RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 PRR26Q8N8Z3 221 aa5.18□□□□□ -1.58
CDK4-213ENST00000552713 LINC00526Q96FQ7 95 aa5.18□□□□□ -1.58
CDK4-213ENST00000552713 AP1S3Q96PC3 154 aa5.18□□□□□ -1.58
CDK4-213ENST00000552713 TMEM243Q9BU79 118 aa5.18□□□□□ -1.58
CDK4-213ENST00000552713 GVQW2A0A096LPI5 108 aaPredicted RBP5.17□□□□□ -1.58
CDK4-213ENST00000552713 XKRY2A2RUG3 117 aa5.17□□□□□ -1.58
CDK4-213ENST00000552713 FAM231BA6NCW3 169 aa5.17□□□□□ -1.58
CDK4-213ENST00000552713 NTF3P20783 257 aa5.17□□□□□ -1.58
CDK4-213ENST00000552713 CACNG7P62955 275 aa5.17□□□□□ -1.58
CDK4-213ENST00000552713 BLOC1S1P78537 153 aa5.17□□□□□ -1.58
CDK4-213ENST00000552713 TWIST1Q15672 202 aa5.17□□□□□ -1.58
CDK4-213ENST00000552713 F2Z2F3 143 aa5.16□□□□□ -1.58
CDK4-213ENST00000552713 FOXA3P55318 350 aaPredicted RBP5.16□□□□□ -1.58
CDK4-213ENST00000552713 CFAP161Q6P656 301 aa5.16□□□□□ -1.58
CDK4-213ENST00000552713 CHCHD10Q8WYQ3 142 aaPredicted RBP5.16□□□□□ -1.58
CDK4-213ENST00000552713 SMIM12Q96EX1 92 aa5.16□□□□□ -1.58
CDK4-213ENST00000552713 EIF5A2Q9GZV4 153 aaKnown RBP5.16□□□□□ -1.58
CDK4-213ENST00000552713 RPP21Q9H633 154 aaKnown RBP5.16□□□□□ -1.58
CDK4-213ENST00000552713 BIN3Q9NQY0 253 aa5.16□□□□□ -1.58
CDK4-213ENST00000552713 TRAV26-2A0A0B4J265 109 aa5.15□□□□□ -1.59
CDK4-213ENST00000552713 A0A1W2PNN7 141 aa5.15□□□□□ -1.59
CDK4-213ENST00000552713 GATCO43716 136 aaKnown RBP5.15□□□□□ -1.59
CDK4-213ENST00000552713 TAGLN2P37802 199 aaKnown RBP5.15□□□□□ -1.59
CDK4-213ENST00000552713 PGLYRP4Q96LB8 373 aa5.15□□□□□ -1.59
CDK4-213ENST00000552713 PSORS1C2Q9UIG4 136 aa5.15□□□□□ -1.59
CDK4-213ENST00000552713 FAT4Q6V0I7 4981 aa5.15□□□□□ -1.59
CDK4-213ENST00000552713 TRGC1P0CF51 173 aa5.14□□□□□ -1.59
CDK4-213ENST00000552713 FOXI1Q12951 378 aa5.14□□□□□ -1.59
CDK4-213ENST00000552713 RASL11AQ6T310 242 aa5.14□□□□□ -1.59
CDK4-213ENST00000552713 A0A0U1RQV1 116 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 TMEM250H0YL14 139 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 UBE2L6O14933 153 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 CTRLP40313 264 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 AMTP48728 403 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 PRR4Q16378 134 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 ZNF664Q8N3J9 261 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 GATD1Q8NB37 220 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 RPL39LQ96EH5 51 aaKnown RBP5.13□□□□□ -1.59
CDK4-213ENST00000552713 CARD19Q96LW7 228 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 SMIM7Q9BQ49 75 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 NIT2Q9NQR4 276 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 LINC00474Q9P2X8 69 aa5.13□□□□□ -1.59
CDK4-213ENST00000552713 ZNF727A8MUV8 499 aa5.12□□□□□ -1.59
CDK4-213ENST00000552713 SRP19P09132 144 aaKnown RBP5.12□□□□□ -1.59
CDK4-213ENST00000552713 PTTG1IPP53801 180 aa5.12□□□□□ -1.59
CDK4-213ENST00000552713 GAGE2BQ13066 116 aa5.12□□□□□ -1.59
CDK4-213ENST00000552713 FAM210AQ96ND0 272 aa5.12□□□□□ -1.59
CDK4-213ENST00000552713 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.11□□□□□ -1.59
CDK4-213ENST00000552713 IGKV2-29A2NJV5 120 aaPredicted RBP5.11□□□□□ -1.59
CDK4-213ENST00000552713 A8MWL6 223 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 C9JQL5 133 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 MT-ND6P03923 174 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 XCL1P47992 114 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 COTL1Q14019 142 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 C1orf137Q5JT78 98 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 PHF5AQ7RTV0 110 aaKnown RBP5.11□□□□□ -1.59
CDK4-213ENST00000552713 SMIM15Q7Z3B0 74 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 LINC01551Q86U37 167 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 KRTAP11-1Q8IUC1 163 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
CDK4-213ENST00000552713 KRTAP1-4P0C5Y4 121 aa5.1□□□□□ -1.59
CDK4-213ENST00000552713 SYCNQ0VAF6 134 aa5.1□□□□□ -1.59
CDK4-213ENST00000552713 C9orf116Q5BN46 136 aaPredicted RBP5.1□□□□□ -1.59
CDK4-213ENST00000552713 FAM231DQ6ZW35 169 aa5.1□□□□□ -1.59
CDK4-213ENST00000552713 BORCS7Q96B45 105 aa5.1□□□□□ -1.59
CDK4-213ENST00000552713 CNFNQ9BYD5 112 aa5.1□□□□□ -1.59
CDK4-213ENST00000552713 IGHV1-58A0A0C4DH39 117 aa5.09□□□□□ -1.59
CDK4-213ENST00000552713 HIGD1CA8MV81 97 aa5.09□□□□□ -1.59
CDK4-213ENST00000552713 CCL25O15444 150 aa5.09□□□□□ -1.59
CDK4-213ENST00000552713 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
CDK4-213ENST00000552713 ADIRFQ15847 76 aa5.09□□□□□ -1.59
CDK4-213ENST00000552713 AMMECR1LQ6DCA0 310 aa5.09□□□□□ -1.59
CDK4-213ENST00000552713 RNASEKQ6P5S7 137 aaKnown RBP5.09□□□□□ -1.59
CDK4-213ENST00000552713 TSKUQ8WUA8 353 aa5.09□□□□□ -1.59
CDK4-213ENST00000552713 LOC107984640A0A0U1RRK4 108 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 LINC00959A0A1B0GUT2 108 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 A0A1B0GUT8 65 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 SDHAF1A6NFY7 115 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 H0Y9J4 135 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 SMKR1H3BMG3 65 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 FGF6P10767 208 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 PMCHP20382 165 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 RPL23P62829 140 aaKnown RBP5.08□□□□□ -1.6
CDK4-213ENST00000552713 TMEM241Q24JQ0 296 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 AMN1Q8IY45 258 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 OSTCQ9NRP0 149 aa5.08□□□□□ -1.6
CDK4-213ENST00000552713 IGLV4-69A0A075B6H9 119 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.07□□□□□ -1.6
CDK4-213ENST00000552713 NCR2O95944 276 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 APCSP02743 223 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 CAMPP49913 170 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 PEA15Q15121 130 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 TEX261Q6UWH6 196 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 NUP35Q8NFH5 326 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 OR5A1Q8NGJ0 315 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 DIRC1Q969H9 104 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 ISOC2Q96AB3 205 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 PKIGQ9Y2B9 76 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 V9GYV3 84 aa5.07□□□□□ -1.6
CDK4-213ENST00000552713 IGLV1-50A0A075B6I6 118 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms