RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 KRTAP26-1Q6PEX3 210 aa11.8□□□□□ -0.52
TSFM-208ENST00000543727 BAALCQ8WXS3 180 aa11.8□□□□□ -0.52
TSFM-208ENST00000543727 IGLV5-52A0A0A0MRZ9 124 aa11.79□□□□□ -0.52
TSFM-208ENST00000543727 CDK2AP2O75956 126 aa11.79□□□□□ -0.52
TSFM-208ENST00000543727 ZNF664Q8N3J9 261 aa11.79□□□□□ -0.52
TSFM-208ENST00000543727 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
TSFM-208ENST00000543727 UBE2D4Q9Y2X8 147 aa11.79□□□□□ -0.52
TSFM-208ENST00000543727 CCL25O15444 150 aa11.78□□□□□ -0.52
TSFM-208ENST00000543727 WFDC2Q14508 124 aa11.78□□□□□ -0.52
TSFM-208ENST00000543727 Q8N8P6 123 aa11.78□□□□□ -0.52
TSFM-208ENST00000543727 NXT2Q9NPJ8 142 aaKnown RBP11.78□□□□□ -0.52
TSFM-208ENST00000543727 SPANXA1Q9NS26 97 aa11.78□□□□□ -0.52
TSFM-208ENST00000543727 IGLV10-54A0A075B6I4 117 aa11.77□□□□□ -0.53
TSFM-208ENST00000543727 LECT2O14960 151 aa11.76□□□□□ -0.53
TSFM-208ENST00000543727 GCSHP23434 173 aa11.76□□□□□ -0.53
TSFM-208ENST00000543727 G0S2P27469 103 aa11.76□□□□□ -0.53
TSFM-208ENST00000543727 ORMDL2Q53FV1 153 aa11.76□□□□□ -0.53
TSFM-208ENST00000543727 USP17L23D6RBM5 183 aa11.75□□□□□ -0.53
TSFM-208ENST00000543727 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
TSFM-208ENST00000543727 MRPS36P82909 103 aaKnown RBP11.74□□□□□ -0.53
TSFM-208ENST00000543727 SS18Q15532 418 aa11.74□□□□□ -0.53
TSFM-208ENST00000543727 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
TSFM-208ENST00000543727 PYGO1Q9Y3Y4 419 aa11.74□□□□□ -0.53
TSFM-208ENST00000543727 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
TSFM-208ENST00000543727 LOC389332A0A1B0GUA5 103 aa11.73□□□□□ -0.53
TSFM-208ENST00000543727 CFAP161Q6P656 301 aa11.73□□□□□ -0.53
TSFM-208ENST00000543727 MRPL18Q9H0U6 180 aaKnown RBP11.73□□□□□ -0.53
TSFM-208ENST00000543727 C1orf196B1AJZ1 125 aa11.72□□□□□ -0.53
TSFM-208ENST00000543727 NPSP0C0P6 89 aa11.72□□□□□ -0.53
TSFM-208ENST00000543727 IFI27P40305 119 aaPredicted RBP11.72□□□□□ -0.53
TSFM-208ENST00000543727 RPL39P62891 51 aaKnown RBP11.72□□□□□ -0.53
TSFM-208ENST00000543727 DNAH11Q96DT5 4516 aa11.71□□□□□ -0.53
TSFM-208ENST00000543727 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.71□□□□□ -0.53
TSFM-208ENST00000543727 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
TSFM-208ENST00000543727 KIAA1644Q3SXP7 199 aa11.71□□□□□ -0.53
TSFM-208ENST00000543727 ALKBH7Q9BT30 221 aaPredicted RBP11.71□□□□□ -0.53
TSFM-208ENST00000543727 CYSLTR1Q9Y271 337 aa11.71□□□□□ -0.53
TSFM-208ENST00000543727 TGIF2-C20orf24A0A0A6YYL0 155 aa11.7□□□□□ -0.54
TSFM-208ENST00000543727 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
TSFM-208ENST00000543727 FABP9Q0Z7S8 132 aa11.7□□□□□ -0.54
TSFM-208ENST00000543727 CD164L2Q6UWJ8 174 aa11.7□□□□□ -0.54
TSFM-208ENST00000543727 Q6ZUT4 128 aa11.7□□□□□ -0.54
TSFM-208ENST00000543727 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
TSFM-208ENST00000543727 FOXI1Q12951 378 aa11.69□□□□□ -0.54
TSFM-208ENST00000543727 SLC7A5P1Q8MH63 180 aa11.69□□□□□ -0.54
TSFM-208ENST00000543727 SMCO4Q9NRQ5 59 aa11.69□□□□□ -0.54
TSFM-208ENST00000543727 TRAPPC1Q9Y5R8 145 aa11.69□□□□□ -0.54
TSFM-208ENST00000543727 LINC01546A6NGU7 62 aa11.68□□□□□ -0.54
TSFM-208ENST00000543727 PRSS1P07477 247 aa11.68□□□□□ -0.54
TSFM-208ENST00000543727 XCL1P47992 114 aa11.68□□□□□ -0.54
TSFM-208ENST00000543727 KRTAP10-1P60331 282 aa11.68□□□□□ -0.54
TSFM-208ENST00000543727 C2orf66Q6UXQ4 117 aa11.68□□□□□ -0.54
TSFM-208ENST00000543727 PRSS3P2Q8NHM4 247 aa11.68□□□□□ -0.54
TSFM-208ENST00000543727 CNBPP62633 177 aaKnown RBP11.67□□□□□ -0.54
TSFM-208ENST00000543727 TMEM141Q96I45 108 aa11.67□□□□□ -0.54
TSFM-208ENST00000543727 YPEL4Q96NS1 127 aa11.67□□□□□ -0.54
TSFM-208ENST00000543727 AP5S1Q9NUS5 200 aa11.67□□□□□ -0.54
TSFM-208ENST00000543727 hDV102S1A0JD36 115 aa11.66□□□□□ -0.54
TSFM-208ENST00000543727 PAPPA-AS1Q5QFB9 102 aa11.66□□□□□ -0.54
TSFM-208ENST00000543727 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.54
TSFM-208ENST00000543727 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.65□□□□□ -0.54
TSFM-208ENST00000543727 TRAV13-1A0A0B4J241 112 aa11.65□□□□□ -0.54
TSFM-208ENST00000543727 Q6ZN92 141 aa11.65□□□□□ -0.54
TSFM-208ENST00000543727 C15orf56Q8N910 161 aa11.65□□□□□ -0.54
TSFM-208ENST00000543727 FAM104AQ969W3 186 aa11.65□□□□□ -0.54
TSFM-208ENST00000543727 IGLV4-3A0A075B6K6 122 aa11.64□□□□□ -0.55
TSFM-208ENST00000543727 IGHV1-58A0A0C4DH39 117 aa11.64□□□□□ -0.55
TSFM-208ENST00000543727 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
TSFM-208ENST00000543727 IFITM10A6NMD0 228 aa11.63□□□□□ -0.55
TSFM-208ENST00000543727 TEX43Q6ZNM6 134 aa11.63□□□□□ -0.55
TSFM-208ENST00000543727 Q6ZSA8 131 aa11.63□□□□□ -0.55
TSFM-208ENST00000543727 FA2HQ7L5A8 372 aa11.63□□□□□ -0.55
TSFM-208ENST00000543727 C9orf163Q8N9P6 203 aa11.63□□□□□ -0.55
TSFM-208ENST00000543727 TOMM6Q96B49 74 aa11.63□□□□□ -0.55
TSFM-208ENST00000543727 TIMM17AQ99595 171 aa11.63□□□□□ -0.55
TSFM-208ENST00000543727 C2orf88Q9BSF0 95 aa11.63□□□□□ -0.55
TSFM-208ENST00000543727 DYNC1H1Q14204 4646 aaKnown RBP11.63□□□□□ -0.55
TSFM-208ENST00000543727 IGIPA6NJ69 53 aa11.62□□□□□ -0.55
TSFM-208ENST00000543727 COX7A2LO14548 114 aa11.62□□□□□ -0.55
TSFM-208ENST00000543727 CBLN2Q8IUK8 224 aa11.61□□□□□ -0.55
TSFM-208ENST00000543727 APOMO95445 188 aa11.6□□□□□ -0.55
TSFM-208ENST00000543727 MALP21145 153 aa11.6□□□□□ -0.55
TSFM-208ENST00000543727 RAB5BP61020 215 aa11.6□□□□□ -0.55
TSFM-208ENST00000543727 ERASQ7Z444 233 aa11.6□□□□□ -0.55
TSFM-208ENST00000543727 C18orf32Q8TCD1 76 aa11.6□□□□□ -0.55
TSFM-208ENST00000543727 AMELXQ99217 191 aa11.6□□□□□ -0.55
TSFM-208ENST00000543727 OPRPNQ99935 248 aaPredicted RBP11.6□□□□□ -0.55
TSFM-208ENST00000543727 VCX2Q9H322 139 aa11.6□□□□□ -0.55
TSFM-208ENST00000543727 DNAH5Q8TE73 4624 aa11.59□□□□□ -0.55
TSFM-208ENST00000543727 PKIGQ9Y2B9 76 aa11.59□□□□□ -0.55
TSFM-208ENST00000543727 LRP1BQ9NZR2 4599 aa11.58□□□□□ -0.56
TSFM-208ENST00000543727 KIAA1109Q2LD37 5005 aa11.58□□□□□ -0.56
TSFM-208ENST00000543727 IGHV3OR16-9A0A0B4J2B5 98 aa11.58□□□□□ -0.56
TSFM-208ENST00000543727 XGP55808 180 aa11.58□□□□□ -0.56
TSFM-208ENST00000543727 LINC00614P0C842 121 aa11.57□□□□□ -0.56
TSFM-208ENST00000543727 SEC11AP67812 179 aa11.57□□□□□ -0.56
TSFM-208ENST00000543727 FAM19A3Q7Z5A8 133 aa11.57□□□□□ -0.56
TSFM-208ENST00000543727 SCGB3A1Q96QR1 104 aa11.57□□□□□ -0.56
TSFM-208ENST00000543727 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
TSFM-208ENST00000543727 ZNF561-AS1K7EIQ3 104 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms