RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 RPL13AP3Q6NVV1 102 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 GTF2H5Q6ZYL4 71 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 VAMP8Q9BV40 100 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 CELSR2Q9HCU4 2923 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 CCDC141Q6ZP82 1450 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 WNK2Q9Y3S1 2297 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 FRAS1Q86XX4 4008 aa0.21□□□□□ -2.38
USP44-207ENST00000552237 SMG6Q86US8 1419 aaKnown RBP0.21□□□□□ -2.38
USP44-207ENST00000552237 PDCD11Q14690 1871 aaKnown RBP0.2□□□□□ -2.38
USP44-207ENST00000552237 BIVM-ERCC5R4GMW8 1640 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 CSPG4Q6UVK1 2322 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 ZNF292O60281 2723 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 TRBV7-3A0A075B6L6 115 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 UBE2L5PA0A1B0GUS4 154 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 LOC105371267A0A1B0GV96 52 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 NAP1L6A6NFF2 107 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 SYS1-DBNDD2H3BUS1 97 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 GNG11P61952 73 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 UBA52P62987 128 aaKnown RBP0.2□□□□□ -2.38
USP44-207ENST00000552237 WFDC2Q14508 124 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 C9orf153Q5TBE3 101 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 Q6JHZ5 121 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 FDCSPQ8NFU4 85 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 TMEM203Q969S6 136 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 SDF2Q99470 211 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 C12orf57Q99622 126 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 PRO1933Q9H354 126 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 TP53AIP1Q9HCN2 124 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 MRC1P22897 1456 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 GOLGA3Q08378 1498 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 KIF21AQ7Z4S6 1674 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 RAPGEF6Q8TEU7 1601 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 TSC2P49815 1807 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 CHD9Q3L8U1 2897 aa0.2□□□□□ -2.38
USP44-207ENST00000552237 HIVEP3Q5T1R4 2406 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 NALCNQ8IZF0 1738 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 POLA1P09884 1462 aaPredicted RBP0.19□□□□□ -2.38
USP44-207ENST00000552237 WDR7Q9Y4E6 1490 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 TRBV6-1A0A0K0K1D8 114 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 SPINK4O60575 86 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 SFT2D2O95562 160 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 COX8AP10176 69 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 GNG4P50150 75 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 COMMD6Q7Z4G1 85 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 C5orf38Q86SI9 138 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 GNG8Q9UK08 70 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 DNAJC13O75165 2243 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 CPSF1Q10570 1443 aaKnown RBP0.19□□□□□ -2.38
USP44-207ENST00000552237 SSC5DA1L4H1 1573 aa0.19□□□□□ -2.38
USP44-207ENST00000552237 MAPKBP1O60336 1514 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 BTAF1O14981 1849 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 FOCADQ5VW36 1801 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 A0A1B0GWA3 101 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 LOC730098B7Z3J9 87 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 CHKB-CPT1BH3BT56 60 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 K7EP13 123 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 HMGN4O00479 90 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 Q5VSD8 79 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 PP6455Q8WZ26 134 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 USMG5Q96IX5 58 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 FXYD6Q9H0Q3 95 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 NXT2Q9NPJ8 142 aaKnown RBP0.18□□□□□ -2.38
USP44-207ENST00000552237 MANBALQ9NQG1 85 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 AP4S1Q9Y587 144 aa0.18□□□□□ -2.38
USP44-207ENST00000552237 WNK1Q9H4A3 2382 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 IGLC7A0M8Q6 106 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 CRYM-AS1A6NIL9 109 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 NDUFA2O43678 99 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 APC2O95996 2303 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 COX6B1P14854 86 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 S100A1P23297 94 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 PPP3R1P63098 170 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 Q8N8P6 123 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 NDUFA4L2Q9NRX3 87 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 SETBP1Q9Y6X0 1596 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 SSPOA2VEC9 5147 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 CUL7Q14999 1698 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 FAM135AQ9P2D6 1515 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 ROCK2O75116 1388 aaKnown RBP0.17□□□□□ -2.38
USP44-207ENST00000552237 ANKRD36A6QL64 1941 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 PIEZO2Q9H5I5 2752 aa0.17□□□□□ -2.38
USP44-207ENST00000552237 COL14A1Q05707 1796 aaKnown RBP0.17□□□□□ -2.38
USP44-207ENST00000552237 MAP1BP46821 2468 aaKnown RBP0.16□□□□□ -2.38
USP44-207ENST00000552237 LRP6O75581 1613 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 MYOM2P54296 1465 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 PHLPP1O60346 1717 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 NRKQ7Z2Y5 1582 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 BICRAQ9NZM4 1560 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 KIF20BQ96Q89 1820 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 TRBV7-4A0A0J9YYF1 115 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 G3V318 75 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 H3BQ15 152 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 NDUFC1O43677 76 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 PITX3O75364 302 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 TMEM263Q8WUH6 116 aaKnown RBP0.16□□□□□ -2.38
USP44-207ENST00000552237 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 PRO1854Q9UHT4 67 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 IER3IP1Q9Y5U9 82 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 LINC01558Q9Y6Z2 57 aa0.16□□□□□ -2.38
USP44-207ENST00000552237 ARL2-SNX15V9GYD0 113 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms