RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 C1QBP02746 253 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 CD3DP04234 171 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 IL5P05113 134 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 CRYGDP07320 174 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 ATP6V0CP27449 155 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 FUSP35637 526 aaKnown RBP eCLIP1.9□□□□□ -2.11
PTCH1-216ENST00000548379 RPL19P84098 196 aaKnown RBP1.9□□□□□ -2.11
PTCH1-216ENST00000548379 SMCO1Q147U7 214 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 NEDD8Q15843 81 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 TDRG1Q3Y452 100 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 LCN15Q6UWW0 184 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 LYZL2Q7Z4W2 148 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 OR13C8Q8NGS7 320 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 LINC00467Q9BRT7 94 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 NKX6-2Q9C056 277 aaPredicted RBP1.9□□□□□ -2.11
PTCH1-216ENST00000548379 NAA60Q9H7X0 242 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 PRO0255Q9UI72 69 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 HHLA3Q9XRX5 114 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 FUT9Q9Y231 359 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 HIGD1AQ9Y241 93 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 IGKV1D-37A0A075B6S9 117 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 TRAV12-3A0A0B4J271 114 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 DUXBA0A1W2PPF3 345 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 C9JCJ5 164 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 H3BRN7 92 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 COX7A2LO14548 114 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 SLC25A20O43772 301 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 SLC25A5P05141 298 aaKnown RBP1.89□□□□□ -2.11
PTCH1-216ENST00000548379 IGHV3-30-3P0DP02 117 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 IAPPP10997 89 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 TAS2R45P59539 299 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 LSM3P62310 102 aaKnown RBP1.89□□□□□ -2.11
PTCH1-216ENST00000548379 POLR2GP62487 172 aaKnown RBP eCLIP1.89□□□□□ -2.11
PTCH1-216ENST00000548379 HAMPP81172 84 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 MRPS10P82664 201 aaKnown RBP1.89□□□□□ -2.11
PTCH1-216ENST00000548379 SSBP1Q04837 148 aaKnown RBP1.89□□□□□ -2.11
PTCH1-216ENST00000548379 IAH1Q2TAA2 248 aaPredicted RBP1.89□□□□□ -2.11
PTCH1-216ENST00000548379 MRPL51Q4U2R6 128 aaKnown RBP1.89□□□□□ -2.11
PTCH1-216ENST00000548379 SPANXN5Q5MJ07 72 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 LYPD5Q6UWN5 251 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
PTCH1-216ENST00000548379 SCXQ7RTU7 201 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 LHFPL1Q86WI0 220 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 BPIFA4PQ86YQ2 179 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 Q8N814 137 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 TMEM229BQ8NBD8 167 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 RAB2BQ8WUD1 216 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 TXNDC17Q9BRA2 123 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 SH3BGRL3Q9H299 93 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 SCP2D1Q9UJQ7 156 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 FAT2Q9NYQ8 4349 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 DNAH11Q96DT5 4516 aa1.89□□□□□ -2.11
PTCH1-216ENST00000548379 DNAH2Q9P225 4427 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 FAM236DA0A1B0GTK5 79 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 A0A1B0GU33 70 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 C7orf71A4D174 169 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 GGTLC3B5MD39 225 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 LST1O00453 97 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 SYNGR2O43760 224 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 PDE6DO43924 150 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 GPX1P07203 203 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 AKAIN1P0CW23 69 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 FAM236CP0DP71 79 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 FAUP35544 74 aaKnown RBP1.88□□□□□ -2.11
PTCH1-216ENST00000548379 CRYBA4P53673 196 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 TSPEAR-AS2P59090 65 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 MEF2BQ02080 365 aaPredicted RBP1.88□□□□□ -2.11
PTCH1-216ENST00000548379 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 IBA57Q5T440 356 aaKnown RBP1.88□□□□□ -2.11
PTCH1-216ENST00000548379 CYP2G1PQ6ZSU1 146 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 Q6ZTI0 123 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 WFDC10BQ8IUB3 73 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 CLVS1Q8IUQ0 354 aaPredicted RBP1.88□□□□□ -2.11
PTCH1-216ENST00000548379 C12orf45Q8N5I9 185 aaPredicted RBP1.88□□□□□ -2.11
PTCH1-216ENST00000548379 EIF4E3Q8N5X7 224 aaKnown RBP1.88□□□□□ -2.11
PTCH1-216ENST00000548379 MCFD2Q8NI22 146 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 ODF3Q96PU9 254 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 MRPL32Q9BYC8 188 aaKnown RBP1.88□□□□□ -2.11
PTCH1-216ENST00000548379 DPH3P1Q9H4G8 78 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 C11orf1Q9H5F2 150 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 SLC39A9Q9NUM3 307 aa1.88□□□□□ -2.11
PTCH1-216ENST00000548379 DSCAML1Q8TD84 2053 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 SORL1Q92673 2214 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 TRAV26-2A0A0B4J265 109 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 A8MUN3 132 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 SLC17A3O00476 420 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 SPINK4O60575 86 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 SLC25A6P12236 298 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 RNASE4P34096 147 aaKnown RBP1.87□□□□□ -2.11
PTCH1-216ENST00000548379 RAB14P61106 215 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 TMEM78Q5T7P6 136 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 LINC00305Q7Z4B0 112 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 ANKRD29Q8N6D5 301 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 OR10P1Q8NGE3 313 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 CMTM2Q8TAZ6 248 aa1.87□□□□□ -2.11
PTCH1-216ENST00000548379 ZNF431Q8TF32 576 aaPredicted RBP1.87□□□□□ -2.11
PTCH1-216ENST00000548379 PRADC1Q9BSG0 188 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms