RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 CAMPP49913 170 aa9.54□□□□□ -0.88
CLSTN3-216ENST00000545663 Q0VG73 95 aa9.54□□□□□ -0.88
CLSTN3-216ENST00000545663 TMEM97Q5BJF2 176 aa9.54□□□□□ -0.88
CLSTN3-216ENST00000545663 MRPL54Q6P161 138 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-216ENST00000545663 GATD1Q8NB37 220 aa9.54□□□□□ -0.88
CLSTN3-216ENST00000545663 M0QY20 66 aa9.53□□□□□ -0.88
CLSTN3-216ENST00000545663 PPBPP02775 128 aa9.53□□□□□ -0.88
CLSTN3-216ENST00000545663 ELOBQ15370 118 aa9.53□□□□□ -0.88
CLSTN3-216ENST00000545663 NIT2Q9NQR4 276 aa9.53□□□□□ -0.88
CLSTN3-216ENST00000545663 SLPIP03973 132 aa9.52□□□□□ -0.89
CLSTN3-216ENST00000545663 PRR4Q16378 134 aa9.52□□□□□ -0.89
CLSTN3-216ENST00000545663 FAM104BQ5XKR9 115 aa9.52□□□□□ -0.89
CLSTN3-216ENST00000545663 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
CLSTN3-216ENST00000545663 IGHV3-64A0A075B6Q5 118 aa9.51□□□□□ -0.89
CLSTN3-216ENST00000545663 RAB4AP20338 218 aa9.51□□□□□ -0.89
CLSTN3-216ENST00000545663 SMCO4Q9NRQ5 59 aa9.51□□□□□ -0.89
CLSTN3-216ENST00000545663 MT-ND6P03923 174 aa9.5□□□□□ -0.89
CLSTN3-216ENST00000545663 CNBPP62633 177 aaKnown RBP9.5□□□□□ -0.89
CLSTN3-216ENST00000545663 AMN1Q8IY45 258 aa9.5□□□□□ -0.89
CLSTN3-216ENST00000545663 NEXN-AS1Q8NBZ9 246 aa9.5□□□□□ -0.89
CLSTN3-216ENST00000545663 TRBV24-1A0A075B6N3 115 aa9.49□□□□□ -0.89
CLSTN3-216ENST00000545663 UBE2D3P61077 147 aa9.49□□□□□ -0.89
CLSTN3-216ENST00000545663 UBE2D2P62837 147 aa9.49□□□□□ -0.89
CLSTN3-216ENST00000545663 KRTAP26-1Q6PEX3 210 aa9.49□□□□□ -0.89
CLSTN3-216ENST00000545663 GNB1LQ9BYB4 327 aa9.49□□□□□ -0.89
CLSTN3-216ENST00000545663 LAMTOR2Q9Y2Q5 125 aa9.49□□□□□ -0.89
CLSTN3-216ENST00000545663 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
CLSTN3-216ENST00000545663 TMEM262E9PQX1 116 aa9.48□□□□□ -0.89
CLSTN3-216ENST00000545663 CRPP02741 224 aa9.48□□□□□ -0.89
CLSTN3-216ENST00000545663 S100A1P23297 94 aa9.48□□□□□ -0.89
CLSTN3-216ENST00000545663 CKS2P33552 79 aa9.48□□□□□ -0.89
CLSTN3-216ENST00000545663 PKIAP61925 76 aa9.48□□□□□ -0.89
CLSTN3-216ENST00000545663 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
CLSTN3-216ENST00000545663 hDV102S1A0JD36 115 aa9.47□□□□□ -0.89
CLSTN3-216ENST00000545663 TCAPO15273 167 aa9.47□□□□□ -0.89
CLSTN3-216ENST00000545663 MRPL51Q4U2R6 128 aaKnown RBP9.47□□□□□ -0.89
CLSTN3-216ENST00000545663 ORMDL3Q8N138 153 aa9.47□□□□□ -0.89
CLSTN3-216ENST00000545663 ST20Q9HBF5 79 aa9.47□□□□□ -0.89
CLSTN3-216ENST00000545663 MAJINQ3KP22 176 aa9.46□□□□□ -0.9
CLSTN3-216ENST00000545663 C20orf78Q9BR46 151 aa9.46□□□□□ -0.9
CLSTN3-216ENST00000545663 TRAV26-2A0A0B4J265 109 aa9.45□□□□□ -0.9
CLSTN3-216ENST00000545663 NCR2O95944 276 aa9.45□□□□□ -0.9
CLSTN3-216ENST00000545663 ANGP03950 147 aaKnown RBP9.45□□□□□ -0.9
CLSTN3-216ENST00000545663 COX6A2Q02221 97 aa9.45□□□□□ -0.9
CLSTN3-216ENST00000545663 MPV17L2Q567V2 206 aa9.45□□□□□ -0.9
CLSTN3-216ENST00000545663 IGKV2-24A0A0C4DH68 120 aa9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 SDHAF1A6NFY7 115 aa9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 VCYO14598 125 aa9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 APCSP02743 223 aa9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 RPL32P62910 135 aaKnown RBP9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 COTL1Q14019 142 aa9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 TMEM136Q6ZRR5 245 aa9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 STPG4Q8N801 248 aa9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 PRR26Q8N8Z3 221 aa9.44□□□□□ -0.9
CLSTN3-216ENST00000545663 TRBV25-1A0A075B6N4 114 aa9.43□□□□□ -0.9
CLSTN3-216ENST00000545663 TRBV6-8A0A0A6YYG3 113 aa9.43□□□□□ -0.9
CLSTN3-216ENST00000545663 I3L3M4 83 aa9.43□□□□□ -0.9
CLSTN3-216ENST00000545663 SUMO2P61956 95 aaKnown RBP9.43□□□□□ -0.9
CLSTN3-216ENST00000545663 KIR2DL4Q99706 377 aa9.43□□□□□ -0.9
CLSTN3-216ENST00000545663 TRBV27A0A0K0K1C4 114 aa9.42□□□□□ -0.9
CLSTN3-216ENST00000545663 D6R8Y8 96 aa9.42□□□□□ -0.9
CLSTN3-216ENST00000545663 PMCHP20382 165 aa9.42□□□□□ -0.9
CLSTN3-216ENST00000545663 MIAQ16674 131 aa9.42□□□□□ -0.9
CLSTN3-216ENST00000545663 PRSS3P2Q8NHM4 247 aa9.42□□□□□ -0.9
CLSTN3-216ENST00000545663 PRELID3AQ96N28 172 aa9.42□□□□□ -0.9
CLSTN3-216ENST00000545663 IGHV1-24A0A0C4DH33 117 aa9.41□□□□□ -0.9
CLSTN3-216ENST00000545663 TNFRSF6BO95407 300 aa9.41□□□□□ -0.9
CLSTN3-216ENST00000545663 POLR2KP53803 58 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-216ENST00000545663 SMAGPQ0VAQ4 97 aa9.41□□□□□ -0.9
CLSTN3-216ENST00000545663 IQCJQ1A5X6 159 aa9.41□□□□□ -0.9
CLSTN3-216ENST00000545663 NRACQ8N912 160 aa9.41□□□□□ -0.9
CLSTN3-216ENST00000545663 RPL39LQ96EH5 51 aaKnown RBP9.41□□□□□ -0.9
CLSTN3-216ENST00000545663 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
CLSTN3-216ENST00000545663 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.4□□□□□ -0.9
CLSTN3-216ENST00000545663 TGIF2-C20orf24A0A0A6YYL0 155 aa9.4□□□□□ -0.9
CLSTN3-216ENST00000545663 K7EMI3 77 aa9.4□□□□□ -0.9
CLSTN3-216ENST00000545663 MAP1LC3AQ9H492 121 aa9.4□□□□□ -0.9
CLSTN3-216ENST00000545663 TRAPPC1Q9Y5R8 145 aa9.4□□□□□ -0.9
CLSTN3-216ENST00000545663 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 PRSS47A8MTI9 375 aa9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 H7C423 109 aa9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 RPS10P46783 165 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 FABP9Q0Z7S8 132 aa9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 CBLN2Q8IUK8 224 aa9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 ZNF664Q8N3J9 261 aa9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 TMEM243Q9BU79 118 aa9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 MRPL18Q9H0U6 180 aaKnown RBP9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 AP5S1Q9NUS5 200 aa9.39□□□□□ -0.91
CLSTN3-216ENST00000545663 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
CLSTN3-216ENST00000545663 UBE2L6O14933 153 aa9.38□□□□□ -0.91
CLSTN3-216ENST00000545663 ATP6V1G1O75348 118 aa9.38□□□□□ -0.91
CLSTN3-216ENST00000545663 G0S2P27469 103 aa9.38□□□□□ -0.91
CLSTN3-216ENST00000545663 FCER1GP30273 86 aa9.38□□□□□ -0.91
CLSTN3-216ENST00000545663 AMTP48728 403 aa9.38□□□□□ -0.91
CLSTN3-216ENST00000545663 Q6ZRP5 223 aa9.38□□□□□ -0.91
CLSTN3-216ENST00000545663 LINC00269Q8N2A0 174 aa9.38□□□□□ -0.91
CLSTN3-216ENST00000545663 TMEM18Q96B42 140 aa9.38□□□□□ -0.91
CLSTN3-216ENST00000545663 CHCHD5Q9BSY4 110 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms