RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 SULT1A2P50226 295 aa4.42□□□□□ -1.7
PRKCH-205ENST00000553726 NKX2-5P52952 324 aaPredicted RBP4.42□□□□□ -1.7
PRKCH-205ENST00000553726 CCL20P78556 96 aa4.42□□□□□ -1.7
PRKCH-205ENST00000553726 COTL1Q14019 142 aa4.42□□□□□ -1.7
PRKCH-205ENST00000553726 C9orf62Q8N4C0 152 aa4.42□□□□□ -1.7
PRKCH-205ENST00000553726 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
PRKCH-205ENST00000553726 GNG13Q9P2W3 67 aa4.42□□□□□ -1.7
PRKCH-205ENST00000553726 PKIGQ9Y2B9 76 aa4.42□□□□□ -1.7
PRKCH-205ENST00000553726 IGLV4-60A0A075B6I1 120 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 H7C423 109 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 PANO1I0J062 215 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 NCR2O95944 276 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 RPS10P46783 165 aaKnown RBP4.41□□□□□ -1.7
PRKCH-205ENST00000553726 GNG4P50150 75 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 HNRNPA3P51991 378 aaKnown RBP4.41□□□□□ -1.7
PRKCH-205ENST00000553726 CENPWQ5EE01 88 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 TEX261Q6UWH6 196 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 SPACA4Q8TDM5 124 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 FAM210AQ96ND0 272 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 PLAC8Q9NZF1 115 aa4.41□□□□□ -1.7
PRKCH-205ENST00000553726 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.7
PRKCH-205ENST00000553726 NDUFS6O75380 124 aaKnown RBP4.4□□□□□ -1.71
PRKCH-205ENST00000553726 MT1HL1P0DM35 61 aa4.4□□□□□ -1.71
PRKCH-205ENST00000553726 TAGLN2P37802 199 aaKnown RBP4.4□□□□□ -1.71
PRKCH-205ENST00000553726 MEF2BQ02080 365 aaPredicted RBP4.4□□□□□ -1.71
PRKCH-205ENST00000553726 LYZL1Q6UWQ5 148 aa4.4□□□□□ -1.71
PRKCH-205ENST00000553726 SMIM15Q7Z3B0 74 aa4.4□□□□□ -1.71
PRKCH-205ENST00000553726 CNFNQ9BYD5 112 aa4.4□□□□□ -1.71
PRKCH-205ENST00000553726 MED9Q9NWA0 146 aa4.4□□□□□ -1.71
PRKCH-205ENST00000553726 LINC00474Q9P2X8 69 aa4.4□□□□□ -1.71
PRKCH-205ENST00000553726 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.71
PRKCH-205ENST00000553726 RAB19A4D1S5 217 aa4.39□□□□□ -1.71
PRKCH-205ENST00000553726 SMLR1H3BR10 107 aa4.39□□□□□ -1.71
PRKCH-205ENST00000553726 AMMECR1LQ6DCA0 310 aa4.39□□□□□ -1.71
PRKCH-205ENST00000553726 CFC1BP0CG36 223 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 CFC1P0CG37 223 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 ZNF25P17030 456 aaPredicted RBP4.38□□□□□ -1.71
PRKCH-205ENST00000553726 CTRLP40313 264 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 COX6A2Q02221 97 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 RNASEKQ6P5S7 137 aaKnown RBP4.38□□□□□ -1.71
PRKCH-205ENST00000553726 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 GATD1Q8NB37 220 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 BTF3L4Q96K17 158 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 LINC01600Q96MT4 127 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 GFRA4Q9GZZ7 299 aa4.38□□□□□ -1.71
PRKCH-205ENST00000553726 UBR4Q5T4S7 5183 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 GVQW2A0A096LPI5 108 aaPredicted RBP4.37□□□□□ -1.71
PRKCH-205ENST00000553726 PHOX2AO14813 284 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 APCSP02743 223 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 CHTF8P0CG12 524 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 MAJINQ3KP22 176 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 STPG4Q8N801 248 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 OR5A1Q8NGJ0 315 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 GTSF1Q8WW33 167 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 CHCHD10Q8WYQ3 142 aaPredicted RBP4.37□□□□□ -1.71
PRKCH-205ENST00000553726 TMEM101Q96IK0 257 aa4.37□□□□□ -1.71
PRKCH-205ENST00000553726 RPP21Q9H633 154 aaKnown RBP4.37□□□□□ -1.71
PRKCH-205ENST00000553726 TRBV20OR9-2A0A075B6H5 130 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 IGHV1-58A0A0C4DH39 117 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 IGKV3OR2-268A0A0C4DH90 116 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 A8MWL6 223 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 I3L3M4 83 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 BCL2P10415 239 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 FGF6P10767 208 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 PMCHP20382 165 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 PAPPA-AS1Q5QFB9 102 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 REG3GQ6UW15 175 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 SPINK6Q6UWN8 80 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
PRKCH-205ENST00000553726 IGKV2-24A0A0C4DH68 120 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 A0A0J9YXV3 536 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 TRBV6-5A0A0K0K1A5 114 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 SDHAF1A6NFY7 115 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 CCL25O15444 150 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 FOXA3P55318 350 aaPredicted RBP4.35□□□□□ -1.71
PRKCH-205ENST00000553726 PRR3P79522 188 aaKnown RBP4.35□□□□□ -1.71
PRKCH-205ENST00000553726 SMAGPQ0VAQ4 97 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 SS18Q15532 418 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 HIGD2BQ4VC39 106 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 OCC1Q8TAD7 63 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 BORCS7Q96B45 105 aa4.35□□□□□ -1.71
PRKCH-205ENST00000553726 RNASE7Q9H1E1 156 aaKnown RBP4.35□□□□□ -1.71
PRKCH-205ENST00000553726 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.34□□□□□ -1.71
PRKCH-205ENST00000553726 TRAV26-2A0A0B4J265 109 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 LINC00959A0A1B0GUT2 108 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 IGKV2-29A2NJV5 120 aaPredicted RBP4.34□□□□□ -1.71
PRKCH-205ENST00000553726 TMEM250H0YL14 139 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 GATCO43716 136 aaKnown RBP4.34□□□□□ -1.71
PRKCH-205ENST00000553726 ESDP10768 282 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 Q6ZRP5 223 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 FAM231DQ6ZW35 169 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 SLC51BQ86UW2 128 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 LYPD6BQ8NI32 183 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 ISOC2Q96AB3 205 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 MRAP2Q96G30 205 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 ST20Q9HBF5 79 aa4.34□□□□□ -1.71
PRKCH-205ENST00000553726 A0A096LNI7 61 aa4.33□□□□□ -1.72
PRKCH-205ENST00000553726 FAM231BA6NCW3 169 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms