aa8.12□□□□□ -1.11
NEDD1-206ENST00000554226 OCC1Q8TAD7 63 aa8.12□□□□□ -1.11
NEDD1-206ENST00000554226 KANTRA0A1W2PQU2 76 aa8.11□□□□□ -1.11
NEDD1-206ENST00000554226 A8MWL6 223 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms