RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 GATCO43716 136 aaKnown RBP2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 NDUFS6O75380 124 aaKnown RBP2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 SRP19P09132 144 aaKnown RBP2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 TRGC1P0CF51 173 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 TWIST1Q15672 202 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 MIAQ16674 131 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 CLPSL2Q6UWE3 100 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 LINC01551Q86U37 167 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 RPL39LQ96EH5 51 aaKnown RBP2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 PGLYRP4Q96LB8 373 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 FAM210AQ96ND0 272 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 C1orf43Q9BWL3 253 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 BIN3Q9NQY0 253 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 PSORS1C2Q9UIG4 136 aa2.96□□□□□ -1.94
NPIPB3-211ENST00000542953 IGLV10-54A0A075B6I4 117 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 TRBV6-5A0A0K0K1A5 114 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 H7C1H1 209 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 CRPP02741 224 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 CHTF8P0CG12 524 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 KRTAP10-6P60371 365 aaPredicted RBP2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 PKIAP61925 76 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 REG3AQ06141 175 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 PRR4Q16378 134 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 CT83Q5H943 113 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 KCNIP4Q6PIL6 250 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 ZNF664Q8N3J9 261 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 TMEM243Q9BU79 118 aa2.95□□□□□ -1.94
NPIPB3-211ENST00000542953 IGHV3-64A0A075B6Q5 118 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 A8MWL6 223 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 TSHBP01222 138 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 HLA-DQA1P01909 254 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 ESDP10768 282 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 RAB4AP20338 218 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 RPS10P46783 165 aaKnown RBP2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 AMTP48728 403 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 CEBPGP53567 150 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 POLR2KP53803 58 aaKnown RBP2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 COTL1Q14019 142 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 TSKUQ8WUA8 353 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 SMIM7Q9BQ49 75 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 EIF5A2Q9GZV4 153 aaKnown RBP2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 OSTCQ9NRP0 149 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 V9GYV3 84 aa2.94□□□□□ -1.94
NPIPB3-211ENST00000542953 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 TRAV8-4A0A0B4J246 113 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 A0A1B0GUT8 65 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 IGKV2-29A2NJV5 120 aaPredicted RBP2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 SDHAF1A6NFY7 115 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 ZNF727A8MUV8 499 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 HIGD1CA8MV81 97 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 SMKR1H3BMG3 65 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 NCR2O95944 276 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 FGF6P10767 208 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 RPL23P62829 140 aaKnown RBP2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 C15orf56Q8N910 161 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 NRACQ8N912 160 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 CLRN3Q8NCR9 226 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 NUP35Q8NFH5 326 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 ISOC2Q96AB3 205 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 TMEM191AQ9H0A3 160 aa2.93□□□□□ -1.94
NPIPB3-211ENST00000542953 TRBV27A0A0K0K1C4 114 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 GAGE12HA6NDE8 117 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 H7C423 109 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 I3L3M4 83 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 FOXI1Q12951 378 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 TMEM241Q24JQ0 296 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 TEX261Q6UWH6 196 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 Q6ZRP5 223 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 AMN1Q8IY45 258 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 CHCHD10Q8WYQ3 142 aaPredicted RBP2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 FAM104AQ969W3 186 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 DPH3Q96FX2 82 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 TMEM242Q9NWH2 141 aa2.92□□□□□ -1.94
NPIPB3-211ENST00000542953 GVQW2A0A096LPI5 108 aaPredicted RBP2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 IGKV3OR2-268A0A0C4DH90 116 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 LINC00959A0A1B0GUT2 108 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 SMIM27A0A1W2PRY6 76 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 hDV102S1A0JD36 115 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 UBE2L6O14933 153 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 APCSP02743 223 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 PMCHP20382 165 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 LINC01547P58512 204 aaPredicted RBP2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 FAM74A3Q4VXF1 159 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 FAM104BQ5XKR9 115 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 SMIM15Q7Z3B0 74 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 MRPL52Q86TS9 123 aaKnown RBP2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 PRR26Q8N8Z3 221 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 OR5A1Q8NGJ0 315 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 MRAP2Q96G30 205 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 ST20Q9HBF5 79 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 CDC42SE2Q9NRR3 84 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 NAT8Q9UHE5 227 aa2.91□□□□□ -1.94
NPIPB3-211ENST00000542953 A0A1B0GXF2 115 aa2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 VCYO14598 125 aa2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 CCL25O15444 150 aa2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 ZNF25P17030 456 aaPredicted RBP2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 RIGQ13278 110 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms