RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 Q6ZSV7 163 aa6.65□□□□□ -1.35
AL049839.2-201ENST00000553947 ATOX1O00244 68 aa6.64□□□□□ -1.35
AL049839.2-201ENST00000553947 HOXD3P31249 432 aaPredicted RBP6.64□□□□□ -1.35
AL049839.2-201ENST00000553947 MRAPQ8TCY5 172 aa6.64□□□□□ -1.35
AL049839.2-201ENST00000553947 SMCR5Q8TEV8 140 aa6.64□□□□□ -1.35
AL049839.2-201ENST00000553947 DPH3P1Q9H4G8 78 aa6.64□□□□□ -1.35
AL049839.2-201ENST00000553947 PRRC2AP48634 2157 aaKnown RBP6.64□□□□□ -1.35
AL049839.2-201ENST00000553947 TRAV12-2A0A075B6T6 113 aa6.64□□□□□ -1.35
AL049839.2-201ENST00000553947 JPT2Q9H910 190 aa6.64□□□□□ -1.35
AL049839.2-201ENST00000553947 F5H697 171 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 K7EQG2 157 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 TSHBP01222 138 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 AKAP9Q99996 3911 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 LST1O00453 97 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 UBE2E2Q96LR5 201 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 AMELXQ99217 191 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 CREBBPQ92793 2442 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 A0A0J9YX75 114 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 LEPROTO15243 131 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 SLURP1P55000 103 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 TMEM258P61165 79 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 PEMTQ9UBM1 199 aa6.63□□□□□ -1.35
AL049839.2-201ENST00000553947 SORL1Q92673 2214 aa6.62□□□□□ -1.35
AL049839.2-201ENST00000553947 NACAE9PAV3 2078 aa6.62□□□□□ -1.35
AL049839.2-201ENST00000553947 I3L3M4 83 aa6.62□□□□□ -1.35
AL049839.2-201ENST00000553947 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
AL049839.2-201ENST00000553947 CYSTM1Q9H1C7 97 aa6.62□□□□□ -1.35
AL049839.2-201ENST00000553947 LINC00315P59091 139 aa6.62□□□□□ -1.35
AL049839.2-201ENST00000553947 LINC01600Q96MT4 127 aa6.62□□□□□ -1.35
AL049839.2-201ENST00000553947 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
AL049839.2-201ENST00000553947 KIF25-AS1Q9Y6Z4 181 aa6.62□□□□□ -1.35
AL049839.2-201ENST00000553947 TENM4Q6N022 2769 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 TLN2Q9Y4G6 2542 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 A0A0J9YXY3 114 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 DEFB121Q5J5C9 76 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 WFDC11Q8NEX6 87 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 TMEM141Q96I45 108 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 PKIGQ9Y2B9 76 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 IGIPA6NJ69 53 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 NXPH4O95158 308 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 PPP1R17O96001 155 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 SNRPD3P62318 126 aaKnown RBP6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 SPINK13Q1W4C9 94 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 SDIM1Q6ZPB5 146 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 C2orf48Q96LS8 159 aa6.61□□□□□ -1.35
AL049839.2-201ENST00000553947 ITPR3Q14573 2671 aa6.6□□□□□ -1.35
AL049839.2-201ENST00000553947 A0A087WWL8 130 aa6.6□□□□□ -1.35
AL049839.2-201ENST00000553947 ZNF876PQ49A33 203 aa6.6□□□□□ -1.35
AL049839.2-201ENST00000553947 Q8N2B8 174 aa6.6□□□□□ -1.35
AL049839.2-201ENST00000553947 IGKV3D-7A0A0C4DH55 119 aa6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 OXTP01178 125 aa6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 CXCL5P42830 114 aa6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 DAZ2Q13117 558 aaKnown RBP6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 DAZ4Q86SG3 579 aaKnown RBP6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 TIMM21Q9BVV7 248 aa6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 DAZ3Q9NR90 486 aaKnown RBP6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 PYGO1Q9Y3Y4 419 aa6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 SONP18583 2426 aaKnown RBP6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 IGHV3-16A0A0C4DH30 117 aa6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 A0A0J9YXV3 536 aa6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 VCYO14598 125 aa6.59□□□□□ -1.35
AL049839.2-201ENST00000553947 KNCNA6PVL3 124 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 RBMY1A1P0DJD3 496 aaKnown RBP6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 RBMY1CP0DJD4 496 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 RBMY1FQ15415 496 aaKnown RBP6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 SUMO4Q6EEV6 95 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 TIMM17AQ99595 171 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 MYO9AB2RTY4 2548 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 RPL18AQ02543 176 aaKnown RBP6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 Q5XG85 94 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 C5orf38Q86SI9 138 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 C9orf85Q96MD7 179 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 SDHAF1A6NFY7 115 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 KHDC1LQ5JSQ8 128 aa6.58□□□□□ -1.36
AL049839.2-201ENST00000553947 BAALC-AS2P0C853 105 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 ADAMTSL4-AS1Q5T5F5 129 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 FAM74A4Q5TZK3 123 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 SERP2Q8N6R1 65 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 DAND5Q8N907 189 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 IGHV1OR15-1A0A075B7D0 117 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 PRM2P04554 102 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 IGHV3-30-3P0DP02 117 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 RPL35AP18077 110 aaKnown RBP6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 DEFB131AP59861 70 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 TMEM61Q8N0U2 210 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
AL049839.2-201ENST00000553947 CCDC168Q8NDH2 2452 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 RBMY1BA6NDE4 496 aaKnown RBP6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 RBMY1EA6NEQ0 496 aaKnown RBP6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 RBMY1DP0C7P1 496 aaKnown RBP6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 PFN2P35080 140 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 TIRAPP58753 221 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 A0A0U1RRA0 63 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 TINCRA0A1B0GVN0 87 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 C11orf44Q8N8P7 122 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 PRO0628Q9UI54 55 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 NF1P21359 2839 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 PDZD2O15018 2839 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 A0A087WVE0 104 aa6.56□□□□□ -1.36
AL049839.2-201ENST00000553947 DNAL4O96015 105 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms