RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 C15orf56Q8N910 161 aa12.98□□□□□ -0.33
PRAF2-202ENST00000553851 OR5A1Q8NGJ0 315 aa12.98□□□□□ -0.33
PRAF2-202ENST00000553851 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.97□□□□□ -0.33
PRAF2-202ENST00000553851 VCYO14598 125 aa12.97□□□□□ -0.33
PRAF2-202ENST00000553851 PPP1R17O96001 155 aa12.97□□□□□ -0.33
PRAF2-202ENST00000553851 CAMPP49913 170 aa12.97□□□□□ -0.33
PRAF2-202ENST00000553851 FAM104BQ5XKR9 115 aa12.97□□□□□ -0.33
PRAF2-202ENST00000553851 NRACQ8N912 160 aa12.97□□□□□ -0.33
PRAF2-202ENST00000553851 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.97□□□□□ -0.33
PRAF2-202ENST00000553851 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
PRAF2-202ENST00000553851 PANO1I0J062 215 aa12.96□□□□□ -0.33
PRAF2-202ENST00000553851 ADCYAP1P18509 176 aa12.96□□□□□ -0.33
PRAF2-202ENST00000553851 MRPL51Q4U2R6 128 aaKnown RBP12.96□□□□□ -0.33
PRAF2-202ENST00000553851 C7orf77A4D0Y5 90 aa12.95□□□□□ -0.34
PRAF2-202ENST00000553851 PPP1R2P9O14990 202 aa12.95□□□□□ -0.34
PRAF2-202ENST00000553851 FCER1GP30273 86 aa12.95□□□□□ -0.34
PRAF2-202ENST00000553851 SUMO2P61956 95 aaKnown RBP12.95□□□□□ -0.34
PRAF2-202ENST00000553851 LINC00959A0A1B0GUT2 108 aa12.94□□□□□ -0.34
PRAF2-202ENST00000553851 A0A1B0GW15 77 aa12.94□□□□□ -0.34
PRAF2-202ENST00000553851 KRTAP10-4P60372 401 aaPredicted RBP12.94□□□□□ -0.34
PRAF2-202ENST00000553851 FOXI1Q12951 378 aa12.94□□□□□ -0.34
PRAF2-202ENST00000553851 HIGD2BQ4VC39 106 aa12.94□□□□□ -0.34
PRAF2-202ENST00000553851 C10orf91Q5T1B1 145 aa12.94□□□□□ -0.34
PRAF2-202ENST00000553851 MRPL52Q86TS9 123 aaKnown RBP12.94□□□□□ -0.34
PRAF2-202ENST00000553851 CDC42SE2Q9NRR3 84 aa12.94□□□□□ -0.34
PRAF2-202ENST00000553851 XCL1P47992 114 aa12.93□□□□□ -0.34
PRAF2-202ENST00000553851 CARHSP1Q9Y2V2 147 aaKnown RBP12.93□□□□□ -0.34
PRAF2-202ENST00000553851 CCL25O15444 150 aa12.92□□□□□ -0.34
PRAF2-202ENST00000553851 MT-ND4LP03901 98 aa12.92□□□□□ -0.34
PRAF2-202ENST00000553851 NDUFA5Q16718 116 aa12.92□□□□□ -0.34
PRAF2-202ENST00000553851 ZNF664Q8N3J9 261 aa12.92□□□□□ -0.34
PRAF2-202ENST00000553851 ANAPC16Q96DE5 110 aa12.92□□□□□ -0.34
PRAF2-202ENST00000553851 KIR2DL4Q99706 377 aa12.92□□□□□ -0.34
PRAF2-202ENST00000553851 CKS2P33552 79 aa12.91□□□□□ -0.34
PRAF2-202ENST00000553851 MRPL54Q6P161 138 aaKnown RBP12.91□□□□□ -0.34
PRAF2-202ENST00000553851 DPH3Q96FX2 82 aa12.91□□□□□ -0.34
PRAF2-202ENST00000553851 CIRBPQ14011 172 aaKnown RBP12.9□□□□□ -0.34
PRAF2-202ENST00000553851 SS18Q15532 418 aa12.9□□□□□ -0.34
PRAF2-202ENST00000553851 GVQW2A0A096LPI5 108 aaPredicted RBP12.89□□□□□ -0.35
PRAF2-202ENST00000553851 J3QL48 77 aa12.89□□□□□ -0.35
PRAF2-202ENST00000553851 S100A8P05109 93 aa12.89□□□□□ -0.35
PRAF2-202ENST00000553851 RPL37AP61513 92 aaKnown RBP12.89□□□□□ -0.35
PRAF2-202ENST00000553851 HBBP68871 147 aa12.89□□□□□ -0.35
PRAF2-202ENST00000553851 C20orf78Q9BR46 151 aa12.89□□□□□ -0.35
PRAF2-202ENST00000553851 TRBV24-1A0A075B6N3 115 aa12.88□□□□□ -0.35
PRAF2-202ENST00000553851 A0A1B0GXF2 115 aa12.88□□□□□ -0.35
PRAF2-202ENST00000553851 CHTF8P0CG12 524 aa12.88□□□□□ -0.35
PRAF2-202ENST00000553851 TNFRSF6BO95407 300 aa12.88□□□□□ -0.35
PRAF2-202ENST00000553851 SMAGPQ0VAQ4 97 aa12.88□□□□□ -0.35
PRAF2-202ENST00000553851 CTDSP1Q9GZU7 261 aa12.88□□□□□ -0.35
PRAF2-202ENST00000553851 UBE2D4Q9Y2X8 147 aa12.88□□□□□ -0.35
PRAF2-202ENST00000553851 CSDC2Q9Y534 153 aaKnown RBP12.88□□□□□ -0.35
PRAF2-202ENST00000553851 IGHV1-58A0A0C4DH39 117 aa12.87□□□□□ -0.35
PRAF2-202ENST00000553851 KRTAP29-1A8MX34 341 aaPredicted RBP12.87□□□□□ -0.35
PRAF2-202ENST00000553851 D6R8Y8 96 aa12.87□□□□□ -0.35
PRAF2-202ENST00000553851 COX6A2Q02221 97 aa12.87□□□□□ -0.35
PRAF2-202ENST00000553851 CD164L2Q6UWJ8 174 aa12.87□□□□□ -0.35
PRAF2-202ENST00000553851 A0A087WYN8 130 aa12.86□□□□□ -0.35
PRAF2-202ENST00000553851 RPL32P62910 135 aaKnown RBP12.86□□□□□ -0.35
PRAF2-202ENST00000553851 SLC7A5P1Q8MH63 180 aa12.86□□□□□ -0.35
PRAF2-202ENST00000553851 SPACA4Q8TDM5 124 aa12.86□□□□□ -0.35
PRAF2-202ENST00000553851 TMEM18Q96B42 140 aa12.86□□□□□ -0.35
PRAF2-202ENST00000553851 RHEBQ15382 184 aa12.85□□□□□ -0.35
PRAF2-202ENST00000553851 RNASE13Q5GAN3 156 aaKnown RBP12.85□□□□□ -0.35
PRAF2-202ENST00000553851 PRSS3P2Q8NHM4 247 aa12.85□□□□□ -0.35
PRAF2-202ENST00000553851 C1orf196B1AJZ1 125 aa12.84□□□□□ -0.35
PRAF2-202ENST00000553851 APOC3P02656 99 aa12.84□□□□□ -0.35
PRAF2-202ENST00000553851 SVBPQ8N300 66 aa12.84□□□□□ -0.35
PRAF2-202ENST00000553851 LINC00526Q96FQ7 95 aa12.84□□□□□ -0.35
PRAF2-202ENST00000553851 IMMP2LQ96T52 175 aa12.84□□□□□ -0.35
PRAF2-202ENST00000553851 SMIM2Q9BVW6 85 aa12.84□□□□□ -0.35
PRAF2-202ENST00000553851 TCAPO15273 167 aa12.83□□□□□ -0.36
PRAF2-202ENST00000553851 NPYP01303 97 aa12.83□□□□□ -0.36
PRAF2-202ENST00000553851 ATP5L2Q7Z4Y8 100 aa12.83□□□□□ -0.36
PRAF2-202ENST00000553851 TIMM21Q9BVV7 248 aa12.83□□□□□ -0.36
PRAF2-202ENST00000553851 PKHD1L1Q86WI1 4243 aa12.83□□□□□ -0.36
PRAF2-202ENST00000553851 LRP1Q07954 4544 aaKnown RBP12.82□□□□□ -0.36
PRAF2-202ENST00000553851 TRAV13-1A0A0B4J241 112 aa12.82□□□□□ -0.36
PRAF2-202ENST00000553851 SNAPINO95295 136 aa12.82□□□□□ -0.36
PRAF2-202ENST00000553851 PPBPP02775 128 aa12.82□□□□□ -0.36
PRAF2-202ENST00000553851 Q6ZUT4 128 aa12.82□□□□□ -0.36
PRAF2-202ENST00000553851 IGKV2-24A0A0C4DH68 120 aa12.81□□□□□ -0.36
PRAF2-202ENST00000553851 PHOX2AO14813 284 aa12.81□□□□□ -0.36
PRAF2-202ENST00000553851 RPL39P62891 51 aaKnown RBP12.81□□□□□ -0.36
PRAF2-202ENST00000553851 PLAC8Q9NZF1 115 aa12.81□□□□□ -0.36
PRAF2-202ENST00000553851 ZNF561-AS1K7EIQ3 104 aa12.8□□□□□ -0.36
PRAF2-202ENST00000553851 MALP21145 153 aa12.8□□□□□ -0.36
PRAF2-202ENST00000553851 MAJINQ3KP22 176 aa12.8□□□□□ -0.36
PRAF2-202ENST00000553851 TMEM136Q6ZRR5 245 aa12.8□□□□□ -0.36
PRAF2-202ENST00000553851 ORMDL3Q8N138 153 aa12.8□□□□□ -0.36
PRAF2-202ENST00000553851 COX7A2LO14548 114 aa12.79□□□□□ -0.36
PRAF2-202ENST00000553851 HNRNPA3P51991 378 aaKnown RBP12.79□□□□□ -0.36
PRAF2-202ENST00000553851 CARD19Q96LW7 228 aa12.79□□□□□ -0.36
PRAF2-202ENST00000553851 RPS10P5Q9NQ39 176 aa12.79□□□□□ -0.36
PRAF2-202ENST00000553851 FAT3Q8TDW7 4589 aa12.78□□□□□ -0.36
PRAF2-202ENST00000553851 PRELID3AQ96N28 172 aa12.78□□□□□ -0.36
PRAF2-202ENST00000553851 TRAV9-1A0A075B6T8 112 aa12.77□□□□□ -0.37
PRAF2-202ENST00000553851 OXTP01178 125 aa12.77□□□□□ -0.37
PRAF2-202ENST00000553851 SYCNQ0VAF6 134 aa12.77□□□□□ -0.37
PRAF2-202ENST00000553851 A0A096LNI7 61 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms