RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 Q6ZR54 194 aa3.38□□□□□ -1.87
APP-217ENST00000548570 DAZ4Q86SG3 579 aaKnown RBP3.38□□□□□ -1.87
APP-217ENST00000548570 NIT1Q86X76 327 aa3.38□□□□□ -1.87
APP-217ENST00000548570 C18orf32Q8TCD1 76 aa3.38□□□□□ -1.87
APP-217ENST00000548570 Q9H8V8 135 aa3.38□□□□□ -1.87
APP-217ENST00000548570 DAZ3Q9NR90 486 aaKnown RBP3.38□□□□□ -1.87
APP-217ENST00000548570 EPPK1P58107 5090 aaKnown RBP3.38□□□□□ -1.87
APP-217ENST00000548570 IGLV4-60A0A075B6I1 120 aa3.37□□□□□ -1.87
APP-217ENST00000548570 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.37□□□□□ -1.87
APP-217ENST00000548570 IGKV2-29A2NJV5 120 aaPredicted RBP3.37□□□□□ -1.87
APP-217ENST00000548570 VCYO14598 125 aa3.37□□□□□ -1.87
APP-217ENST00000548570 CCL18P55774 89 aa3.37□□□□□ -1.87
APP-217ENST00000548570 GAGE6Q13070 117 aa3.37□□□□□ -1.87
APP-217ENST00000548570 MPV17L2Q567V2 206 aa3.37□□□□□ -1.87
APP-217ENST00000548570 SH2D6Q7Z4S9 175 aa3.37□□□□□ -1.87
APP-217ENST00000548570 Q8N8P6 123 aa3.37□□□□□ -1.87
APP-217ENST00000548570 Q8N976 141 aa3.37□□□□□ -1.87
APP-217ENST00000548570 C20orf203Q8NBC4 194 aa3.37□□□□□ -1.87
APP-217ENST00000548570 LAMTOR2Q9Y2Q5 125 aa3.37□□□□□ -1.87
APP-217ENST00000548570 FRAS1Q86XX4 4008 aa3.36□□□□□ -1.87
APP-217ENST00000548570 NACAE9PAV3 2078 aa3.36□□□□□ -1.87
APP-217ENST00000548570 IGHV1-24A0A0C4DH33 117 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST1H2BKO60814 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 LY6G6CO95867 125 aa3.36□□□□□ -1.87
APP-217ENST00000548570 PPP1R17O96001 155 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST1H2BJP06899 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 PMCHP20382 165 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST1H2BOP23527 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST1H2BBP33778 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST1H2BDP58876 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST1H2BCP62807 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 RBX1P62877 108 aa3.36□□□□□ -1.87
APP-217ENST00000548570 RPL39P62891 51 aaKnown RBP3.36□□□□□ -1.87
APP-217ENST00000548570 Q0VG73 95 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST2H2BEQ16778 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 LINC01556Q5JQF7 62 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.36□□□□□ -1.87
APP-217ENST00000548570 ENHOQ6UWT2 76 aa3.36□□□□□ -1.87
APP-217ENST00000548570 Q6ZRN7 208 aaPredicted RBP3.36□□□□□ -1.87
APP-217ENST00000548570 HIST1H2BHQ93079 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST1H2BNQ99877 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 HIST1H2BMQ99879 126 aa3.36□□□□□ -1.87
APP-217ENST00000548570 OPRPNQ99935 248 aaPredicted RBP3.36□□□□□ -1.87
APP-217ENST00000548570 NBDYA0A0U1RRE5 68 aa3.35□□□□□ -1.87
APP-217ENST00000548570 IGIPA6NJ69 53 aa3.35□□□□□ -1.87
APP-217ENST00000548570 M0R2N4 97 aa3.35□□□□□ -1.87
APP-217ENST00000548570 SIVA1O15304 175 aa3.35□□□□□ -1.87
APP-217ENST00000548570 IGHV3-30P01768 117 aa3.35□□□□□ -1.87
APP-217ENST00000548570 IGHV3-33P01772 117 aa3.35□□□□□ -1.87
APP-217ENST00000548570 SLPIP03973 132 aa3.35□□□□□ -1.87
APP-217ENST00000548570 IGHV3-30-3P0DP02 117 aa3.35□□□□□ -1.87
APP-217ENST00000548570 IGHV3-30-5P0DP03 117 aa3.35□□□□□ -1.87
APP-217ENST00000548570 FGF6P10767 208 aa3.35□□□□□ -1.87
APP-217ENST00000548570 GCSHP23434 173 aa3.35□□□□□ -1.87
APP-217ENST00000548570 AMTP48728 403 aa3.35□□□□□ -1.87
APP-217ENST00000548570 SNRPEP62304 92 aaKnown RBP3.35□□□□□ -1.87
APP-217ENST00000548570 PMCHL1Q16048 86 aa3.35□□□□□ -1.87
APP-217ENST00000548570 KRTAP26-1Q6PEX3 210 aa3.35□□□□□ -1.87
APP-217ENST00000548570 MRPL52Q86TS9 123 aaKnown RBP3.35□□□□□ -1.87
APP-217ENST00000548570 MAPKAPK5-AS1Q8N8E1 139 aa3.35□□□□□ -1.87
APP-217ENST00000548570 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.35□□□□□ -1.87
APP-217ENST00000548570 CHCHD5Q9BSY4 110 aa3.35□□□□□ -1.87
APP-217ENST00000548570 TMEM243Q9BU79 118 aa3.35□□□□□ -1.87
APP-217ENST00000548570 MAP1LC3AQ9H492 121 aa3.35□□□□□ -1.87
APP-217ENST00000548570 PRR34Q9NV39 138 aa3.35□□□□□ -1.87
APP-217ENST00000548570 UBE2D4Q9Y2X8 147 aa3.35□□□□□ -1.87
APP-217ENST00000548570 PKD1P98161 4303 aa3.35□□□□□ -1.87
APP-217ENST00000548570 DYNC1H1Q14204 4646 aaKnown RBP3.35□□□□□ -1.87
APP-217ENST00000548570 TRBV25-1A0A075B6N4 114 aa3.34□□□□□ -1.87
APP-217ENST00000548570 TRAV8-6A0A0B4J262 113 aa3.34□□□□□ -1.87
APP-217ENST00000548570 A0A0U1RRA0 63 aa3.34□□□□□ -1.87
APP-217ENST00000548570 A0A1B0GUV1 79 aa3.34□□□□□ -1.87
APP-217ENST00000548570 IBA57-AS1B1ANH7 110 aa3.34□□□□□ -1.87
APP-217ENST00000548570 RTL8CO15255 209 aa3.34□□□□□ -1.87
APP-217ENST00000548570 SERF1AO75920 110 aa3.34□□□□□ -1.87
APP-217ENST00000548570 PLA2G1BP04054 148 aaKnown RBP3.34□□□□□ -1.87
APP-217ENST00000548570 LINC00614P0C842 121 aa3.34□□□□□ -1.87
APP-217ENST00000548570 LAGE3Q14657 143 aa3.34□□□□□ -1.87
APP-217ENST00000548570 RNF151Q2KHN1 245 aa3.34□□□□□ -1.87
APP-217ENST00000548570 TMEM97Q5BJF2 176 aa3.34□□□□□ -1.87
APP-217ENST00000548570 PDZD11Q5EBL8 140 aa3.34□□□□□ -1.87
APP-217ENST00000548570 ZC2HC1BQ5TFG8 222 aa3.34□□□□□ -1.87
APP-217ENST00000548570 LINC00173Q6ZV60 143 aa3.34□□□□□ -1.87
APP-217ENST00000548570 UBE2DNLQ8IWF7 75 aa3.34□□□□□ -1.87
APP-217ENST00000548570 KIR2DL4Q99706 377 aa3.34□□□□□ -1.87
APP-217ENST00000548570 GEMIN7Q9H840 131 aaKnown RBP3.34□□□□□ -1.87
APP-217ENST00000548570 NXT2Q9NPJ8 142 aaKnown RBP3.34□□□□□ -1.87
APP-217ENST00000548570 DNAH5Q8TE73 4624 aa3.34□□□□□ -1.88
APP-217ENST00000548570 IGLV4-3A0A075B6K6 122 aa3.33□□□□□ -1.88
APP-217ENST00000548570 H7C423 109 aa3.33□□□□□ -1.88
APP-217ENST00000548570 LBHQ53QV2 105 aaPredicted RBP3.33□□□□□ -1.88
APP-217ENST00000548570 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
APP-217ENST00000548570 COA6Q5JTJ3 125 aaKnown RBP3.33□□□□□ -1.88
APP-217ENST00000548570 C2orf66Q6UXQ4 117 aa3.33□□□□□ -1.88
APP-217ENST00000548570 Q6ZUT4 128 aa3.33□□□□□ -1.88
APP-217ENST00000548570 ERASQ7Z444 233 aa3.33□□□□□ -1.88
APP-217ENST00000548570 LINC00269Q8N2A0 174 aa3.33□□□□□ -1.88
APP-217ENST00000548570 FAM19A2Q8N3H0 131 aa3.33□□□□□ -1.88
APP-217ENST00000548570 PRSS3P2Q8NHM4 247 aa3.33□□□□□ -1.88
APP-217ENST00000548570 TOMM6Q96B49 74 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms