RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 TRBV10-2A0A0K0K1G8 114 aa8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 DNAJC9-AS1A6NH13 148 aa8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 OPRPNQ99935 248 aaPredicted RBP8.94□□□□□ -0.98
LRTOMT-221ENST00000544409 ZNF22P17026 224 aaPredicted RBP8.93□□□□□ -0.98
LRTOMT-221ENST00000544409 TEX15Q9BXT5 2789 aa8.93□□□□□ -0.98
LRTOMT-221ENST00000544409 INSP01308 110 aa8.93□□□□□ -0.98
LRTOMT-221ENST00000544409 HIST2H2BDQ6DRA6 164 aa8.93□□□□□ -0.98
LRTOMT-221ENST00000544409 MUSTN1Q8IVN3 82 aa8.93□□□□□ -0.98
LRTOMT-221ENST00000544409 WFDC11Q8NEX6 87 aa8.93□□□□□ -0.98
LRTOMT-221ENST00000544409 LINC00467Q9BRT7 94 aa8.93□□□□□ -0.98
LRTOMT-221ENST00000544409 PRM2P04554 102 aa8.92□□□□□ -0.98
LRTOMT-221ENST00000544409 PROK1P58294 105 aa8.92□□□□□ -0.98
LRTOMT-221ENST00000544409 IGHV3-64A0A075B6Q5 118 aa8.92□□□□□ -0.98
LRTOMT-221ENST00000544409 SMIM9A6NGZ8 99 aa8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 LGALS3P17931 250 aaKnown RBP8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 FAM19A5Q7Z5A7 132 aaPredicted RBP8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 IGLV4-3A0A075B6K6 122 aa8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 TRAV25A0A0B4J276 109 aa8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 J3QQQ9 107 aa8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 HERVK_113P63121 156 aa8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 SPXQ9BT56 116 aa8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 H7C423 109 aa8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 TRIAP1O43715 76 aa8.91□□□□□ -0.98
LRTOMT-221ENST00000544409 NDUFA7O95182 113 aa8.9□□□□□ -0.98
LRTOMT-221ENST00000544409 CD28P10747 220 aa8.9□□□□□ -0.98
LRTOMT-221ENST00000544409 PYGO1Q9Y3Y4 419 aa8.9□□□□□ -0.98
LRTOMT-221ENST00000544409 TMEM223A0PJW6 202 aa8.9□□□□□ -0.98
LRTOMT-221ENST00000544409 C11orf72Q8NBR9 251 aa8.9□□□□□ -0.98
LRTOMT-221ENST00000544409 HELZ2Q9BYK8 2649 aaKnown RBP8.9□□□□□ -0.98
LRTOMT-221ENST00000544409 NACAE9PAV3 2078 aa8.9□□□□□ -0.99
LRTOMT-221ENST00000544409 A0A1W2PRX2 142 aa8.89□□□□□ -0.99
LRTOMT-221ENST00000544409 LEPROTO15243 131 aa8.89□□□□□ -0.99
LRTOMT-221ENST00000544409 AMELXQ99217 191 aa8.89□□□□□ -0.99
LRTOMT-221ENST00000544409 C11orf44Q8N8P7 122 aa8.89□□□□□ -0.99
LRTOMT-221ENST00000544409 TMEM101Q96IK0 257 aa8.89□□□□□ -0.99
LRTOMT-221ENST00000544409 STHQ8IWL8 128 aa8.89□□□□□ -0.99
LRTOMT-221ENST00000544409 A0A0J9YXV3 536 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 CCL24O00175 119 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 BEAN1Q3B7T3 259 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 ODF3L2Q3SX64 289 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 Q6ZSN1 163 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 C3orf22Q8N5N4 141 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 ESM1Q9NQ30 184 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 MYO9AB2RTY4 2548 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 PRSS2P07478 247 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 XCL2Q9UBD3 114 aa8.88□□□□□ -0.99
LRTOMT-221ENST00000544409 A0A0B4J2C4 111 aa8.87□□□□□ -0.99
LRTOMT-221ENST00000544409 TRBV7-7A0A0K0K1E9 115 aa8.87□□□□□ -0.99
LRTOMT-221ENST00000544409 CLEC2BQ92478 149 aa8.87□□□□□ -0.99
LRTOMT-221ENST00000544409 RS1O15537 224 aa8.87□□□□□ -0.99
LRTOMT-221ENST00000544409 IGHV3-53P01767 116 aa8.87□□□□□ -0.99
LRTOMT-221ENST00000544409 ADARB2-AS1A8MUL3 147 aa8.86□□□□□ -0.99
LRTOMT-221ENST00000544409 APCP25054 2843 aa8.86□□□□□ -0.99
LRTOMT-221ENST00000544409 Q9UF83 564 aa8.86□□□□□ -0.99
LRTOMT-221ENST00000544409 ITPR3Q14573 2671 aa8.86□□□□□ -0.99
LRTOMT-221ENST00000544409 J3KT08 172 aa8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 HIST2H2BCQ6DN03 193 aa8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 CHCHD7Q9BUK0 85 aa8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 TRBV30A0A0K0K1B3 111 aa8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 FAM104AQ969W3 186 aa8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 FLNBO75369 2602 aaKnown RBP8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 TLN2Q9Y4G6 2542 aa8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 IGHV3OR16-12A0A075B7B8 117 aa8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 NPC2P61916 151 aa8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 MRPS36P82909 103 aaKnown RBP8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 CITED2Q99967 270 aaPredicted RBP8.85□□□□□ -0.99
LRTOMT-221ENST00000544409 TRAV8-3A0A0A6YYJ7 113 aa8.84□□□□□ -0.99
LRTOMT-221ENST00000544409 UQCRQO14949 82 aa8.84□□□□□ -0.99
LRTOMT-221ENST00000544409 C1orf158Q8N1D5 194 aa8.84□□□□□ -0.99
LRTOMT-221ENST00000544409 GCN1Q92616 2671 aaKnown RBP8.84□□□□□ -0.99
LRTOMT-221ENST00000544409 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
LRTOMT-221ENST00000544409 ICOSQ9Y6W8 199 aa8.83□□□□□ -1
LRTOMT-221ENST00000544409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.83□□□□□ -1
LRTOMT-221ENST00000544409 IGHV3-38A0A0C4DH36 116 aa8.83□□□□□ -1
LRTOMT-221ENST00000544409 FAM240AA0A1B0GVK7 77 aa8.83□□□□□ -1
LRTOMT-221ENST00000544409 IGKV2-29A2NJV5 120 aaPredicted RBP8.83□□□□□ -1
LRTOMT-221ENST00000544409 TIMM21Q9BVV7 248 aa8.83□□□□□ -1
LRTOMT-221ENST00000544409 SONP18583 2426 aaKnown RBP8.83□□□□□ -1
LRTOMT-221ENST00000544409 COX6CP09669 75 aa8.83□□□□□ -1
LRTOMT-221ENST00000544409 RNASE13Q5GAN3 156 aaKnown RBP8.83□□□□□ -1
LRTOMT-221ENST00000544409 LINC00526Q96FQ7 95 aa8.83□□□□□ -1
LRTOMT-221ENST00000544409 LINC01600Q96MT4 127 aa8.83□□□□□ -1
LRTOMT-221ENST00000544409 ZNF469Q96JG9 3925 aaPredicted RBP8.82□□□□□ -1
LRTOMT-221ENST00000544409 TRGV1A0A0A0MS02 117 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 H3BT86 120 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 RNASE1P07998 156 aaKnown RBP8.82□□□□□ -1
LRTOMT-221ENST00000544409 KRTAP1-1Q07627 177 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 LINC01006Q8NI28 216 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 IL17DQ8TAD2 202 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 C16orf95Q9H693 158 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 AKAP9Q99996 3911 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 TINCRA0A1B0GVN0 87 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 IGHV3-30-3P0DP02 117 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 CMC4P56277 68 aaPredicted RBP8.82□□□□□ -1
LRTOMT-221ENST00000544409 GAGE2AQ6NT46 116 aa8.82□□□□□ -1
LRTOMT-221ENST00000544409 SMCR5Q8TEV8 140 aa8.81□□□□□ -1
LRTOMT-221ENST00000544409 WNK1Q9H4A3 2382 aa8.81□□□□□ -1
LRTOMT-221ENST00000544409 IGHV1-58A0A0C4DH39 117 aa8.8□□□□□ -1
LRTOMT-221ENST00000544409 A0A0J9YXY3 114 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms