RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 AMN1Q8IY45 258 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 DEFB104AQ8WTQ1 72 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 TMEM18Q96B42 140 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 RNF185Q96GF1 192 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 KRTAP9-3Q9BYQ3 159 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 PKHD1P08F94 4074 aa4.86□□□□□ -1.63
CPSF7-224ENST00000544990 DNAH11Q96DT5 4516 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 IGLV4-60A0A075B6I1 120 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.85□□□□□ -1.63
CPSF7-224ENST00000544990 LINC00862A6NCI5 91 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 F8W036 122 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 HLA-DQA1P01909 254 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 CAMPP49913 170 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 KRTAP10-1P60331 282 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 RNASEKQ6P5S7 137 aaKnown RBP4.85□□□□□ -1.63
CPSF7-224ENST00000544990 CLPSL2Q6UWE3 100 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 C20orf203Q8NBC4 194 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 BTF3L4Q96K17 158 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 TMEM70Q9BUB7 260 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 PAM16Q9Y3D7 125 aa4.85□□□□□ -1.63
CPSF7-224ENST00000544990 VCYO14598 125 aa4.84□□□□□ -1.63
CPSF7-224ENST00000544990 MT-ND4LP03901 98 aa4.84□□□□□ -1.63
CPSF7-224ENST00000544990 ZNF25P17030 456 aaPredicted RBP4.84□□□□□ -1.63
CPSF7-224ENST00000544990 POLR2KP53803 58 aaKnown RBP4.84□□□□□ -1.63
CPSF7-224ENST00000544990 HBBP68871 147 aa4.84□□□□□ -1.63
CPSF7-224ENST00000544990 FAM104BQ5XKR9 115 aa4.84□□□□□ -1.63
CPSF7-224ENST00000544990 TMEM101Q96IK0 257 aa4.84□□□□□ -1.63
CPSF7-224ENST00000544990 IGLV10-54A0A075B6I4 117 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-224ENST00000544990 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 IGLV5-39A0A0G2JS06 123 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 TRBV27A0A0K0K1C4 114 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 IGKV2-29A2NJV5 120 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-224ENST00000544990 SMKR1H3BMG3 65 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 FGF6P10767 208 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 FCER1GP30273 86 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 CKS2P33552 79 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 RPS10P46783 165 aaKnown RBP4.83□□□□□ -1.64
CPSF7-224ENST00000544990 XGP55808 180 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 SMAGPQ0VAQ4 97 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 MRPL51Q4U2R6 128 aaKnown RBP4.83□□□□□ -1.64
CPSF7-224ENST00000544990 MRPL54Q6P161 138 aaKnown RBP4.83□□□□□ -1.64
CPSF7-224ENST00000544990 UQCC3Q6UW78 93 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 ATP5L2Q7Z4Y8 100 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 KIR2DL4Q99706 377 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 TMEM242Q9NWH2 141 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 KIAA1109Q2LD37 5005 aa4.83□□□□□ -1.64
CPSF7-224ENST00000544990 DYNC1H1Q14204 4646 aaKnown RBP4.82□□□□□ -1.64
CPSF7-224ENST00000544990 IGKV3OR2-268A0A0C4DH90 116 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 C7orf77A4D0Y5 90 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 TCAPO15273 167 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 TSHBP01222 138 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 PPBPP02775 128 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 ESDP10768 282 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 IFITM2Q01629 132 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 NRACQ8N912 160 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 C20orf78Q9BR46 151 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 RYR1P21817 5038 aa4.82□□□□□ -1.64
CPSF7-224ENST00000544990 TRBV24-1A0A075B6N3 115 aa4.81□□□□□ -1.64
CPSF7-224ENST00000544990 A0A1B0GXF2 115 aa4.81□□□□□ -1.64
CPSF7-224ENST00000544990 EPM2AB3EWF7 344 aa4.81□□□□□ -1.64
CPSF7-224ENST00000544990 LCE1DQ5T752 114 aa4.81□□□□□ -1.64
CPSF7-224ENST00000544990 KRTAP26-1Q6PEX3 210 aa4.81□□□□□ -1.64
CPSF7-224ENST00000544990 OR5A1Q8NGJ0 315 aa4.81□□□□□ -1.64
CPSF7-224ENST00000544990 TMEM218A2RU14 115 aa4.8□□□□□ -1.64
CPSF7-224ENST00000544990 D6R8Y8 96 aa4.8□□□□□ -1.64
CPSF7-224ENST00000544990 PHOX2AO14813 284 aa4.8□□□□□ -1.64
CPSF7-224ENST00000544990 PRSS1P07477 247 aa4.8□□□□□ -1.64
CPSF7-224ENST00000544990 RPL32P62910 135 aaKnown RBP4.8□□□□□ -1.64
CPSF7-224ENST00000544990 SS18Q15532 418 aa4.8□□□□□ -1.64
CPSF7-224ENST00000544990 TMEM136Q6ZRR5 245 aa4.8□□□□□ -1.64
CPSF7-224ENST00000544990 MRPL52Q86TS9 123 aaKnown RBP4.8□□□□□ -1.64
CPSF7-224ENST00000544990 ORMDL3Q8N138 153 aa4.8□□□□□ -1.64
CPSF7-224ENST00000544990 CHCHD10Q8WYQ3 142 aaPredicted RBP4.8□□□□□ -1.64
CPSF7-224ENST00000544990 LRP1BQ9NZR2 4599 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-224ENST00000544990 hDV102S1A0JD36 115 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 LINC01620Q4KN68 170 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 Q6ZSA8 131 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 ZNF664Q8N3J9 261 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 IMMP2LQ96T52 175 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 SMIM2Q9BVW6 85 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 SEC11CQ9BY50 192 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 KRTAP4-5Q9BYR2 181 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 CDC42SE2Q9NRR3 84 aa4.79□□□□□ -1.64
CPSF7-224ENST00000544990 CSDC2Q9Y534 153 aaKnown RBP4.79□□□□□ -1.64
CPSF7-224ENST00000544990 DNAH5Q8TE73 4624 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 LINC00959A0A1B0GUT2 108 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 CCL25O15444 150 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 NPYP01303 97 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 SMR3BP02814 79 aaPredicted RBP4.78□□□□□ -1.64
CPSF7-224ENST00000544990 RAB5AP20339 215 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 HAMPP81172 84 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 COMMD7Q86VX2 200 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 C9orf163Q8N9P6 203 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 PRELID3AQ96N28 172 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 TIMM21Q9BVV7 248 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 LAMTOR2Q9Y2Q5 125 aa4.78□□□□□ -1.64
CPSF7-224ENST00000544990 UBE2D4Q9Y2X8 147 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms