RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 BCE1O60756 84 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 SPINK1P00995 79 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 NBEAP1P0C6P0 100 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 S100A4P26447 101 aaKnown RBP1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 PRSS3P35030 304 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 CSN1S1P47710 185 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 ZNF80P51504 273 aaPredicted RBP1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 MLLT11Q13015 90 aaPredicted RBP1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 DNAL1Q4LDG9 190 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 SPANXN5Q5MJ07 72 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 C22orf42Q6IC83 251 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 FAM19A2Q8N3H0 131 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 C12orf45Q8N5I9 185 aaPredicted RBP1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 OR2D3Q8NGH3 330 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 OR5A1Q8NGJ0 315 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 OR1L4Q8NGR5 311 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 TERB2Q8NHR7 220 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 ZCCHC13Q8WW36 166 aaKnown RBP1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 SFRP2Q96HF1 295 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 SPRR2FQ96RM1 72 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 CAMK2N2Q96S95 79 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 MGST2Q99735 147 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 TMEM243Q9BU79 118 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 SLIRPQ9GZT3 109 aaKnown RBP1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 FAM107BQ9H098 131 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 MED28Q9H204 178 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 TREM1Q9NP99 234 aa1.04□□□□□ -2.24
DEPDC4-204ENST00000547823 A0A0B4J2A0 478 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 H3BVH4 76 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 K7EQM0 130 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 SYNGR2O43760 224 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 ESDP10768 282 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 XCL1P47992 114 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 RAB4BP61018 213 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 MIC13Q5XKP0 118 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 LYZL2Q7Z4W2 148 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 OR5C1Q8NGR4 320 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 DYNC2LI1Q8TCX1 351 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 PYDC1Q8WXC3 89 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 S100A16Q96FQ6 103 aaKnown RBP1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 FAM167A-AS1Q96KT0 104 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 IMMP2LQ96T52 175 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 PFDN5Q99471 154 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 C9orf16Q9BUW7 83 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 SLC25A2Q9BXI2 301 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 IL36BQ9NZH7 164 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 OR5AC2Q9NZP5 309 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 CCDC59Q9P031 241 aaKnown RBP1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 RABL2AQ9UBK7 228 aaPredicted RBP1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 SHPKQ9UHJ6 478 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 RABL2BQ9UNT1 228 aa1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 C14orf166Q9Y224 244 aaKnown RBP1.03□□□□□ -2.24
DEPDC4-204ENST00000547823 MUC5ACP98088 5654 aa1.03□□□□□ -2.25
DEPDC4-204ENST00000547823 TMEM223A0PJW6 202 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 C20orf202A1L168 122 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 C9orf92A6NGG3 77 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 A6NN06 94 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 A8MUU9 505 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 M0R036 132 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 M0R381 172 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 UBE2L6O14933 153 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 CCL25O15444 150 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 SLC25A20O43772 301 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 GCGP01275 180 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 CD3DP04234 171 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 ARMS2P0C7Q2 107 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 METTL15P1P0C7V9 234 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 SLC25A6P12236 298 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 FGF7P21781 194 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 GABARAPL2P60520 117 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 RPS29P62273 56 aaKnown RBP1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 RANP62826 216 aaKnown RBP1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 MXD1Q05195 221 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 ZNF56Q15929 161 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 SCGB2B2Q4G0G5 96 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 RNASE10Q5GAN6 216 aaKnown RBP1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 UBE2NLQ5JXB2 153 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 TMEM14EPQ6UXP3 125 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 GOLT1AQ6ZVE7 132 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 PRNTQ86SH4 94 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 FXYD5Q96DB9 178 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 HYLS1Q96M11 299 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 NMES1Q9C002 83 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 SMDT1Q9H4I9 107 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 C11orf1Q9H5F2 150 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 LYRM2Q9NU23 88 aaPredicted RBP1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 UQCC1Q9NVA1 299 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 NDUFB11Q9NX14 153 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 PSENENQ9NZ42 101 aa1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 MRPL35Q9NZE8 188 aaKnown RBP1.02□□□□□ -2.25
DEPDC4-204ENST00000547823 LINC00959A0A1B0GUT2 108 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 GRIFINA4D1Z8 144 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 G3V3Q6 166 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 COX7A2LO14548 114 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 IGKV4-1P06312 121 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 GNAO1P09471 354 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 TPT1P13693 172 aaKnown RBP1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 SDC2P34741 201 aa1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 RPS20P60866 119 aaKnown RBP1.01□□□□□ -2.25
DEPDC4-204ENST00000547823 RPL37P61927 97 aaKnown RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms