RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 MRPL18Q9H0U6 180 aaKnown RBP6.55□□□□□ -1.36
VEGFB-204ENST00000543462 MAP1LC3AQ9H492 121 aa6.55□□□□□ -1.36
VEGFB-204ENST00000543462 K7EMI3 77 aa6.54□□□□□ -1.36
VEGFB-204ENST00000543462 FCER1GP30273 86 aa6.54□□□□□ -1.36
VEGFB-204ENST00000543462 RPL39P62891 51 aaKnown RBP6.54□□□□□ -1.36
VEGFB-204ENST00000543462 RMI2Q96E14 147 aa6.54□□□□□ -1.36
VEGFB-204ENST00000543462 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
VEGFB-204ENST00000543462 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
VEGFB-204ENST00000543462 COX11Q9Y6N1 276 aa6.54□□□□□ -1.36
VEGFB-204ENST00000543462 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
VEGFB-204ENST00000543462 CRPP02741 224 aa6.53□□□□□ -1.36
VEGFB-204ENST00000543462 OR5A1Q8NGJ0 315 aa6.53□□□□□ -1.36
VEGFB-204ENST00000543462 C1orf43Q9BWL3 253 aa6.53□□□□□ -1.36
VEGFB-204ENST00000543462 NXT2Q9NPJ8 142 aaKnown RBP6.53□□□□□ -1.36
VEGFB-204ENST00000543462 IGKV2D-24A0A075B6R9 120 aa6.52□□□□□ -1.37
VEGFB-204ENST00000543462 TRAV8-4A0A0B4J246 113 aa6.52□□□□□ -1.37
VEGFB-204ENST00000543462 IFI27P40305 119 aaPredicted RBP6.52□□□□□ -1.37
VEGFB-204ENST00000543462 MRPS36P82909 103 aaKnown RBP6.52□□□□□ -1.37
VEGFB-204ENST00000543462 AMMECR1LQ6DCA0 310 aa6.52□□□□□ -1.37
VEGFB-204ENST00000543462 Q6ZUT4 128 aa6.52□□□□□ -1.37
VEGFB-204ENST00000543462 Q8N814 137 aa6.52□□□□□ -1.37
VEGFB-204ENST00000543462 URB1-AS1Q96HZ7 61 aa6.52□□□□□ -1.37
VEGFB-204ENST00000543462 SPANXA1Q9NS26 97 aa6.52□□□□□ -1.37
VEGFB-204ENST00000543462 KIAA1109Q2LD37 5005 aa6.52□□□□□ -1.37
VEGFB-204ENST00000543462 DNAH8Q96JB1 4490 aa6.51□□□□□ -1.37
VEGFB-204ENST00000543462 LOC389332A0A1B0GUA5 103 aa6.51□□□□□ -1.37
VEGFB-204ENST00000543462 FABP9Q0Z7S8 132 aa6.51□□□□□ -1.37
VEGFB-204ENST00000543462 CDPF1Q6NVV7 123 aa6.51□□□□□ -1.37
VEGFB-204ENST00000543462 RNASEKQ6P5S7 137 aaKnown RBP6.51□□□□□ -1.37
VEGFB-204ENST00000543462 SPATA12Q7Z6I5 190 aa6.51□□□□□ -1.37
VEGFB-204ENST00000543462 ZNF664Q8N3J9 261 aa6.51□□□□□ -1.37
VEGFB-204ENST00000543462 C18orf32Q8TCD1 76 aa6.51□□□□□ -1.37
VEGFB-204ENST00000543462 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
VEGFB-204ENST00000543462 TRAPPC1Q9Y5R8 145 aa6.51□□□□□ -1.37
VEGFB-204ENST00000543462 IGLV10-54A0A075B6I4 117 aa6.5□□□□□ -1.37
VEGFB-204ENST00000543462 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
VEGFB-204ENST00000543462 C5orf52A6NGY3 159 aa6.5□□□□□ -1.37
VEGFB-204ENST00000543462 PSCAO43653 123 aa6.5□□□□□ -1.37
VEGFB-204ENST00000543462 S100A6P06703 90 aa6.5□□□□□ -1.37
VEGFB-204ENST00000543462 LINC00173Q6ZV60 143 aa6.5□□□□□ -1.37
VEGFB-204ENST00000543462 BAALCQ8WXS3 180 aa6.5□□□□□ -1.37
VEGFB-204ENST00000543462 TMEM18Q96B42 140 aa6.5□□□□□ -1.37
VEGFB-204ENST00000543462 IGLV4-3A0A075B6K6 122 aa6.49□□□□□ -1.37
VEGFB-204ENST00000543462 A0A096LNJ9 63 aa6.49□□□□□ -1.37
VEGFB-204ENST00000543462 IGIPA6NJ69 53 aa6.49□□□□□ -1.37
VEGFB-204ENST00000543462 SMAGPQ0VAQ4 97 aa6.49□□□□□ -1.37
VEGFB-204ENST00000543462 FOXI1Q12951 378 aa6.49□□□□□ -1.37
VEGFB-204ENST00000543462 ORMDL2Q53FV1 153 aa6.49□□□□□ -1.37
VEGFB-204ENST00000543462 C2orf66Q6UXQ4 117 aa6.49□□□□□ -1.37
VEGFB-204ENST00000543462 NTN5Q8WTR8 489 aaPredicted RBP6.49□□□□□ -1.37
VEGFB-204ENST00000543462 CHCHD10Q8WYQ3 142 aaPredicted RBP6.49□□□□□ -1.37
VEGFB-204ENST00000543462 TMEM101Q96IK0 257 aa6.49□□□□□ -1.37
VEGFB-204ENST00000543462 HSPG2P98160 4391 aa6.49□□□□□ -1.37
VEGFB-204ENST00000543462 RYR1P21817 5038 aa6.48□□□□□ -1.37
VEGFB-204ENST00000543462 USP17L23D6RBM5 183 aa6.48□□□□□ -1.37
VEGFB-204ENST00000543462 LECT2O14960 151 aa6.48□□□□□ -1.37
VEGFB-204ENST00000543462 NPSP0C0P6 89 aa6.48□□□□□ -1.37
VEGFB-204ENST00000543462 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
VEGFB-204ENST00000543462 RNASE13Q5GAN3 156 aaKnown RBP6.48□□□□□ -1.37
VEGFB-204ENST00000543462 COA6Q5JTJ3 125 aaKnown RBP6.48□□□□□ -1.37
VEGFB-204ENST00000543462 C15orf56Q8N910 161 aa6.48□□□□□ -1.37
VEGFB-204ENST00000543462 TOMM6Q96B49 74 aa6.48□□□□□ -1.37
VEGFB-204ENST00000543462 AMELXQ99217 191 aa6.48□□□□□ -1.37
VEGFB-204ENST00000543462 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
VEGFB-204ENST00000543462 CYSLTR1Q9Y271 337 aa6.48□□□□□ -1.37
VEGFB-204ENST00000543462 HERC2O95714 4834 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 GAGE12HA6NDE8 117 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 EREGO14944 169 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 CCL25O15444 150 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST1H2BKO60814 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST1H2BJP06899 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST1H2BOP23527 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST1H2BBP33778 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST1H2BDP58876 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST1H2BCP62807 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST2H2BEQ16778 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST1H2BHQ93079 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 TIMM17AQ99595 171 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST1H2BNQ99877 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 HIST1H2BMQ99879 126 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 PGPEP1Q9NXJ5 209 aa6.47□□□□□ -1.37
VEGFB-204ENST00000543462 IGKV3OR2-268A0A0C4DH90 116 aa6.46□□□□□ -1.38
VEGFB-204ENST00000543462 C16orf90A8MZG2 172 aa6.46□□□□□ -1.38
VEGFB-204ENST00000543462 TRGC2P03986 189 aa6.46□□□□□ -1.38
VEGFB-204ENST00000543462 PRSS1P07477 247 aa6.46□□□□□ -1.38
VEGFB-204ENST00000543462 DGAT2L7PQ6IED9 249 aa6.46□□□□□ -1.38
VEGFB-204ENST00000543462 CD164L2Q6UWJ8 174 aa6.46□□□□□ -1.38
VEGFB-204ENST00000543462 PRSS3P2Q8NHM4 247 aa6.46□□□□□ -1.38
VEGFB-204ENST00000543462 GVQW2A0A096LPI5 108 aaPredicted RBP6.45□□□□□ -1.38
VEGFB-204ENST00000543462 LINC00310P59036 64 aa6.45□□□□□ -1.38
VEGFB-204ENST00000543462 KRTAP10-1P60331 282 aa6.45□□□□□ -1.38
VEGFB-204ENST00000543462 FAM19A3Q7Z5A8 133 aa6.45□□□□□ -1.38
VEGFB-204ENST00000543462 TMEM141Q96I45 108 aa6.45□□□□□ -1.38
VEGFB-204ENST00000543462 AP5S1Q9NUS5 200 aa6.45□□□□□ -1.38
VEGFB-204ENST00000543462 IGHV3OR16-9A0A0B4J2B5 98 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 SLPIP03973 132 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 LINC00614P0C842 121 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 SMIM6P0DI80 62 aa6.44□□□□□ -1.38
VEGFB-204ENST00000543462 XCL1P47992 114 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms