RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 OR5A1Q8NGJ0 315 aa10.06□□□□□ -0.8
COX6A1-203ENST00000550009 UBR4Q5T4S7 5183 aa10.05□□□□□ -0.8
COX6A1-203ENST00000550009 IGKV2-24A0A0C4DH68 120 aa10.05□□□□□ -0.8
COX6A1-203ENST00000550009 TEX261Q6UWH6 196 aa10.05□□□□□ -0.8
COX6A1-203ENST00000550009 DPH3Q96FX2 82 aa10.05□□□□□ -0.8
COX6A1-203ENST00000550009 BORCS7Q96B45 105 aa10.04□□□□□ -0.8
COX6A1-203ENST00000550009 A0A096LNI7 61 aa10.03□□□□□ -0.8
COX6A1-203ENST00000550009 GVQW2A0A096LPI5 108 aaPredicted RBP10.03□□□□□ -0.8
COX6A1-203ENST00000550009 TRBV27A0A0K0K1C4 114 aa10.03□□□□□ -0.8
COX6A1-203ENST00000550009 H7C423 109 aa10.03□□□□□ -0.8
COX6A1-203ENST00000550009 PHOX2AO14813 284 aa10.03□□□□□ -0.8
COX6A1-203ENST00000550009 MT1HL1P0DM35 61 aa10.03□□□□□ -0.8
COX6A1-203ENST00000550009 ADIRFQ15847 76 aa10.03□□□□□ -0.8
COX6A1-203ENST00000550009 TMEM241Q24JQ0 296 aa10.03□□□□□ -0.8
COX6A1-203ENST00000550009 MRPL51Q4U2R6 128 aaKnown RBP10.03□□□□□ -0.8
COX6A1-203ENST00000550009 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
COX6A1-203ENST00000550009 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.02□□□□□ -0.81
COX6A1-203ENST00000550009 NDUFS6O75380 124 aaKnown RBP10.02□□□□□ -0.81
COX6A1-203ENST00000550009 OXTP01178 125 aa10.02□□□□□ -0.81
COX6A1-203ENST00000550009 MAJINQ3KP22 176 aa10.02□□□□□ -0.81
COX6A1-203ENST00000550009 MRAP2Q96G30 205 aa10.02□□□□□ -0.81
COX6A1-203ENST00000550009 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
COX6A1-203ENST00000550009 RIGQ13278 110 aa10.01□□□□□ -0.81
COX6A1-203ENST00000550009 ODF1Q14990 250 aa10.01□□□□□ -0.81
COX6A1-203ENST00000550009 CFAP161Q6P656 301 aa10.01□□□□□ -0.81
COX6A1-203ENST00000550009 PLAC8Q9NZF1 115 aa10.01□□□□□ -0.81
COX6A1-203ENST00000550009 SMIM27A0A1W2PRY6 76 aa10□□□□□ -0.81
COX6A1-203ENST00000550009 C7orf77A4D0Y5 90 aa10□□□□□ -0.81
COX6A1-203ENST00000550009 CAMPP49913 170 aa10□□□□□ -0.81
COX6A1-203ENST00000550009 MRPL52Q86TS9 123 aaKnown RBP10□□□□□ -0.81
COX6A1-203ENST00000550009 ZNF664Q8N3J9 261 aa10□□□□□ -0.81
COX6A1-203ENST00000550009 FAM104AQ969W3 186 aa10□□□□□ -0.81
COX6A1-203ENST00000550009 TMEM101Q96IK0 257 aa10□□□□□ -0.81
COX6A1-203ENST00000550009 BTF3L4Q96K17 158 aa10□□□□□ -0.81
COX6A1-203ENST00000550009 SUMO2P61956 95 aaKnown RBP9.99□□□□□ -0.81
COX6A1-203ENST00000550009 FAM74A3Q4VXF1 159 aa9.99□□□□□ -0.81
COX6A1-203ENST00000550009 FAM104BQ5XKR9 115 aa9.99□□□□□ -0.81
COX6A1-203ENST00000550009 Q6ZUT4 128 aa9.99□□□□□ -0.81
COX6A1-203ENST00000550009 UBE2D4Q9Y2X8 147 aa9.99□□□□□ -0.81
COX6A1-203ENST00000550009 RPL39P62891 51 aaKnown RBP9.98□□□□□ -0.81
COX6A1-203ENST00000550009 MRPL54Q6P161 138 aaKnown RBP9.98□□□□□ -0.81
COX6A1-203ENST00000550009 STPG4Q8N801 248 aa9.98□□□□□ -0.81
COX6A1-203ENST00000550009 NAT8Q9UHE5 227 aa9.98□□□□□ -0.81
COX6A1-203ENST00000550009 NAT8BQ9UHF3 227 aa9.98□□□□□ -0.81
COX6A1-203ENST00000550009 VCYO14598 125 aa9.97□□□□□ -0.81
COX6A1-203ENST00000550009 OPRPNQ99935 248 aaPredicted RBP9.97□□□□□ -0.81
COX6A1-203ENST00000550009 IGHV1-58A0A0C4DH39 117 aa9.96□□□□□ -0.82
COX6A1-203ENST00000550009 FCER1GP30273 86 aa9.96□□□□□ -0.82
COX6A1-203ENST00000550009 SS18Q15532 418 aa9.96□□□□□ -0.82
COX6A1-203ENST00000550009 CD164L2Q6UWJ8 174 aa9.96□□□□□ -0.82
COX6A1-203ENST00000550009 TRAV13-1A0A0B4J241 112 aa9.95□□□□□ -0.82
COX6A1-203ENST00000550009 NPYP01303 97 aa9.95□□□□□ -0.82
COX6A1-203ENST00000550009 C5orf38Q86SI9 138 aa9.95□□□□□ -0.82
COX6A1-203ENST00000550009 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
COX6A1-203ENST00000550009 IGLV4-69A0A075B6H9 119 aa9.94□□□□□ -0.82
COX6A1-203ENST00000550009 A0A1B0GXF2 115 aa9.94□□□□□ -0.82
COX6A1-203ENST00000550009 D6R8Y8 96 aa9.94□□□□□ -0.82
COX6A1-203ENST00000550009 Q6ZRU5 148 aa9.94□□□□□ -0.82
COX6A1-203ENST00000550009 TCAPO15273 167 aa9.93□□□□□ -0.82
COX6A1-203ENST00000550009 TNFRSF6BO95407 300 aa9.93□□□□□ -0.82
COX6A1-203ENST00000550009 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
COX6A1-203ENST00000550009 PEA15Q15121 130 aa9.93□□□□□ -0.82
COX6A1-203ENST00000550009 A0A0J9YXV3 536 aa9.92□□□□□ -0.82
COX6A1-203ENST00000550009 CKS2P33552 79 aa9.92□□□□□ -0.82
COX6A1-203ENST00000550009 SYCNQ0VAF6 134 aa9.92□□□□□ -0.82
COX6A1-203ENST00000550009 TRBV24-1A0A075B6N3 115 aa9.91□□□□□ -0.82
COX6A1-203ENST00000550009 SERTAD4-AS1Q5TG53 156 aa9.91□□□□□ -0.82
COX6A1-203ENST00000550009 KIR2DL4Q99706 377 aa9.91□□□□□ -0.82
COX6A1-203ENST00000550009 CSDC2Q9Y534 153 aaKnown RBP9.91□□□□□ -0.82
COX6A1-203ENST00000550009 A0A1W2PNN7 141 aa9.9□□□□□ -0.82
COX6A1-203ENST00000550009 ZNF561-AS1K7EIQ3 104 aa9.9□□□□□ -0.82
COX6A1-203ENST00000550009 COX7A2LO14548 114 aa9.9□□□□□ -0.82
COX6A1-203ENST00000550009 GAGE2BQ13066 116 aa9.9□□□□□ -0.82
COX6A1-203ENST00000550009 C7orf33Q8WU49 177 aa9.9□□□□□ -0.82
COX6A1-203ENST00000550009 SMIM2Q9BVW6 85 aa9.9□□□□□ -0.82
COX6A1-203ENST00000550009 PLA2G2DQ9UNK4 145 aa9.9□□□□□ -0.82
COX6A1-203ENST00000550009 C1orf196B1AJZ1 125 aa9.89□□□□□ -0.83
COX6A1-203ENST00000550009 PPP1R2P9O14990 202 aa9.89□□□□□ -0.83
COX6A1-203ENST00000550009 PTTG1IPP53801 180 aa9.89□□□□□ -0.83
COX6A1-203ENST00000550009 HBBP68871 147 aa9.89□□□□□ -0.83
COX6A1-203ENST00000550009 LRP2P98164 4655 aa9.88□□□□□ -0.83
COX6A1-203ENST00000550009 MALP21145 153 aa9.88□□□□□ -0.83
COX6A1-203ENST00000550009 C20orf78Q9BR46 151 aa9.88□□□□□ -0.83
COX6A1-203ENST00000550009 LINC00862A6NCI5 91 aa9.87□□□□□ -0.83
COX6A1-203ENST00000550009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.87□□□□□ -0.83
COX6A1-203ENST00000550009 PPP1R17O96001 155 aa9.87□□□□□ -0.83
COX6A1-203ENST00000550009 RPL32P62910 135 aaKnown RBP9.87□□□□□ -0.83
COX6A1-203ENST00000550009 ZC2HC1BQ5TFG8 222 aa9.87□□□□□ -0.83
COX6A1-203ENST00000550009 TIMM21Q9BVV7 248 aa9.87□□□□□ -0.83
COX6A1-203ENST00000550009 C10orf25Q5T742 122 aa9.86□□□□□ -0.83
COX6A1-203ENST00000550009 CAMK2N2Q96S95 79 aa9.86□□□□□ -0.83
COX6A1-203ENST00000550009 A0A1B0GW15 77 aa9.85□□□□□ -0.83
COX6A1-203ENST00000550009 SPAG11BQ08648 103 aa9.85□□□□□ -0.83
COX6A1-203ENST00000550009 IGHV3OR16-9A0A0B4J2B5 98 aa9.84□□□□□ -0.83
COX6A1-203ENST00000550009 LOC107984640A0A0U1RRK4 108 aa9.84□□□□□ -0.83
COX6A1-203ENST00000550009 LOC389332A0A1B0GUA5 103 aa9.84□□□□□ -0.83
COX6A1-203ENST00000550009 SMDT1Q9H4I9 107 aa9.84□□□□□ -0.83
COX6A1-203ENST00000550009 F8W036 122 aa9.83□□□□□ -0.84
COX6A1-203ENST00000550009 RPL18AQ02543 176 aaKnown RBP9.83□□□□□ -0.84
COX6A1-203ENST00000550009 TMEM136Q6ZRR5 245 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms