RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 CEMP1Q6PRD7 247 aaPredicted RBP5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 ERASQ7Z444 233 aa5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 SCGB3A1Q96QR1 104 aa5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 TIMM17AQ99595 171 aa5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 OPRPNQ99935 248 aaPredicted RBP5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 TMEM243Q9BU79 118 aa5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 UBE2D4Q9Y2X8 147 aa5.57□□□□□ -1.52
DEPDC4-207ENST00000549249 IGLV4-3A0A075B6K6 122 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 LINC01549A6NIU2 74 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 H0Y8G0 127 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 SYS1-DBNDD2H3BUS1 97 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 G0S2P27469 103 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 JOSD1Q15040 202 aaPredicted RBP5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 LYPD5Q6UWN5 251 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 Q6ZUT4 128 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 SH2D6Q7Z4S9 175 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 BAALCQ8WXS3 180 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 PYGO1Q9Y3Y4 419 aa5.56□□□□□ -1.52
DEPDC4-207ENST00000549249 STAB2Q8WWQ8 2551 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 FGF6P10767 208 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 TIRAPP58753 221 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 GAGE6Q13070 117 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 RNASE13Q5GAN3 156 aaKnown RBP5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 LELP1Q5T871 98 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 LINC01545Q5VT33 79 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 MRPL52Q86TS9 123 aaKnown RBP5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 C15orf53Q8NAA6 179 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 MUC7Q8TAX7 377 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 TMEM141Q96I45 108 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 PMCHL2Q9BQD1 86 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 TIMM21Q9BVV7 248 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 MAP1LC3CQ9BXW4 147 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 SPANXA1Q9NS26 97 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 DNAH7Q8WXX0 4024 aa5.55□□□□□ -1.52
DEPDC4-207ENST00000549249 IGLV4-60A0A075B6I1 120 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 IGLL5B9A064 214 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 H7C423 109 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 ODF1Q14990 250 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 ESRGQ1W209 222 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 LGALS9CQ6DKI2 356 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 Q6ZN92 141 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 AMELXQ99217 191 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 CHCHD5Q9BSY4 110 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
DEPDC4-207ENST00000549249 A0A087WX48 190 aa5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 TRAV12-1A0A0B4J245 112 aa5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 PRSS29PA6NIE9 313 aa5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 UBE2L6O14933 153 aa5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 PRSS1P07477 247 aa5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 NPSP0C0P6 89 aa5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 SMIM6P0DI80 62 aa5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 MRPS36P82909 103 aaKnown RBP5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 MPV17L2Q567V2 206 aa5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 CSDC2Q9Y534 153 aaKnown RBP5.53□□□□□ -1.52
DEPDC4-207ENST00000549249 RYR3Q15413 4870 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 IGLV4-69A0A075B6H9 119 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 SCGB1D1O95968 90 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 ZNF25P17030 456 aaPredicted RBP5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 RBX1P62877 108 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 PMVKQ15126 192 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 CASC10Q5T4H9 136 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 WFDC10BQ8IUB3 73 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 ATOH7Q8N100 152 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 CST9LQ9H4G1 147 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 CDC42SE2Q9NRR3 84 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 MRPL35Q9NZE8 188 aaKnown RBP5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 APLNQ9ULZ1 77 aa5.52□□□□□ -1.53
DEPDC4-207ENST00000549249 A0A1B0GUV1 79 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 C20orf202A1L168 122 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 NUPR2A6NF83 97 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 F8VRH5 84 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 AMMECR1LQ6DCA0 310 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 TEX43Q6ZNM6 134 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 LINC00518Q8N0U6 118 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 ZNF664Q8N3J9 261 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 OR5A1Q8NGJ0 315 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 CHTOPQ9Y3Y2 248 aaKnown RBP5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 LINC00588Q9Y4M8 146 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 DYNC2H1Q8NCM8 4307 aaKnown RBP5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 STARD9Q9P2P6 4700 aa5.51□□□□□ -1.53
DEPDC4-207ENST00000549249 C11orf86A6NJI1 115 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 TMEM262E9PQX1 116 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 SMAGPQ0VAQ4 97 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 MAJINQ3KP22 176 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 PAPPA-AS1Q5QFB9 102 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 DGAT2L7PQ6IED9 249 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 TMEM101Q96IK0 257 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 C12orf57Q99622 126 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 CDIP1Q9H305 208 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 VCX2Q9H322 139 aa5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 MRPS16Q9Y3D3 137 aaKnown RBP5.5□□□□□ -1.53
DEPDC4-207ENST00000549249 TRAV8-6A0A0B4J262 113 aa5.49□□□□□ -1.53
DEPDC4-207ENST00000549249 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
DEPDC4-207ENST00000549249 hDV102S1A0JD36 115 aa5.49□□□□□ -1.53
DEPDC4-207ENST00000549249 IGLC3P0DOY3 106 aa5.49□□□□□ -1.53
DEPDC4-207ENST00000549249 UBE2D1P51668 147 aa5.49□□□□□ -1.53
DEPDC4-207ENST00000549249 ZFAND6Q6FIF0 208 aa5.49□□□□□ -1.53
DEPDC4-207ENST00000549249 TRAV13-1A0A0B4J241 112 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms