RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 C9orf116Q5BN46 136 aaPredicted RBP9.36□□□□□ -0.91
CD4-212ENST00000544344 C1orf137Q5JT78 98 aa9.36□□□□□ -0.91
CD4-212ENST00000544344 LCE2AQ5TA79 106 aaPredicted RBP9.36□□□□□ -0.91
CD4-212ENST00000544344 IGLV4-69A0A075B6H9 119 aa9.35□□□□□ -0.91
CD4-212ENST00000544344 SDHAF1A6NFY7 115 aa9.35□□□□□ -0.91
CD4-212ENST00000544344 H2AFB1P0C5Y9 115 aa9.35□□□□□ -0.91
CD4-212ENST00000544344 ESDP10768 282 aa9.35□□□□□ -0.91
CD4-212ENST00000544344 FOXA3P55318 350 aaPredicted RBP9.35□□□□□ -0.91
CD4-212ENST00000544344 TWIST1Q15672 202 aa9.35□□□□□ -0.91
CD4-212ENST00000544344 CD164L2Q6UWJ8 174 aa9.35□□□□□ -0.91
CD4-212ENST00000544344 PHF5AQ7RTV0 110 aaKnown RBP9.35□□□□□ -0.91
CD4-212ENST00000544344 NUP35Q8NFH5 326 aa9.35□□□□□ -0.91
CD4-212ENST00000544344 SMIM12Q96EX1 92 aa9.35□□□□□ -0.91
CD4-212ENST00000544344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.34□□□□□ -0.91
CD4-212ENST00000544344 EIF5AP63241 154 aaKnown RBP9.34□□□□□ -0.91
CD4-212ENST00000544344 MEF2BQ02080 365 aaPredicted RBP9.34□□□□□ -0.91
CD4-212ENST00000544344 KRTAP9-6A0A140TA67 174 aa9.33□□□□□ -0.92
CD4-212ENST00000544344 IGLV7-43P04211 117 aa9.33□□□□□ -0.92
CD4-212ENST00000544344 KRTAP1-4P0C5Y4 121 aa9.33□□□□□ -0.92
CD4-212ENST00000544344 GNG4P50150 75 aa9.33□□□□□ -0.92
CD4-212ENST00000544344 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
CD4-212ENST00000544344 DIRC1Q969H9 104 aa9.33□□□□□ -0.92
CD4-212ENST00000544344 BTF3L4Q96K17 158 aa9.33□□□□□ -0.92
CD4-212ENST00000544344 CDC42SE2Q9NRR3 84 aa9.33□□□□□ -0.92
CD4-212ENST00000544344 GNG13Q9P2W3 67 aa9.33□□□□□ -0.92
CD4-212ENST00000544344 APOMO95445 188 aa9.32□□□□□ -0.92
CD4-212ENST00000544344 TSHBP01222 138 aa9.32□□□□□ -0.92
CD4-212ENST00000544344 SS18Q15532 418 aa9.32□□□□□ -0.92
CD4-212ENST00000544344 NUDT10Q8NFP7 164 aa9.32□□□□□ -0.92
CD4-212ENST00000544344 ISOC2Q96AB3 205 aa9.32□□□□□ -0.92
CD4-212ENST00000544344 NUDT11Q96G61 164 aa9.32□□□□□ -0.92
CD4-212ENST00000544344 TMEM101Q96IK0 257 aa9.32□□□□□ -0.92
CD4-212ENST00000544344 MANBALQ9NQG1 85 aa9.32□□□□□ -0.92
CD4-212ENST00000544344 H0Y9J4 135 aa9.31□□□□□ -0.92
CD4-212ENST00000544344 I3L3M4 83 aa9.31□□□□□ -0.92
CD4-212ENST00000544344 MRPL52Q86TS9 123 aaKnown RBP9.31□□□□□ -0.92
CD4-212ENST00000544344 IGLV1-50A0A075B6I6 118 aa9.3□□□□□ -0.92
CD4-212ENST00000544344 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
CD4-212ENST00000544344 A0A0U1RQV1 116 aa9.3□□□□□ -0.92
CD4-212ENST00000544344 PRR4Q16378 134 aa9.3□□□□□ -0.92
CD4-212ENST00000544344 EIF5AL1Q6IS14 154 aaKnown RBP9.3□□□□□ -0.92
CD4-212ENST00000544344 CAMK2N2Q96S95 79 aa9.3□□□□□ -0.92
CD4-212ENST00000544344 TRAV1-1A0A0B4J248 108 aa9.29□□□□□ -0.92
CD4-212ENST00000544344 PMCHP20382 165 aa9.29□□□□□ -0.92
CD4-212ENST00000544344 COMMD7Q86VX2 200 aa9.29□□□□□ -0.92
CD4-212ENST00000544344 TMEM242Q9NWH2 141 aa9.29□□□□□ -0.92
CD4-212ENST00000544344 RPL18AQ02543 176 aaKnown RBP9.28□□□□□ -0.92
CD4-212ENST00000544344 ALKAL2Q6UX46 152 aa9.28□□□□□ -0.92
CD4-212ENST00000544344 MRAP2Q96G30 205 aa9.28□□□□□ -0.92
CD4-212ENST00000544344 C2orf48Q96LS8 159 aa9.28□□□□□ -0.92
CD4-212ENST00000544344 OPRPNQ99935 248 aaPredicted RBP9.28□□□□□ -0.92
CD4-212ENST00000544344 RNASE7Q9H1E1 156 aaKnown RBP9.28□□□□□ -0.92
CD4-212ENST00000544344 COX7A2LO14548 114 aa9.27□□□□□ -0.93
CD4-212ENST00000544344 MALP21145 153 aa9.27□□□□□ -0.93
CD4-212ENST00000544344 RPP21Q9H633 154 aaKnown RBP9.27□□□□□ -0.93
CD4-212ENST00000544344 BIN3Q9NQY0 253 aa9.27□□□□□ -0.93
CD4-212ENST00000544344 FAM168BA1KXE4 195 aa9.26□□□□□ -0.93
CD4-212ENST00000544344 K7EN84 100 aa9.26□□□□□ -0.93
CD4-212ENST00000544344 A0A087WZ39 114 aa9.25□□□□□ -0.93
CD4-212ENST00000544344 C1orf196B1AJZ1 125 aa9.25□□□□□ -0.93
CD4-212ENST00000544344 PDE6DO43924 150 aa9.25□□□□□ -0.93
CD4-212ENST00000544344 POLR2KP53803 58 aaKnown RBP9.25□□□□□ -0.93
CD4-212ENST00000544344 RNF151Q2KHN1 245 aa9.25□□□□□ -0.93
CD4-212ENST00000544344 UQCC3Q6UW78 93 aa9.25□□□□□ -0.93
CD4-212ENST00000544344 SMIM15Q7Z3B0 74 aa9.24□□□□□ -0.93
CD4-212ENST00000544344 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
CD4-212ENST00000544344 ST20Q9HBF5 79 aa9.24□□□□□ -0.93
CD4-212ENST00000544344 TRBV27A0A0K0K1C4 114 aa9.23□□□□□ -0.93
CD4-212ENST00000544344 C7orf77A4D0Y5 90 aa9.23□□□□□ -0.93
CD4-212ENST00000544344 TEX46H3BTG2 121 aa9.23□□□□□ -0.93
CD4-212ENST00000544344 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
CD4-212ENST00000544344 C5orf38Q86SI9 138 aa9.23□□□□□ -0.93
CD4-212ENST00000544344 OCC1Q8TAD7 63 aa9.23□□□□□ -0.93
CD4-212ENST00000544344 BLOC1S1P78537 153 aa9.22□□□□□ -0.93
CD4-212ENST00000544344 SPAG11BQ08648 103 aa9.22□□□□□ -0.93
CD4-212ENST00000544344 CSDC2Q9Y534 153 aaKnown RBP9.22□□□□□ -0.93
CD4-212ENST00000544344 MRPL35Q9NZE8 188 aaKnown RBP9.21□□□□□ -0.94
CD4-212ENST00000544344 UBE2D4Q9Y2X8 147 aa9.21□□□□□ -0.94
CD4-212ENST00000544344 TRAV13-1A0A0B4J241 112 aa9.2□□□□□ -0.94
CD4-212ENST00000544344 RPL13AP40429 203 aaKnown RBP9.2□□□□□ -0.94
CD4-212ENST00000544344 UBE2D1P51668 147 aa9.2□□□□□ -0.94
CD4-212ENST00000544344 C10orf25Q5T742 122 aa9.2□□□□□ -0.94
CD4-212ENST00000544344 TSKUQ8WUA8 353 aa9.2□□□□□ -0.94
CD4-212ENST00000544344 TLX1NBP0CAT3 122 aa9.19□□□□□ -0.94
CD4-212ENST00000544344 FAM19A5Q7Z5A7 132 aaPredicted RBP9.19□□□□□ -0.94
CD4-212ENST00000544344 Q6ZUT4 128 aa9.18□□□□□ -0.94
CD4-212ENST00000544344 OR10D4PQ8NGN7 298 aa9.18□□□□□ -0.94
CD4-212ENST00000544344 RAB4AP20338 218 aa9.17□□□□□ -0.94
CD4-212ENST00000544344 FAM104AQ969W3 186 aa9.17□□□□□ -0.94
CD4-212ENST00000544344 IMMP2LQ96T52 175 aa9.17□□□□□ -0.94
CD4-212ENST00000544344 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
CD4-212ENST00000544344 C6orf48Q9UBA6 75 aa9.17□□□□□ -0.94
CD4-212ENST00000544344 CARHSP1Q9Y2V2 147 aaKnown RBP9.17□□□□□ -0.94
CD4-212ENST00000544344 F8WDY8 70 aa9.16□□□□□ -0.94
CD4-212ENST00000544344 IGHV3OR16-9A0A0B4J2B5 98 aa9.15□□□□□ -0.94
CD4-212ENST00000544344 A8MWL6 223 aa9.15□□□□□ -0.94
CD4-212ENST00000544344 VCYO14598 125 aa9.15□□□□□ -0.94
CD4-212ENST00000544344 GATCO43716 136 aaKnown RBP9.15□□□□□ -0.94
CD4-212ENST00000544344 TSPAN13O95857 204 aa9.15□□□□□ -0.94
CD4-212ENST00000544344 C10orf91Q5T1B1 145 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms