RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 HINT1P49773 126 aaPredicted RBP2.06□□□□□ -2.08
LIMA1-208ENST00000551691 HSPE1P61604 102 aaKnown RBP2.06□□□□□ -2.08
LIMA1-208ENST00000551691 SNRPD3P62318 126 aaKnown RBP2.06□□□□□ -2.08
LIMA1-208ENST00000551691 RHOBP62745 196 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 IBA57Q5T440 356 aaKnown RBP2.06□□□□□ -2.08
LIMA1-208ENST00000551691 AADACL3Q5VUY0 350 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 Q6ZTI0 123 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 C2orf91Q6ZV80 131 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 LHFPL1Q86WI0 220 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 BPIFA4PQ86YQ2 179 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.06□□□□□ -2.08
LIMA1-208ENST00000551691 SMCR5Q8TEV8 140 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 MAFIPQ8WZ33 124 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 GINS3Q9BRX5 216 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 BIN3Q9NQY0 253 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 SAR1AQ9NR31 198 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 SLC39A9Q9NUM3 307 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 SSR3Q9UNL2 185 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 RBM7Q9Y580 266 aaKnown RBP2.06□□□□□ -2.08
LIMA1-208ENST00000551691 A0A0D9SG52 128 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 C11orf86A6NJI1 115 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 BBIP1A8MTZ0 92 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 GNG7O60262 68 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 IFNA7P01567 189 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 TRAPPC2P0DI81 140 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 TRAPPC2BP0DI82 140 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 DEFA3P59666 94 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 CCL20P78556 96 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 RHEBQ15382 184 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 CROCCP2Q86T23 111 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 ZNF664Q8N3J9 261 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 OR5AK2Q8NH90 309 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 GPR146Q96CH1 333 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 DPH3Q96FX2 82 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 HOPXQ9BPY8 73 aaPredicted RBP2.05□□□□□ -2.08
LIMA1-208ENST00000551691 TMEM138Q9NPI0 162 aa2.05□□□□□ -2.08
LIMA1-208ENST00000551691 H3BT86 120 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 J3QRE1 110 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 GNRH2O43555 120 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 COX4I1P13073 169 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 NFYAP23511 347 aaPredicted RBP2.04□□□□□ -2.08
LIMA1-208ENST00000551691 KRTAP13-2Q52LG2 175 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 Q6Q795 121 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 FOXI2Q6ZQN5 318 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 AKAP14Q86UN6 197 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 C2orf50Q96LR7 162 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 IMMP2LQ96T52 175 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 NDUFA4L2Q9NRX3 87 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 NDUFB11Q9NX14 153 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 TAS2R8Q9NYW2 309 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
LIMA1-208ENST00000551691 TRBV6-7A0A0A0MS04 114 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 TRAV5A0A0B4J249 113 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 TMEM14DPA8MWL7 114 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 PITX3O75364 302 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 RNASE2P10153 161 aaKnown RBP2.03□□□□□ -2.08
LIMA1-208ENST00000551691 PPP3R1P63098 170 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 GNG5P63218 68 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 ERHP84090 104 aaKnown RBP2.03□□□□□ -2.08
LIMA1-208ENST00000551691 SCGB2B2Q4G0G5 96 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 SPINK9Q5DT21 86 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 XAF1Q6GPH4 301 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 LYZL1Q6UWQ5 148 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 DPPA3Q6W0C5 159 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 ARPINQ7Z6K5 226 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 OR10J5Q8NHC4 309 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 VSTM2AQ8TAG5 236 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 TVP23CQ96ET8 276 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 SCGB3A1Q96QR1 104 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 DERL1Q9BUN8 251 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 LYRM2Q9NU23 88 aaPredicted RBP2.03□□□□□ -2.08
LIMA1-208ENST00000551691 BET1LQ9NYM9 111 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 CYSLTR1Q9Y271 337 aa2.03□□□□□ -2.08
LIMA1-208ENST00000551691 TRGV2A0A075B6R0 118 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 MUC21A0A0G2JKD1 596 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 TMEM212A6NML5 194 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 C1orf196B1AJZ1 125 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 FNDC10F2Z333 226 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 CYB5BO43169 146 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 RPL28P46779 137 aaKnown RBP2.02□□□□□ -2.09
LIMA1-208ENST00000551691 CRYBA4P53673 196 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 TMEM258P61165 79 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 YPEL3P61236 119 aaPredicted RBP2.02□□□□□ -2.09
LIMA1-208ENST00000551691 INSL4Q14641 139 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 C12orf73Q69YU5 71 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 C10orf126Q8N4M7 172 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 SMIM20Q8N5G0 67 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 DYDC1Q8WWB3 177 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 ARHGAP5-AS1Q96IT6 56 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 IMUPQ9GZP8 106 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 HHLA3Q9XRX5 114 aa2.02□□□□□ -2.09
LIMA1-208ENST00000551691 TRGV1A0A0A0MS02 117 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 A0A1W2PNM2 257 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 A8MTW9 85 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 K7EP13 123 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 GNGT2O14610 69 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 PPBPP02775 128 aa2.01□□□□□ -2.09
LIMA1-208ENST00000551691 EIF5AP63241 154 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms