RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 SAMD10Q9BYL1 202 aa5.47□□□□□ -1.53
PRKCH-203ENST00000552875 GTSF1LQ9H1H1 148 aa5.47□□□□□ -1.53
PRKCH-203ENST00000552875 JPT2Q9H910 190 aa5.47□□□□□ -1.53
PRKCH-203ENST00000552875 TRBV6-5A0A0K0K1A5 114 aa5.46□□□□□ -1.54
PRKCH-203ENST00000552875 LOC100131303A0A0U1RQF7 123 aa5.46□□□□□ -1.54
PRKCH-203ENST00000552875 TRBV6-4A0A1B0GX49 114 aa5.46□□□□□ -1.54
PRKCH-203ENST00000552875 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
PRKCH-203ENST00000552875 PPP1R17O96001 155 aa5.46□□□□□ -1.54
PRKCH-203ENST00000552875 APCSP02743 223 aa5.46□□□□□ -1.54
PRKCH-203ENST00000552875 FABP9Q0Z7S8 132 aa5.46□□□□□ -1.54
PRKCH-203ENST00000552875 ORMDL3Q8N138 153 aa5.46□□□□□ -1.54
PRKCH-203ENST00000552875 OR4C5Q8NGB2 326 aa5.46□□□□□ -1.54
PRKCH-203ENST00000552875 A0A087WWL8 130 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 TRBV10-1A0A0K0K1A3 114 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 PRSS47A8MTI9 375 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 D6R8Y8 96 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 M0QY20 66 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 GATA1P15976 413 aaPredicted RBP5.45□□□□□ -1.54
PRKCH-203ENST00000552875 CKS2P33552 79 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 SSTP61278 116 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 RPL32P62910 135 aaKnown RBP5.45□□□□□ -1.54
PRKCH-203ENST00000552875 Q0VG73 95 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 FAM74A4Q5TZK3 123 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 SUMO4Q6EEV6 95 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 NRACQ8N912 160 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.45□□□□□ -1.54
PRKCH-203ENST00000552875 ALKBH7Q9BT30 221 aaPredicted RBP5.45□□□□□ -1.54
PRKCH-203ENST00000552875 C1orf43Q9BWL3 253 aa5.45□□□□□ -1.54
PRKCH-203ENST00000552875 C1orf196B1AJZ1 125 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST1H2BKO60814 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST1H2BJP06899 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 MGPP08493 103 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST1H2BOP23527 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST1H2BBP33778 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST1H2BDP58876 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 RAB5BP61020 215 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST1H2BCP62807 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 ZNF56Q15929 161 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST2H2BEQ16778 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST1H2BHQ93079 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 UBE2WQ96B02 151 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 DNAJC30Q96LL9 226 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 PRELID3AQ96N28 172 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST1H2BNQ99877 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 HIST1H2BMQ99879 126 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 C20orf78Q9BR46 151 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 PLAC8Q9NZF1 115 aa5.44□□□□□ -1.54
PRKCH-203ENST00000552875 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 USP17L23D6RBM5 183 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 TNFRSF6BO95407 300 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 NPYP01303 97 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 LINC00694P0DN24 101 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 RHOHQ15669 191 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 COA6Q5JTJ3 125 aaKnown RBP5.43□□□□□ -1.54
PRKCH-203ENST00000552875 Q8N3U1 123 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 C18orf32Q8TCD1 76 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 SPACA4Q8TDM5 124 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 NIT2Q9NQR4 276 aa5.43□□□□□ -1.54
PRKCH-203ENST00000552875 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.42□□□□□ -1.54
PRKCH-203ENST00000552875 F5H697 171 aa5.42□□□□□ -1.54
PRKCH-203ENST00000552875 K7EMI3 77 aa5.42□□□□□ -1.54
PRKCH-203ENST00000552875 NCR2O95944 276 aa5.42□□□□□ -1.54
PRKCH-203ENST00000552875 PRSS1P07477 247 aa5.42□□□□□ -1.54
PRKCH-203ENST00000552875 POLR2KP53803 58 aaKnown RBP5.42□□□□□ -1.54
PRKCH-203ENST00000552875 SUMO2P61956 95 aaKnown RBP5.42□□□□□ -1.54
PRKCH-203ENST00000552875 KIAA1644Q3SXP7 199 aa5.42□□□□□ -1.54
PRKCH-203ENST00000552875 SLC25A29Q8N8R3 303 aa5.42□□□□□ -1.54
PRKCH-203ENST00000552875 KLK12Q9UKR0 248 aa5.42□□□□□ -1.54
PRKCH-203ENST00000552875 A0A087WX48 190 aa5.41□□□□□ -1.54
PRKCH-203ENST00000552875 IGHV3-73A0A0B4J1V6 119 aa5.41□□□□□ -1.54
PRKCH-203ENST00000552875 TRBV27A0A0K0K1C4 114 aa5.41□□□□□ -1.54
PRKCH-203ENST00000552875 LINC01546A6NGU7 62 aa5.41□□□□□ -1.54
PRKCH-203ENST00000552875 SMKR1H3BMG3 65 aa5.41□□□□□ -1.54
PRKCH-203ENST00000552875 ESDP10768 282 aa5.41□□□□□ -1.54
PRKCH-203ENST00000552875 SRSF9Q13242 221 aaKnown RBP eCLIP5.41□□□□□ -1.54
PRKCH-203ENST00000552875 NEXN-AS1Q8NBZ9 246 aa5.41□□□□□ -1.54
PRKCH-203ENST00000552875 RPL39LQ96EH5 51 aaKnown RBP5.41□□□□□ -1.54
PRKCH-203ENST00000552875 SMIM2Q9BVW6 85 aa5.41□□□□□ -1.54
PRKCH-203ENST00000552875 MAP1LC3AQ9H492 121 aa5.41□□□□□ -1.54
PRKCH-203ENST00000552875 TRBV7-3A0A075B6L6 115 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 SDHAF1A6NFY7 115 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 TCAPO15273 167 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 CRPP02741 224 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 PMCHP20382 165 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 UBE2D3P61077 147 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 UBE2D2P62837 147 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 RPL36AP83881 106 aaKnown RBP5.4□□□□□ -1.54
PRKCH-203ENST00000552875 Q6ZRP5 223 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 NIT1Q86X76 327 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 Q8N8P6 123 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 RPL36ALQ969Q0 106 aaKnown RBP5.4□□□□□ -1.54
PRKCH-203ENST00000552875 URB1-AS1Q96HZ7 61 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 ST20Q9HBF5 79 aa5.4□□□□□ -1.54
PRKCH-203ENST00000552875 NXT2Q9NPJ8 142 aaKnown RBP5.4□□□□□ -1.54
PRKCH-203ENST00000552875 LINC00310P59036 64 aa5.39□□□□□ -1.55
PRKCH-203ENST00000552875 CHCHD1Q96BP2 118 aaKnown RBP5.39□□□□□ -1.55
PRKCH-203ENST00000552875 CHCHD7Q9BUK0 85 aa5.39□□□□□ -1.55
PRKCH-203ENST00000552875 I3L3M4 83 aa5.38□□□□□ -1.55
PRKCH-203ENST00000552875 VCYO14598 125 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms