RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.61
ACTN1-209ENST00000553659 COTL1Q14019 142 aa11.2□□□□□ -0.62
ACTN1-209ENST00000553659 TMEM97Q5BJF2 176 aa11.2□□□□□ -0.62
ACTN1-209ENST00000553659 ZC2HC1BQ5TFG8 222 aa11.2□□□□□ -0.62
ACTN1-209ENST00000553659 STPG4Q8N801 248 aa11.2□□□□□ -0.62
ACTN1-209ENST00000553659 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
ACTN1-209ENST00000553659 EMP1P54849 157 aa11.19□□□□□ -0.62
ACTN1-209ENST00000553659 COL5A1-AS1Q5SY13 56 aa11.19□□□□□ -0.62
ACTN1-209ENST00000553659 Q6ZR54 194 aa11.19□□□□□ -0.62
ACTN1-209ENST00000553659 Q6ZTI0 123 aa11.19□□□□□ -0.62
ACTN1-209ENST00000553659 DAZ4Q86SG3 579 aaKnown RBP11.19□□□□□ -0.62
ACTN1-209ENST00000553659 UBE2DNLQ8IWF7 75 aa11.19□□□□□ -0.62
ACTN1-209ENST00000553659 DAZ3Q9NR90 486 aaKnown RBP11.19□□□□□ -0.62
ACTN1-209ENST00000553659 FAT2Q9NYQ8 4349 aa11.19□□□□□ -0.62
ACTN1-209ENST00000553659 TRBV7-3A0A075B6L6 115 aa11.18□□□□□ -0.62
ACTN1-209ENST00000553659 TRGV2A0A075B6R0 118 aa11.18□□□□□ -0.62
ACTN1-209ENST00000553659 TEX48A0A1B0GUV7 120 aa11.18□□□□□ -0.62
ACTN1-209ENST00000553659 PLAC8L1A1L4L8 177 aa11.18□□□□□ -0.62
ACTN1-209ENST00000553659 NMUP48645 174 aa11.18□□□□□ -0.62
ACTN1-209ENST00000553659 HERVK_113P61574 105 aa11.18□□□□□ -0.62
ACTN1-209ENST00000553659 SPANXA1Q9NS26 97 aa11.18□□□□□ -0.62
ACTN1-209ENST00000553659 DNAH17Q9UFH2 4485 aa11.18□□□□□ -0.62
ACTN1-209ENST00000553659 DNAH2Q9P225 4427 aa11.17□□□□□ -0.62
ACTN1-209ENST00000553659 TRBV6-4A0A1B0GX49 114 aa11.17□□□□□ -0.62
ACTN1-209ENST00000553659 FGF6P10767 208 aa11.17□□□□□ -0.62
ACTN1-209ENST00000553659 RPL39P62891 51 aaKnown RBP11.17□□□□□ -0.62
ACTN1-209ENST00000553659 Q6ZSN1 163 aa11.17□□□□□ -0.62
ACTN1-209ENST00000553659 CST9LQ9H4G1 147 aa11.17□□□□□ -0.62
ACTN1-209ENST00000553659 PKHD1P08F94 4074 aa11.16□□□□□ -0.62
ACTN1-209ENST00000553659 FAM222AQ5U5X8 452 aa11.16□□□□□ -0.62
ACTN1-209ENST00000553659 ZNF479Q96JC4 524 aa11.16□□□□□ -0.62
ACTN1-209ENST00000553659 GAGE12BA1L429 117 aa11.15□□□□□ -0.62
ACTN1-209ENST00000553659 GAGE7O76087 117 aa11.15□□□□□ -0.62
ACTN1-209ENST00000553659 GAGE12FP0CL80 117 aa11.15□□□□□ -0.62
ACTN1-209ENST00000553659 GAGE12GP0CL81 117 aa11.15□□□□□ -0.62
ACTN1-209ENST00000553659 GAGE12IP0CL82 117 aa11.15□□□□□ -0.62
ACTN1-209ENST00000553659 LINC00612Q8N6U2 182 aa11.15□□□□□ -0.62
ACTN1-209ENST00000553659 TIMM21Q9BVV7 248 aa11.15□□□□□ -0.62
ACTN1-209ENST00000553659 VCX2Q9H322 139 aa11.15□□□□□ -0.62
ACTN1-209ENST00000553659 HIGD1BQ9P298 99 aa11.15□□□□□ -0.62
ACTN1-209ENST00000553659 LYRM9A8MSI8 78 aa11.14□□□□□ -0.63
ACTN1-209ENST00000553659 BATFQ16520 125 aa11.14□□□□□ -0.63
ACTN1-209ENST00000553659 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
ACTN1-209ENST00000553659 TRGV4A0A0C4DH28 118 aa11.13□□□□□ -0.63
ACTN1-209ENST00000553659 C11orf86A6NJI1 115 aa11.13□□□□□ -0.63
ACTN1-209ENST00000553659 E9PLD3 99 aa11.13□□□□□ -0.63
ACTN1-209ENST00000553659 HTN3P15516 51 aa11.13□□□□□ -0.63
ACTN1-209ENST00000553659 HSD52Q0P140 79 aa11.13□□□□□ -0.63
ACTN1-209ENST00000553659 C2orf91Q6ZV80 131 aa11.13□□□□□ -0.63
ACTN1-209ENST00000553659 NFE4Q86UQ8 179 aa11.13□□□□□ -0.63
ACTN1-209ENST00000553659 ZNRF2Q8NHG8 242 aa11.13□□□□□ -0.63
ACTN1-209ENST00000553659 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
ACTN1-209ENST00000553659 RYR1P21817 5038 aa11.12□□□□□ -0.63
ACTN1-209ENST00000553659 IGLV4-3A0A075B6K6 122 aa11.12□□□□□ -0.63
ACTN1-209ENST00000553659 HINT1P49773 126 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-209ENST00000553659 UBE2D3P61077 147 aa11.12□□□□□ -0.63
ACTN1-209ENST00000553659 UBE2D2P62837 147 aa11.12□□□□□ -0.63
ACTN1-209ENST00000553659 MRPS36P82909 103 aaKnown RBP11.12□□□□□ -0.63
ACTN1-209ENST00000553659 C1orf134Q5TEV5 83 aa11.12□□□□□ -0.63
ACTN1-209ENST00000553659 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
ACTN1-209ENST00000553659 AMELXQ99217 191 aa11.12□□□□□ -0.63
ACTN1-209ENST00000553659 GTSF1LQ9H1H1 148 aa11.12□□□□□ -0.63
ACTN1-209ENST00000553659 IGLV4-69A0A075B6H9 119 aa11.11□□□□□ -0.63
ACTN1-209ENST00000553659 PKD1P98161 4303 aa11.11□□□□□ -0.63
ACTN1-209ENST00000553659 DYNC1H1Q14204 4646 aaKnown RBP11.1□□□□□ -0.63
ACTN1-209ENST00000553659 H7C423 109 aa11.1□□□□□ -0.63
ACTN1-209ENST00000553659 DAD1P61803 113 aa11.1□□□□□ -0.63
ACTN1-209ENST00000553659 SEC11AP67812 179 aa11.1□□□□□ -0.63
ACTN1-209ENST00000553659 PCP2Q8IVA1 136 aa11.1□□□□□ -0.63
ACTN1-209ENST00000553659 KRTAP4-5Q9BYR2 181 aa11.1□□□□□ -0.63
ACTN1-209ENST00000553659 UBE2D4Q9Y2X8 147 aa11.1□□□□□ -0.63
ACTN1-209ENST00000553659 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
ACTN1-209ENST00000553659 MPV17L2Q567V2 206 aa11.09□□□□□ -0.63
ACTN1-209ENST00000553659 BVES-AS1Q5T3Y7 98 aa11.09□□□□□ -0.63
ACTN1-209ENST00000553659 C15orf53Q8NAA6 179 aa11.09□□□□□ -0.63
ACTN1-209ENST00000553659 CSDC2Q9Y534 153 aaKnown RBP11.09□□□□□ -0.63
ACTN1-209ENST00000553659 DNAH11Q96DT5 4516 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 A0A1B0GV90 55 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 GAGE12JA6NER3 117 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 GAGE1Q13065 139 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 GAGE4Q13068 117 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 GAGE5Q13069 117 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 TAL2Q16559 108 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 DGAT2L7PQ6IED9 249 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 CHAC1Q9BUX1 264 aa11.08□□□□□ -0.64
ACTN1-209ENST00000553659 MYMXA0A1B0GTQ4 84 aa11.07□□□□□ -0.64
ACTN1-209ENST00000553659 FHL2Q14192 279 aa11.07□□□□□ -0.64
ACTN1-209ENST00000553659 TRAV8-6A0A0B4J262 113 aa11.06□□□□□ -0.64
ACTN1-209ENST00000553659 IGHV3-38A0A0C4DH36 116 aa11.06□□□□□ -0.64
ACTN1-209ENST00000553659 A6NDN8 102 aa11.06□□□□□ -0.64
ACTN1-209ENST00000553659 TMEM170BQ5T4T1 132 aa11.06□□□□□ -0.64
ACTN1-209ENST00000553659 DEFB104AQ8WTQ1 72 aa11.06□□□□□ -0.64
ACTN1-209ENST00000553659 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
ACTN1-209ENST00000553659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-209ENST00000553659 TINCRA0A1B0GVN0 87 aa11.05□□□□□ -0.64
ACTN1-209ENST00000553659 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-209ENST00000553659 ORAOV1Q8WV07 137 aa11.05□□□□□ -0.64
ACTN1-209ENST00000553659 TMEM243Q9BU79 118 aa11.05□□□□□ -0.64
ACTN1-209ENST00000553659 Q9UF83 564 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms