RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 GCSHP23434 173 aa12.24□□□□□ -0.45
RBFOX1-207ENST00000547338 COTL1Q14019 142 aa12.24□□□□□ -0.45
RBFOX1-207ENST00000547338 GTF2H5Q6ZYL4 71 aa12.24□□□□□ -0.45
RBFOX1-207ENST00000547338 MRPL16Q9NX20 251 aaKnown RBP12.24□□□□□ -0.45
RBFOX1-207ENST00000547338 CCL25O15444 150 aa12.23□□□□□ -0.45
RBFOX1-207ENST00000547338 CSNK1G2-AS1Q8NCQ2 148 aa12.23□□□□□ -0.45
RBFOX1-207ENST00000547338 HIST1H4GQ99525 98 aa12.23□□□□□ -0.45
RBFOX1-207ENST00000547338 IGHV3-73A0A0B4J1V6 119 aa12.22□□□□□ -0.45
RBFOX1-207ENST00000547338 LCE6AA0A183 80 aa12.22□□□□□ -0.45
RBFOX1-207ENST00000547338 TTTY13Q9BZ97 58 aa12.22□□□□□ -0.45
RBFOX1-207ENST00000547338 TRBV7-3A0A075B6L6 115 aa12.21□□□□□ -0.45
RBFOX1-207ENST00000547338 TMEM238LA0A1B0GVL6 79 aa12.21□□□□□ -0.45
RBFOX1-207ENST00000547338 A6NJY4 79 aa12.21□□□□□ -0.45
RBFOX1-207ENST00000547338 ZNF815PA8K554 130 aa12.21□□□□□ -0.45
RBFOX1-207ENST00000547338 LEPROTO15243 131 aa12.21□□□□□ -0.45
RBFOX1-207ENST00000547338 MRPS36P82909 103 aaKnown RBP12.21□□□□□ -0.45
RBFOX1-207ENST00000547338 TMEM170BQ5T4T1 132 aa12.21□□□□□ -0.45
RBFOX1-207ENST00000547338 PLEKHB2Q96CS7 222 aa12.21□□□□□ -0.45
RBFOX1-207ENST00000547338 TRGV1A0A0A0MS02 117 aa12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 RPL36AP83881 106 aaKnown RBP12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 AMMECR1LQ6DCA0 310 aa12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 Q6ZSN1 163 aa12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 Q6ZVH6 145 aa12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 DAZ4Q86SG3 579 aaKnown RBP12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 Q8NAQ8 132 aa12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 ZNRF2Q8NHG8 242 aa12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 RPL36ALQ969Q0 106 aaKnown RBP12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 CHCHD7Q9BUK0 85 aa12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 DAZ3Q9NR90 486 aaKnown RBP12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 X6R8D5 127 aa12.21□□□□□ -0.46
RBFOX1-207ENST00000547338 TMEM223A0PJW6 202 aa12.2□□□□□ -0.46
RBFOX1-207ENST00000547338 FXYD2P54710 66 aa12.2□□□□□ -0.46
RBFOX1-207ENST00000547338 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
RBFOX1-207ENST00000547338 SPANXB1Q9NS25 103 aaPredicted RBP12.2□□□□□ -0.46
RBFOX1-207ENST00000547338 HYDINQ4G0P3 5121 aa12.19□□□□□ -0.46
RBFOX1-207ENST00000547338 IGHV3OR16-12A0A075B7B8 117 aa12.19□□□□□ -0.46
RBFOX1-207ENST00000547338 A0A1B0GWB2 263 aa12.19□□□□□ -0.46
RBFOX1-207ENST00000547338 GAGE10A6NGK3 116 aa12.19□□□□□ -0.46
RBFOX1-207ENST00000547338 DEFB4AO15263 64 aa12.19□□□□□ -0.46
RBFOX1-207ENST00000547338 PRM2P04554 102 aa12.19□□□□□ -0.46
RBFOX1-207ENST00000547338 RRN3P1Q2M238 152 aa12.19□□□□□ -0.46
RBFOX1-207ENST00000547338 SCGB1D4Q6XE38 83 aa12.19□□□□□ -0.46
RBFOX1-207ENST00000547338 CSDC2Q9Y534 153 aaKnown RBP12.19□□□□□ -0.46
RBFOX1-207ENST00000547338 K7EQD1 137 aa12.18□□□□□ -0.46
RBFOX1-207ENST00000547338 UBE2D4Q9Y2X8 147 aa12.18□□□□□ -0.46
RBFOX1-207ENST00000547338 TINCRA0A1B0GVN0 87 aa12.17□□□□□ -0.46
RBFOX1-207ENST00000547338 J3QQQ9 107 aa12.17□□□□□ -0.46
RBFOX1-207ENST00000547338 K7EP13 123 aa12.17□□□□□ -0.46
RBFOX1-207ENST00000547338 LGALS3P17931 250 aaKnown RBP12.17□□□□□ -0.46
RBFOX1-207ENST00000547338 OR5A1Q8NGJ0 315 aa12.17□□□□□ -0.46
RBFOX1-207ENST00000547338 TRBV6-4A0A1B0GX49 114 aa12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 A0A1W2PPM0 123 aa12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 FABP2P12104 132 aa12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 ZNF22P17026 224 aaPredicted RBP12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 GTSF1LQ9H1H1 148 aa12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 SMIM9A6NGZ8 99 aa12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 H3BUT2 72 aa12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 H7C423 109 aa12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 SLC25A29Q8N8R3 303 aa12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 PHLDA1Q8WV24 401 aaPredicted RBP12.16□□□□□ -0.46
RBFOX1-207ENST00000547338 K7EP34 96 aa12.15□□□□□ -0.46
RBFOX1-207ENST00000547338 TIRAPP58753 221 aa12.15□□□□□ -0.46
RBFOX1-207ENST00000547338 NANOS2P60321 138 aaKnown RBP12.15□□□□□ -0.46
RBFOX1-207ENST00000547338 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.46
RBFOX1-207ENST00000547338 C12orf74Q32Q52 190 aa12.15□□□□□ -0.46
RBFOX1-207ENST00000547338 OPRPNQ99935 248 aaPredicted RBP12.15□□□□□ -0.46
RBFOX1-207ENST00000547338 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 A0A0J9YY99 117 aa12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 UBE2D3P61077 147 aa12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 UBE2D2P62837 147 aa12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 CEMP1Q6PRD7 247 aaPredicted RBP12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 Q6ZTI0 123 aa12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 FAM19A3Q7Z5A8 133 aa12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 ZNF479Q96JC4 524 aa12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 NOP10Q9NPE3 64 aaKnown RBP12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 NHP2Q9NX24 153 aaKnown RBP12.14□□□□□ -0.47
RBFOX1-207ENST00000547338 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
RBFOX1-207ENST00000547338 EMP1P54849 157 aa12.13□□□□□ -0.47
RBFOX1-207ENST00000547338 DGAT2L7PQ6IED9 249 aa12.13□□□□□ -0.47
RBFOX1-207ENST00000547338 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
RBFOX1-207ENST00000547338 FAM104AQ969W3 186 aa12.13□□□□□ -0.47
RBFOX1-207ENST00000547338 MIFP14174 115 aa12.12□□□□□ -0.47
RBFOX1-207ENST00000547338 RAB37Q96AX2 223 aa12.12□□□□□ -0.47
RBFOX1-207ENST00000547338 NUPR2A6NF83 97 aa12.11□□□□□ -0.47
RBFOX1-207ENST00000547338 C11orf45Q8TAV5 145 aa12.11□□□□□ -0.47
RBFOX1-207ENST00000547338 NACAE9PAV3 2078 aa12.11□□□□□ -0.47
RBFOX1-207ENST00000547338 TRGV2A0A075B6R0 118 aa12.11□□□□□ -0.47
RBFOX1-207ENST00000547338 CELA1Q9UNI1 258 aa12.11□□□□□ -0.47
RBFOX1-207ENST00000547338 IGHV1-58A0A0C4DH39 117 aa12.1□□□□□ -0.47
RBFOX1-207ENST00000547338 IGLL5B9A064 214 aa12.1□□□□□ -0.47
RBFOX1-207ENST00000547338 SPCS1Q9Y6A9 102 aa12.1□□□□□ -0.47
RBFOX1-207ENST00000547338 IGLV5-45A0A087WSX0 123 aa12.09□□□□□ -0.47
RBFOX1-207ENST00000547338 UBE2D1P51668 147 aa12.09□□□□□ -0.47
RBFOX1-207ENST00000547338 Q9UF83 564 aa12.09□□□□□ -0.47
RBFOX1-207ENST00000547338 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.08□□□□□ -0.48
RBFOX1-207ENST00000547338 GAGE12BA1L429 117 aa12.08□□□□□ -0.48
RBFOX1-207ENST00000547338 IGKV2-29A2NJV5 120 aaPredicted RBP12.08□□□□□ -0.48
RBFOX1-207ENST00000547338 TMEM238C9JI98 176 aa12.08□□□□□ -0.48
RBFOX1-207ENST00000547338 HERVK_113P63121 156 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms