RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SUMO4Q6EEV6 95 aa5.67□□□□□ -1.5
CHD4-212ENST00000545083 FMC1Q96HJ9 113 aa5.67□□□□□ -1.5
CHD4-212ENST00000545083 TRAV1-1A0A0B4J248 108 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 C7orf77A4D0Y5 90 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 IFNA1P01562 189 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 MBP02144 154 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 MT-ND6P03923 174 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 MGPP08493 103 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 CXCL1P09341 107 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 OR5AL1P0C617 328 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 RPL35P42766 123 aaKnown RBP5.66□□□□□ -1.5
CHD4-212ENST00000545083 SERF2P84101 59 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 SRSF3P84103 164 aaKnown RBP5.66□□□□□ -1.5
CHD4-212ENST00000545083 PNRC1Q12796 327 aaPredicted RBP5.66□□□□□ -1.5
CHD4-212ENST00000545083 C1orf137Q5JT78 98 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 AKR1C8PQ5T2L2 129 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 FAM213BQ8TBF2 198 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 CARD19Q96LW7 228 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 AP1S3Q96PC3 154 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
CHD4-212ENST00000545083 C5orf52A6NGY3 159 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 UBE2L6O14933 153 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 PAGE4O60829 102 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 KRTAP1-4P0C5Y4 121 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 SMIM17P0DL12 118 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 RAB5AP20339 215 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 S100PP25815 95 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 AMTP48728 403 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 GAGE2BQ13066 116 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 PGLYRP4Q96LB8 373 aa5.65□□□□□ -1.5
CHD4-212ENST00000545083 PCP4L1A6NKN8 68 aa5.64□□□□□ -1.51
CHD4-212ENST00000545083 PHF5AQ7RTV0 110 aaKnown RBP5.64□□□□□ -1.51
CHD4-212ENST00000545083 FER1L6-AS1Q8NA97 138 aa5.64□□□□□ -1.51
CHD4-212ENST00000545083 DIRC1Q969H9 104 aa5.64□□□□□ -1.51
CHD4-212ENST00000545083 CTDSP1Q9GZU7 261 aa5.64□□□□□ -1.51
CHD4-212ENST00000545083 TMEM242Q9NWH2 141 aa5.64□□□□□ -1.51
CHD4-212ENST00000545083 PKIGQ9Y2B9 76 aa5.64□□□□□ -1.51
CHD4-212ENST00000545083 IGLV1-50A0A075B6I6 118 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 CTXND1A0A1B0GTU2 59 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 H0Y9J4 135 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 AKR1C3P42330 323 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 SYCNQ0VAF6 134 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 COTL1Q14019 142 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 C9orf116Q5BN46 136 aaPredicted RBP5.63□□□□□ -1.51
CHD4-212ENST00000545083 RASL11AQ6T310 242 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 KRTAP11-1Q8IUC1 163 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 BTF3L4Q96K17 158 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 MLST8Q9BVC4 326 aa5.63□□□□□ -1.51
CHD4-212ENST00000545083 IGHV1-58A0A0C4DH39 117 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 LOC107984640A0A0U1RRK4 108 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 C9JQL5 133 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 SRP19P09132 144 aaKnown RBP5.62□□□□□ -1.51
CHD4-212ENST00000545083 BCL2P10415 239 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 S100A2P29034 98 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 XCL1P47992 114 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 SNRPEP62304 92 aaKnown RBP5.62□□□□□ -1.51
CHD4-212ENST00000545083 LINC00469Q8N7U9 141 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 MBD3L1Q8WWY6 194 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 NIT2Q9NQR4 276 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
CHD4-212ENST00000545083 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.61□□□□□ -1.51
CHD4-212ENST00000545083 IGKV2-29A2NJV5 120 aaPredicted RBP5.61□□□□□ -1.51
CHD4-212ENST00000545083 CCL25O15444 150 aa5.61□□□□□ -1.51
CHD4-212ENST00000545083 IGLC6P0CF74 106 aa5.61□□□□□ -1.51
CHD4-212ENST00000545083 PCP4P48539 62 aa5.61□□□□□ -1.51
CHD4-212ENST00000545083 FABP9Q0Z7S8 132 aa5.61□□□□□ -1.51
CHD4-212ENST00000545083 RNASEKQ6P5S7 137 aaKnown RBP5.61□□□□□ -1.51
CHD4-212ENST00000545083 FHITP49789 147 aa5.6□□□□□ -1.51
CHD4-212ENST00000545083 CAMPP49913 170 aa5.6□□□□□ -1.51
CHD4-212ENST00000545083 AMMECR1LQ6DCA0 310 aa5.6□□□□□ -1.51
CHD4-212ENST00000545083 TPPP3Q9BW30 176 aa5.6□□□□□ -1.51
CHD4-212ENST00000545083 LINC00959A0A1B0GUT2 108 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 SCO2A0A1W2PP80 73 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 MAP1LC3B2A6NCE7 125 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 TMEM250H0YL14 139 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.59□□□□□ -1.51
CHD4-212ENST00000545083 GATCO43716 136 aaKnown RBP5.59□□□□□ -1.51
CHD4-212ENST00000545083 FGF6P10767 208 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 NTF3P20783 257 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 MEF2BQ02080 365 aaPredicted RBP5.59□□□□□ -1.51
CHD4-212ENST00000545083 BAGE2Q86Y30 109 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 NUP35Q8NFH5 326 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 OR5A1Q8NGJ0 315 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 YPEL4Q96NS1 127 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 MAP1LC3BQ9GZQ8 125 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 MANBALQ9NQG1 85 aa5.59□□□□□ -1.51
CHD4-212ENST00000545083 IGLV4-69A0A075B6H9 119 aa5.58□□□□□ -1.52
CHD4-212ENST00000545083 A0A087WZ39 114 aa5.58□□□□□ -1.52
CHD4-212ENST00000545083 PPP1R2P9O14990 202 aa5.58□□□□□ -1.52
CHD4-212ENST00000545083 TSPAN13O95857 204 aa5.58□□□□□ -1.52
CHD4-212ENST00000545083 UBE2D1P51668 147 aa5.58□□□□□ -1.52
CHD4-212ENST00000545083 NAT8Q9UHE5 227 aa5.58□□□□□ -1.52
CHD4-212ENST00000545083 CHTOPQ9Y3Y2 248 aaKnown RBP5.58□□□□□ -1.52
CHD4-212ENST00000545083 TRBV24-1A0A075B6N3 115 aa5.57□□□□□ -1.52
CHD4-212ENST00000545083 APOMO95445 188 aa5.57□□□□□ -1.52
CHD4-212ENST00000545083 RPL18AQ02543 176 aaKnown RBP5.57□□□□□ -1.52
CHD4-212ENST00000545083 ISOC2Q96AB3 205 aa5.57□□□□□ -1.52
CHD4-212ENST00000545083 OPRPNQ99935 248 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms