RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 XGP55808 180 aa15.74■□□□□ 0.11
RBFOX1-209ENST00000547427 GAGE12HA6NDE8 117 aa15.73■□□□□ 0.11
RBFOX1-209ENST00000547427 PRSS1P07477 247 aa15.73■□□□□ 0.11
RBFOX1-209ENST00000547427 LINC01620Q4KN68 170 aa15.73■□□□□ 0.11
RBFOX1-209ENST00000547427 ZNF664Q8N3J9 261 aa15.72■□□□□ 0.11
RBFOX1-209ENST00000547427 CLRN3Q8NCR9 226 aa15.72■□□□□ 0.11
RBFOX1-209ENST00000547427 CHCHD10Q8WYQ3 142 aaPredicted RBP15.72■□□□□ 0.11
RBFOX1-209ENST00000547427 S100PP25815 95 aa15.71■□□□□ 0.11
RBFOX1-209ENST00000547427 Q8N1X5 172 aa15.71■□□□□ 0.11
RBFOX1-209ENST00000547427 CDC42SE2Q9NRR3 84 aa15.71■□□□□ 0.11
RBFOX1-209ENST00000547427 HSPG2P98160 4391 aa15.71■□□□□ 0.1
RBFOX1-209ENST00000547427 APOBP04114 4563 aaKnown RBP15.7■□□□□ 0.1
RBFOX1-209ENST00000547427 hDV102S1A0JD36 115 aa15.69■□□□□ 0.1
RBFOX1-209ENST00000547427 RAB5AP20339 215 aa15.69■□□□□ 0.1
RBFOX1-209ENST00000547427 LAMTOR2Q9Y2Q5 125 aa15.69■□□□□ 0.1
RBFOX1-209ENST00000547427 UBE2D4Q9Y2X8 147 aa15.69■□□□□ 0.1
RBFOX1-209ENST00000547427 TRAV9-1A0A075B6T8 112 aa15.68■□□□□ 0.1
RBFOX1-209ENST00000547427 LINC00959A0A1B0GUT2 108 aa15.68■□□□□ 0.1
RBFOX1-209ENST00000547427 HAMPP81172 84 aa15.68■□□□□ 0.1
RBFOX1-209ENST00000547427 SS18Q15532 418 aa15.68■□□□□ 0.1
RBFOX1-209ENST00000547427 C10orf91Q5T1B1 145 aa15.68■□□□□ 0.1
RBFOX1-209ENST00000547427 FAM30AQ9NZY2 134 aa15.68■□□□□ 0.1
RBFOX1-209ENST00000547427 CSDC2Q9Y534 153 aaKnown RBP15.68■□□□□ 0.1
RBFOX1-209ENST00000547427 XCL1P47992 114 aa15.67■□□□□ 0.1
RBFOX1-209ENST00000547427 CFAP161Q6P656 301 aa15.67■□□□□ 0.1
RBFOX1-209ENST00000547427 MAP1LC3AQ9H492 121 aa15.67■□□□□ 0.1
RBFOX1-209ENST00000547427 AP5S1Q9NUS5 200 aa15.67■□□□□ 0.1
RBFOX1-209ENST00000547427 CARHSP1Q9Y2V2 147 aaKnown RBP15.67■□□□□ 0.1
RBFOX1-209ENST00000547427 LOC389332A0A1B0GUA5 103 aa15.66■□□□□ 0.1
RBFOX1-209ENST00000547427 CCL25O15444 150 aa15.66■□□□□ 0.1
RBFOX1-209ENST00000547427 TIMM21Q9BVV7 248 aa15.66■□□□□ 0.1
RBFOX1-209ENST00000547427 KRTAP17-1Q9BYP8 105 aa15.66■□□□□ 0.1
RBFOX1-209ENST00000547427 RPS10P5Q9NQ39 176 aa15.66■□□□□ 0.1
RBFOX1-209ENST00000547427 RPL39P62891 51 aaKnown RBP15.65■□□□□ 0.1
RBFOX1-209ENST00000547427 RHEBQ15382 184 aa15.65■□□□□ 0.1
RBFOX1-209ENST00000547427 RNASE13Q5GAN3 156 aaKnown RBP15.64■□□□□ 0.09
RBFOX1-209ENST00000547427 KRTAP4-5Q9BYR2 181 aa15.64■□□□□ 0.09
RBFOX1-209ENST00000547427 PRSS47A8MTI9 375 aa15.62■□□□□ 0.09
RBFOX1-209ENST00000547427 SMR3BP02814 79 aaPredicted RBP15.62■□□□□ 0.09
RBFOX1-209ENST00000547427 FOXI1Q12951 378 aa15.62■□□□□ 0.09
RBFOX1-209ENST00000547427 Q6ZSA8 131 aa15.62■□□□□ 0.09
RBFOX1-209ENST00000547427 Q6ZUT4 128 aa15.62■□□□□ 0.09
RBFOX1-209ENST00000547427 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.61■□□□□ 0.09
RBFOX1-209ENST00000547427 EPM2AB3EWF7 344 aa15.61■□□□□ 0.09
RBFOX1-209ENST00000547427 NDUFA5Q16718 116 aa15.61■□□□□ 0.09
RBFOX1-209ENST00000547427 C15orf56Q8N910 161 aa15.61■□□□□ 0.09
RBFOX1-209ENST00000547427 SPANXA1Q9NS26 97 aa15.61■□□□□ 0.09
RBFOX1-209ENST00000547427 TRAV13-1A0A0B4J241 112 aa15.6■□□□□ 0.09
RBFOX1-209ENST00000547427 C1orf196B1AJZ1 125 aa15.6■□□□□ 0.09
RBFOX1-209ENST00000547427 APOC3P02656 99 aa15.6■□□□□ 0.09
RBFOX1-209ENST00000547427 C9orf163Q8N9P6 203 aa15.6■□□□□ 0.09
RBFOX1-209ENST00000547427 CNBPP62633 177 aaKnown RBP15.59■□□□□ 0.09
RBFOX1-209ENST00000547427 KIAA1644Q3SXP7 199 aa15.59■□□□□ 0.09
RBFOX1-209ENST00000547427 HIGD2BQ4VC39 106 aa15.59■□□□□ 0.09
RBFOX1-209ENST00000547427 CD164L2Q6UWJ8 174 aa15.59■□□□□ 0.09
RBFOX1-209ENST00000547427 Q8N8P6 123 aa15.59■□□□□ 0.09
RBFOX1-209ENST00000547427 IFI27P40305 119 aaPredicted RBP15.57■□□□□ 0.08
RBFOX1-209ENST00000547427 COX19Q49B96 90 aa15.57■□□□□ 0.08
RBFOX1-209ENST00000547427 GNB1LQ9BYB4 327 aa15.57■□□□□ 0.08
RBFOX1-209ENST00000547427 OPRPNQ99935 248 aaPredicted RBP15.56■□□□□ 0.08
RBFOX1-209ENST00000547427 NXT2Q9NPJ8 142 aaKnown RBP15.56■□□□□ 0.08
RBFOX1-209ENST00000547427 FAM229AH3BQW9 127 aa15.55■□□□□ 0.08
RBFOX1-209ENST00000547427 SNAPINO95295 136 aa15.55■□□□□ 0.08
RBFOX1-209ENST00000547427 MRPS36P82909 103 aaKnown RBP15.55■□□□□ 0.08
RBFOX1-209ENST00000547427 ORMDL2Q53FV1 153 aa15.55■□□□□ 0.08
RBFOX1-209ENST00000547427 Q5VSD8 79 aa15.55■□□□□ 0.08
RBFOX1-209ENST00000547427 IGHV1-58A0A0C4DH39 117 aa15.54■□□□□ 0.08
RBFOX1-209ENST00000547427 MALP21145 153 aa15.54■□□□□ 0.08
RBFOX1-209ENST00000547427 SCXQ7RTU7 201 aa15.54■□□□□ 0.08
RBFOX1-209ENST00000547427 SVBPQ8N300 66 aa15.54■□□□□ 0.08
RBFOX1-209ENST00000547427 CHAC1Q9BUX1 264 aa15.54■□□□□ 0.08
RBFOX1-209ENST00000547427 IGHV3-64A0A075B6Q5 118 aa15.53■□□□□ 0.08
RBFOX1-209ENST00000547427 GVQW2A0A096LPI5 108 aaPredicted RBP15.53■□□□□ 0.08
RBFOX1-209ENST00000547427 K7EMI3 77 aa15.53■□□□□ 0.08
RBFOX1-209ENST00000547427 SLPIP03973 132 aa15.53■□□□□ 0.08
RBFOX1-209ENST00000547427 CYSLTR1Q9Y271 337 aa15.53■□□□□ 0.08
RBFOX1-209ENST00000547427 IFITM10A6NMD0 228 aa15.52■□□□□ 0.08
RBFOX1-209ENST00000547427 COX7A2LO14548 114 aa15.52■□□□□ 0.08
RBFOX1-209ENST00000547427 MT-ND6P03923 174 aa15.52■□□□□ 0.08
RBFOX1-209ENST00000547427 PYGO1Q9Y3Y4 419 aa15.52■□□□□ 0.08
RBFOX1-209ENST00000547427 C2orf66Q6UXQ4 117 aa15.51■□□□□ 0.07
RBFOX1-209ENST00000547427 PCLOQ9Y6V0 5065 aa15.51■□□□□ 0.07
RBFOX1-209ENST00000547427 ZNF561-AS1K7EIQ3 104 aa15.5■□□□□ 0.07
RBFOX1-209ENST00000547427 FABP9Q0Z7S8 132 aa15.5■□□□□ 0.07
RBFOX1-209ENST00000547427 SDIM1Q6ZPB5 146 aa15.5■□□□□ 0.07
RBFOX1-209ENST00000547427 PRSS3P2Q8NHM4 247 aa15.5■□□□□ 0.07
RBFOX1-209ENST00000547427 FAM104AQ969W3 186 aa15.5■□□□□ 0.07
RBFOX1-209ENST00000547427 MRPL18Q9H0U6 180 aaKnown RBP15.5■□□□□ 0.07
RBFOX1-209ENST00000547427 CIRBP-AS1Q8TBR5 109 aa15.49■□□□□ 0.07
RBFOX1-209ENST00000547427 TMEM141Q96I45 108 aa15.49■□□□□ 0.07
RBFOX1-209ENST00000547427 G0S2P27469 103 aa15.48■□□□□ 0.07
RBFOX1-209ENST00000547427 C5orf38Q86SI9 138 aa15.48■□□□□ 0.07
RBFOX1-209ENST00000547427 DNAH8Q96JB1 4490 aa15.48■□□□□ 0.07
RBFOX1-209ENST00000547427 IGLV4-3A0A075B6K6 122 aa15.47■□□□□ 0.07
RBFOX1-209ENST00000547427 TGIF2-C20orf24A0A0A6YYL0 155 aa15.47■□□□□ 0.07
RBFOX1-209ENST00000547427 LINC00526Q96FQ7 95 aa15.47■□□□□ 0.07
RBFOX1-209ENST00000547427 ALKBH7Q9BT30 221 aaPredicted RBP15.47■□□□□ 0.07
RBFOX1-209ENST00000547427 APOMO95445 188 aa15.46■□□□□ 0.07
RBFOX1-209ENST00000547427 Q6ZN92 141 aa15.46■□□□□ 0.07
RBFOX1-209ENST00000547427 TEX43Q6ZNM6 134 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms