RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TMEM242Q9NWH2 141 aa5.5□□□□□ -1.53
SYNE2-209ENST00000553308 I3L3M4 83 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 TSHBP01222 138 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 IGLV7-43P04211 117 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 ESDP10768 282 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 PMCHP20382 165 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 EIF5AP63241 154 aaKnown RBP5.49□□□□□ -1.53
SYNE2-209ENST00000553308 ZNF345Q14585 488 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 PRR4Q16378 134 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 EIF5AL1Q6IS14 154 aaKnown RBP5.49□□□□□ -1.53
SYNE2-209ENST00000553308 DIRC1Q969H9 104 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 MRAP2Q96G30 205 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 CAMK2N2Q96S95 79 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 CDC42SE2Q9NRR3 84 aa5.49□□□□□ -1.53
SYNE2-209ENST00000553308 H0Y9J4 135 aa5.48□□□□□ -1.53
SYNE2-209ENST00000553308 BCL2L11O43521 198 aa5.48□□□□□ -1.53
SYNE2-209ENST00000553308 MALP21145 153 aa5.48□□□□□ -1.53
SYNE2-209ENST00000553308 KRTAP11-1Q8IUC1 163 aa5.48□□□□□ -1.53
SYNE2-209ENST00000553308 OPRPNQ99935 248 aaPredicted RBP5.48□□□□□ -1.53
SYNE2-209ENST00000553308 RNASE7Q9H1E1 156 aaKnown RBP5.48□□□□□ -1.53
SYNE2-209ENST00000553308 RPP21Q9H633 154 aaKnown RBP5.48□□□□□ -1.53
SYNE2-209ENST00000553308 BIN3Q9NQY0 253 aa5.48□□□□□ -1.53
SYNE2-209ENST00000553308 TRAV1-1A0A0B4J248 108 aa5.47□□□□□ -1.53
SYNE2-209ENST00000553308 TRBV6-5A0A0K0K1A5 114 aa5.47□□□□□ -1.53
SYNE2-209ENST00000553308 A0A0U1RQV1 116 aa5.47□□□□□ -1.53
SYNE2-209ENST00000553308 COX7A2LO14548 114 aa5.47□□□□□ -1.53
SYNE2-209ENST00000553308 KRTAP1-4P0C5Y4 121 aa5.47□□□□□ -1.53
SYNE2-209ENST00000553308 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
SYNE2-209ENST00000553308 TEX261Q6UWH6 196 aa5.47□□□□□ -1.53
SYNE2-209ENST00000553308 SMIM15Q7Z3B0 74 aa5.47□□□□□ -1.53
SYNE2-209ENST00000553308 MRPL52Q86TS9 123 aaKnown RBP5.47□□□□□ -1.53
SYNE2-209ENST00000553308 MED9Q9NWA0 146 aa5.47□□□□□ -1.53
SYNE2-209ENST00000553308 IGLV1-50A0A075B6I6 118 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 A0A087WZ39 114 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 KANTRA0A1W2PQU2 76 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 FAM168BA1KXE4 195 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 C7orf77A4D0Y5 90 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 K7EN84 100 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 PDE6DO43924 150 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 C2orf48Q96LS8 159 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 ST20Q9HBF5 79 aa5.46□□□□□ -1.54
SYNE2-209ENST00000553308 C1orf196B1AJZ1 125 aa5.45□□□□□ -1.54
SYNE2-209ENST00000553308 SPAG11BQ08648 103 aa5.45□□□□□ -1.54
SYNE2-209ENST00000553308 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
SYNE2-209ENST00000553308 C5orf38Q86SI9 138 aa5.45□□□□□ -1.54
SYNE2-209ENST00000553308 MUC2Q02817 5179 aa5.44□□□□□ -1.54
SYNE2-209ENST00000553308 TRAV13-1A0A0B4J241 112 aa5.44□□□□□ -1.54
SYNE2-209ENST00000553308 HMSDA8MTL9 139 aa5.44□□□□□ -1.54
SYNE2-209ENST00000553308 UBE2D1P51668 147 aa5.44□□□□□ -1.54
SYNE2-209ENST00000553308 POLR2KP53803 58 aaKnown RBP5.44□□□□□ -1.54
SYNE2-209ENST00000553308 FAM19A5Q7Z5A7 132 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-209ENST00000553308 OCC1Q8TAD7 63 aa5.44□□□□□ -1.54
SYNE2-209ENST00000553308 TRBV27A0A0K0K1C4 114 aa5.43□□□□□ -1.54
SYNE2-209ENST00000553308 TEX46H3BTG2 121 aa5.43□□□□□ -1.54
SYNE2-209ENST00000553308 RNF151Q2KHN1 245 aa5.43□□□□□ -1.54
SYNE2-209ENST00000553308 Q6ZUT4 128 aa5.43□□□□□ -1.54
SYNE2-209ENST00000553308 UBE2D4Q9Y2X8 147 aa5.43□□□□□ -1.54
SYNE2-209ENST00000553308 GATCO43716 136 aaKnown RBP5.42□□□□□ -1.54
SYNE2-209ENST00000553308 C10orf25Q5T742 122 aa5.42□□□□□ -1.54
SYNE2-209ENST00000553308 KRTAP7-1Q8IUC3 87 aa5.42□□□□□ -1.54
SYNE2-209ENST00000553308 TSKUQ8WUA8 353 aa5.42□□□□□ -1.54
SYNE2-209ENST00000553308 FAM210AQ96ND0 272 aa5.42□□□□□ -1.54
SYNE2-209ENST00000553308 MRPL35Q9NZE8 188 aaKnown RBP5.42□□□□□ -1.54
SYNE2-209ENST00000553308 CSDC2Q9Y534 153 aaKnown RBP5.42□□□□□ -1.54
SYNE2-209ENST00000553308 SMKR1H3BMG3 65 aa5.41□□□□□ -1.54
SYNE2-209ENST00000553308 FCER1GP30273 86 aa5.41□□□□□ -1.54
SYNE2-209ENST00000553308 RPL13AP40429 203 aaKnown RBP5.41□□□□□ -1.54
SYNE2-209ENST00000553308 AMN1Q8IY45 258 aa5.41□□□□□ -1.54
SYNE2-209ENST00000553308 OR10D4PQ8NGN7 298 aa5.41□□□□□ -1.54
SYNE2-209ENST00000553308 ORAOV1Q8WV07 137 aa5.41□□□□□ -1.54
SYNE2-209ENST00000553308 A8MWL6 223 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 M0QXV9 152 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 NDUFA1O15239 70 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 TSPAN13O95857 204 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 RAB4AP20338 218 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 UBE2BP63146 152 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 GAGE2EQ4V326 116 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 UNQ6190/PRO20217Q6UXQ8 127 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 BORCS7Q96B45 105 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 IMMP2LQ96T52 175 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 TMEM191AQ9H0A3 160 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 C6orf48Q9UBA6 75 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 GAGE2DQ9UEU5 116 aa5.4□□□□□ -1.54
SYNE2-209ENST00000553308 VCYO14598 125 aa5.39□□□□□ -1.55
SYNE2-209ENST00000553308 TLX1NBP0CAT3 122 aa5.39□□□□□ -1.55
SYNE2-209ENST00000553308 RGS21Q2M5E4 152 aa5.39□□□□□ -1.55
SYNE2-209ENST00000553308 FAM231DQ6ZW35 169 aa5.39□□□□□ -1.55
SYNE2-209ENST00000553308 NRACQ8N912 160 aa5.39□□□□□ -1.55
SYNE2-209ENST00000553308 SMDT1Q9H4I9 107 aa5.39□□□□□ -1.55
SYNE2-209ENST00000553308 IGHV3OR16-9A0A0B4J2B5 98 aa5.38□□□□□ -1.55
SYNE2-209ENST00000553308 A0A1B0GUT8 65 aa5.38□□□□□ -1.55
SYNE2-209ENST00000553308 HIGD1CA8MV81 97 aa5.38□□□□□ -1.55
SYNE2-209ENST00000553308 F8WDY8 70 aa5.38□□□□□ -1.55
SYNE2-209ENST00000553308 SUMO2P61956 95 aaKnown RBP5.38□□□□□ -1.55
SYNE2-209ENST00000553308 SMAGPQ0VAQ4 97 aa5.38□□□□□ -1.55
SYNE2-209ENST00000553308 CT83Q5H943 113 aa5.38□□□□□ -1.55
SYNE2-209ENST00000553308 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
SYNE2-209ENST00000553308 FAM104AQ969W3 186 aa5.38□□□□□ -1.55
SYNE2-209ENST00000553308 KIR2DL4Q99706 377 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms