RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 SHISA2Q6UWI4 295 aa8.47□□□□□ -1.05
PPFIA2-227ENST00000552948 LINC00308Q8TCZ7 52 aa8.47□□□□□ -1.05
PPFIA2-227ENST00000552948 NRGNQ92686 78 aa8.47□□□□□ -1.05
PPFIA2-227ENST00000552948 SPANXDQ9BXN6 97 aa8.47□□□□□ -1.05
PPFIA2-227ENST00000552948 SPANXCQ9NY87 97 aa8.47□□□□□ -1.05
PPFIA2-227ENST00000552948 PYGO1Q9Y3Y4 419 aa8.47□□□□□ -1.05
PPFIA2-227ENST00000552948 CENPEQ02224 2701 aa8.47□□□□□ -1.05
PPFIA2-227ENST00000552948 UBE2D4Q9Y2X8 147 aa8.46□□□□□ -1.05
PPFIA2-227ENST00000552948 FN1P02751 2386 aaKnown RBP8.46□□□□□ -1.05
PPFIA2-227ENST00000552948 MYO18BQ8IUG5 2567 aa8.46□□□□□ -1.05
PPFIA2-227ENST00000552948 A0A1W2PRX2 142 aa8.46□□□□□ -1.05
PPFIA2-227ENST00000552948 B4DSR2 109 aa8.46□□□□□ -1.05
PPFIA2-227ENST00000552948 RPL36AP83881 106 aaKnown RBP8.46□□□□□ -1.05
PPFIA2-227ENST00000552948 RPL36ALQ969Q0 106 aaKnown RBP8.46□□□□□ -1.05
PPFIA2-227ENST00000552948 IGLV1-40P01703 118 aa8.46□□□□□ -1.06
PPFIA2-227ENST00000552948 AVPP01185 164 aa8.46□□□□□ -1.06
PPFIA2-227ENST00000552948 PFN2P35080 140 aa8.46□□□□□ -1.06
PPFIA2-227ENST00000552948 HERVK_113P63121 156 aa8.46□□□□□ -1.06
PPFIA2-227ENST00000552948 Q6Q795 121 aa8.46□□□□□ -1.06
PPFIA2-227ENST00000552948 NAV2Q8IVL1 2488 aa8.45□□□□□ -1.06
PPFIA2-227ENST00000552948 MRPL23Q16540 153 aaKnown RBP8.45□□□□□ -1.06
PPFIA2-227ENST00000552948 LITAFQ99732 161 aa8.45□□□□□ -1.06
PPFIA2-227ENST00000552948 COX7A2LO14548 114 aa8.45□□□□□ -1.06
PPFIA2-227ENST00000552948 PAX4O43316 350 aa8.45□□□□□ -1.06
PPFIA2-227ENST00000552948 COX6A2Q02221 97 aa8.45□□□□□ -1.06
PPFIA2-227ENST00000552948 TRGV2A0A075B6R0 118 aa8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 IGKV3D-7A0A0C4DH55 119 aa8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 RBMY1A1P0DJD3 496 aaKnown RBP8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 RBMY1CP0DJD4 496 aa8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 RBMY1FQ15415 496 aaKnown RBP8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 KLK9Q2XQG4 91 aa8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 STHQ8IWL8 128 aa8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 C10orf105Q8TEF2 133 aa8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 HRNRQ86YZ3 2850 aaPredicted RBP8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 INSP01308 110 aa8.44□□□□□ -1.06
PPFIA2-227ENST00000552948 M0QXV9 152 aa8.43□□□□□ -1.06
PPFIA2-227ENST00000552948 PSMB8P28062 276 aa8.43□□□□□ -1.06
PPFIA2-227ENST00000552948 CHCHD7Q9BUK0 85 aa8.43□□□□□ -1.06
PPFIA2-227ENST00000552948 NDUFA1O15239 70 aa8.42□□□□□ -1.06
PPFIA2-227ENST00000552948 Q8N2B8 174 aa8.42□□□□□ -1.06
PPFIA2-227ENST00000552948 ATP5G1P05496 136 aa8.42□□□□□ -1.06
PPFIA2-227ENST00000552948 ACYP1P07311 99 aa8.42□□□□□ -1.06
PPFIA2-227ENST00000552948 HIST1H4AP62805 103 aaKnown RBP8.42□□□□□ -1.06
PPFIA2-227ENST00000552948 C18orf65Q6ZTR6 163 aa8.42□□□□□ -1.06
PPFIA2-227ENST00000552948 INAFM2P0DMQ5 153 aa8.42□□□□□ -1.06
PPFIA2-227ENST00000552948 LINC00643Q86TS7 51 aa8.42□□□□□ -1.06
PPFIA2-227ENST00000552948 CELSR1Q9NYQ6 3014 aa8.41□□□□□ -1.06
PPFIA2-227ENST00000552948 NBL1P41271 181 aa8.41□□□□□ -1.06
PPFIA2-227ENST00000552948 CITED2Q99967 270 aaPredicted RBP8.41□□□□□ -1.06
PPFIA2-227ENST00000552948 PEMTQ9UBM1 199 aa8.41□□□□□ -1.06
PPFIA2-227ENST00000552948 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.06
PPFIA2-227ENST00000552948 MIR7-3HGQ8N6C7 128 aa8.4□□□□□ -1.06
PPFIA2-227ENST00000552948 C14orf132Q9NPU4 83 aa8.4□□□□□ -1.06
PPFIA2-227ENST00000552948 KLK5Q9Y337 293 aaPredicted RBP8.4□□□□□ -1.06
PPFIA2-227ENST00000552948 LINC00694P0DN24 101 aa8.4□□□□□ -1.06
PPFIA2-227ENST00000552948 SND1-IT1Q9HBX3 110 aa8.4□□□□□ -1.06
PPFIA2-227ENST00000552948 TIRAPP58753 221 aa8.4□□□□□ -1.07
PPFIA2-227ENST00000552948 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.07
PPFIA2-227ENST00000552948 ABCA2Q9BZC7 2435 aa8.4□□□□□ -1.07
PPFIA2-227ENST00000552948 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.39□□□□□ -1.07
PPFIA2-227ENST00000552948 FAM240AA0A1B0GVK7 77 aa8.39□□□□□ -1.07
PPFIA2-227ENST00000552948 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
PPFIA2-227ENST00000552948 C5orf38Q86SI9 138 aa8.39□□□□□ -1.07
PPFIA2-227ENST00000552948 TRGV4A0A0C4DH28 118 aa8.38□□□□□ -1.07
PPFIA2-227ENST00000552948 ABCA12Q86UK0 2595 aa8.38□□□□□ -1.07
PPFIA2-227ENST00000552948 NOP10Q9NPE3 64 aaKnown RBP8.38□□□□□ -1.07
PPFIA2-227ENST00000552948 TRAV13-2A0A0B4J235 113 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 TIMM17BO60830 172 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 DNAJC30Q96LL9 226 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 TMEM243Q9BU79 118 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 LECT2O14960 151 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 RPL35AP18077 110 aaKnown RBP8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 SOSTDC1Q6X4U4 206 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 Q6ZTI0 123 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 SLPIP03973 132 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 MALP21145 153 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 FAM110AQ9BQ89 295 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 PPDPFQ9H3Y8 114 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 LRRK2Q5S007 2527 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 A0A1B0GX51 115 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 HIST2H2BCQ6DN03 193 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 C3orf22Q8N5N4 141 aa8.37□□□□□ -1.07
PPFIA2-227ENST00000552948 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
PPFIA2-227ENST00000552948 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
PPFIA2-227ENST00000552948 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
PPFIA2-227ENST00000552948 MAP6D1Q9H9H5 199 aa8.36□□□□□ -1.07
PPFIA2-227ENST00000552948 ZFYVE26Q68DK2 2539 aa8.36□□□□□ -1.07
PPFIA2-227ENST00000552948 SMIM1B2RUZ4 78 aa8.36□□□□□ -1.07
PPFIA2-227ENST00000552948 hADV29S1A0JD25 119 aa8.36□□□□□ -1.07
PPFIA2-227ENST00000552948 VPREB3Q9UKI3 123 aa8.35□□□□□ -1.07
PPFIA2-227ENST00000552948 EPG5Q9HCE0 2579 aa8.35□□□□□ -1.07
PPFIA2-227ENST00000552948 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
PPFIA2-227ENST00000552948 UQCRQO14949 82 aa8.35□□□□□ -1.07
PPFIA2-227ENST00000552948 LINC01356Q8N9X3 169 aa8.35□□□□□ -1.07
PPFIA2-227ENST00000552948 TRACP01848 142 aa8.35□□□□□ -1.07
PPFIA2-227ENST00000552948 CLPSL2Q6UWE3 100 aa8.35□□□□□ -1.07
PPFIA2-227ENST00000552948 FAM218AQ96MZ4 157 aa8.35□□□□□ -1.07
PPFIA2-227ENST00000552948 TRBV7-7A0A0K0K1E9 115 aa8.34□□□□□ -1.07
PPFIA2-227ENST00000552948 SMCR5Q8TEV8 140 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms