RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-204	ENST00000553265	LINC00337	Q8N6G1	96 aa		4.26	□□□□□ -1.73
PRKCH-204	ENST00000553265	RPS10P5	Q9NQ39	176 aa		4.26	□□□□□ -1.73
PRKCH-204	ENST00000553265	ZNF586	Q9NXT0	402 aa		4.26	□□□□□ -1.73
PRKCH-204	ENST00000553265	RPL23	P62829	140 aa	Known RBP	4.25	□□□□□ -1.73
PRKCH-204	ENST00000553265	UBE2L3	P68036	154 aa	Known RBP	4.25	□□□□□ -1.73
PRKCH-204	ENST00000553265	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.25	□□□□□ -1.73
PRKCH-204	ENST00000553265		Q8NAQ8	132 aa		4.25	□□□□□ -1.73
PRKCH-204	ENST00000553265	DCANP1	Q8TF63	244 aa		4.25	□□□□□ -1.73
PRKCH-204	ENST00000553265	GTSF1L	Q9H1H1	148 aa		4.25	□□□□□ -1.73
PRKCH-204	ENST00000553265	TMEM167B	Q9NRX6	74 aa		4.25	□□□□□ -1.73
PRKCH-204	ENST00000553265	APLN	Q9ULZ1	77 aa		4.25	□□□□□ -1.73
PRKCH-204	ENST00000553265	CYSLTR1	Q9Y271	337 aa		4.25	□□□□□ -1.73
PRKCH-204	ENST00000553265	LINC00862	A6NCI5	91 aa		4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265		M0R381	172 aa		4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	DEFB4A	O15263	64 aa		4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	GPX1	P07203	203 aa		4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	GIG44	P09565	113 aa	Predicted RBP	4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	PDE6H	Q13956	83 aa		4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	COL5A1-AS1	Q5SY13	56 aa		4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	KCNS1	Q96KK3	526 aa		4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	NKX6-2	Q9C056	277 aa	Predicted RBP	4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	MED9	Q9NWA0	146 aa		4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	GNG13	Q9P2W3	67 aa		4.24	□□□□□ -1.73
PRKCH-204	ENST00000553265	IGKV3-7	A0A075B6H7	116 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	TRAV2	A0A0B4J234	112 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	GGTLC3	B5MD39	225 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265		C9JQL5	133 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	PEX7	O00628	323 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	RTL8C	O15255	209 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	CCL25	O15444	150 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	REG3A	Q06141	175 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	ORMDL2	Q53FV1	153 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	GTF2H5	Q6ZYL4	71 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	PRNT	Q86SH4	94 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	LYPD1	Q8N2G4	141 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	TYMSOS	Q8TAI1	123 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	SLC50A1	Q9BRV3	221 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265		Q9H3A6	140 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	MANBAL	Q9NQG1	85 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	NAT8	Q9UHE5	227 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	ARL2-SNX15	V9GYD0	113 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	MYCBP2	O75592	4640 aa		4.23	□□□□□ -1.73
PRKCH-204	ENST00000553265	TRAV9-1	A0A075B6T8	112 aa		4.22	□□□□□ -1.73
PRKCH-204	ENST00000553265	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.22	□□□□□ -1.73
PRKCH-204	ENST00000553265	SRP19	P09132	144 aa	Known RBP	4.22	□□□□□ -1.73
PRKCH-204	ENST00000553265	HLA-DMB	P28068	263 aa		4.22	□□□□□ -1.73
PRKCH-204	ENST00000553265	PRR4	Q16378	134 aa		4.22	□□□□□ -1.73
PRKCH-204	ENST00000553265	RNF182	Q8N6D2	247 aa		4.22	□□□□□ -1.73
PRKCH-204	ENST00000553265	TXNDC17	Q9BRA2	123 aa		4.22	□□□□□ -1.73
PRKCH-204	ENST00000553265	PYGO2	Q9BRQ0	406 aa		4.22	□□□□□ -1.73
PRKCH-204	ENST00000553265	OTOR	Q9NRC9	128 aa		4.22	□□□□□ -1.73
PRKCH-204	ENST00000553265	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	IGLL5	B9A064	214 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	KRBOX1	C9JBD0	128 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	C11orf94	C9JXX5	98 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265		M0R3E3	92 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	DNASE2	O00115	360 aa	Predicted RBP	4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	NCR2	O95944	276 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	SLC25A5	P05141	298 aa	Known RBP	4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265		P0DMU3	169 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	FAM231A	P0DMU4	169 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	FAM231C	P0DMU5	169 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	MEF2B	Q02080	365 aa	Predicted RBP	4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	PEA15	Q15121	130 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	C5orf17	Q8NAS9	161 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	OR10D4P	Q8NGN7	298 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	SMDT1	Q9H4I9	107 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	EPDR1	Q9UM22	224 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	CELA1	Q9UNI1	258 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	NACA	E9PAV3	2078 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265	VPS13B	Q7Z7G8	4022 aa		4.21	□□□□□ -1.74
PRKCH-204	ENST00000553265		H7BYZ3	331 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265		J3QQQ9	107 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	UBE2L6	O14933	153 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	TCRA	P04437	139 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	ZNF688	P0C7X2	276 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	CHTF8	P0CG12	524 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	PRB4	P10163	310 aa	Predicted RBP	4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	DEFB1	P60022	68 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	PRR15	Q8IV56	129 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	CMTM2	Q8TAZ6	248 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	LINC00052	Q96N35	136 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	TIMM17A	Q99595	171 aa		4.2	□□□□□ -1.74
PRKCH-204	ENST00000553265	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	TRBV20OR9-2	A0A075B6H5	130 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	TRAV10	A0A0B4J240	114 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	RBAKDN	A6NC62	111 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	NDUFC2-KCTD14	E9PQ53	114 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	COX7A2L	O14548	114 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	IGKV2D-40	P01614	121 aa	Predicted RBP	4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	MIF	P14174	115 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	CSN1S1	P47710	185 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	CMC4	P56277	68 aa	Predicted RBP	4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	NDUFA6	P56556	154 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	DEFB131A	P59861	70 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	KRTAP10-12	P60413	245 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	SNRPD3	P62318	126 aa	Known RBP	4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	PSMG4	Q5JS54	123 aa		4.19	□□□□□ -1.74
PRKCH-204	ENST00000553265	GDF5OS	Q5U4N7	250 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms