RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 ESDP10768 282 aa5.8□□□□□ -1.48
CLSTN3-212ENST00000541770 SERTAD4-AS1Q5TG53 156 aa5.8□□□□□ -1.48
CLSTN3-212ENST00000541770 Q8N3U1 123 aa5.8□□□□□ -1.48
CLSTN3-212ENST00000541770 SMIM2Q9BVW6 85 aa5.8□□□□□ -1.48
CLSTN3-212ENST00000541770 TRAPPC1Q9Y5R8 145 aa5.8□□□□□ -1.48
CLSTN3-212ENST00000541770 KRTAP29-1A8MX34 341 aaPredicted RBP5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 UBE2L6O14933 153 aa5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 TRGC2P03986 189 aa5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 FABP9Q0Z7S8 132 aa5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 GAGE6Q13070 117 aa5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 MPV17L2Q567V2 206 aa5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 DEFB104AQ8WTQ1 72 aa5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 MRPL18Q9H0U6 180 aaKnown RBP5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 MAP1LC3AQ9H492 121 aa5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
CLSTN3-212ENST00000541770 TRAV8-3A0A0A6YYJ7 113 aa5.78□□□□□ -1.48
CLSTN3-212ENST00000541770 FCER1GP30273 86 aa5.78□□□□□ -1.48
CLSTN3-212ENST00000541770 RBX1P62877 108 aa5.78□□□□□ -1.48
CLSTN3-212ENST00000541770 Q0VG73 95 aa5.78□□□□□ -1.48
CLSTN3-212ENST00000541770 KIAA1644Q3SXP7 199 aa5.78□□□□□ -1.48
CLSTN3-212ENST00000541770 LINC00528Q8N1L1 170 aa5.78□□□□□ -1.48
CLSTN3-212ENST00000541770 FAM30AQ9NZY2 134 aa5.78□□□□□ -1.48
CLSTN3-212ENST00000541770 KLK12Q9UKR0 248 aa5.78□□□□□ -1.48
CLSTN3-212ENST00000541770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 IGKV2-29A2NJV5 120 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 K7EMI3 77 aa5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 ANGP03950 147 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 ZNF25P17030 456 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 MRPL52Q86TS9 123 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 Q8N8P6 123 aa5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 Q8N976 141 aa5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 C20orf203Q8NBC4 194 aa5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 TMEM18Q96B42 140 aa5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 ALKBH7Q9BT30 221 aaPredicted RBP5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 NXT2Q9NPJ8 142 aaKnown RBP5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 PRR34Q9NV39 138 aa5.77□□□□□ -1.49
CLSTN3-212ENST00000541770 SRRM2Q9UQ35 2752 aaKnown RBP5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 IGLV4-60A0A075B6I1 120 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 S100A6P06703 90 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 FGF6P10767 208 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 SMAGPQ0VAQ4 97 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 AMMECR1LQ6DCA0 310 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 ENHOQ6UWT2 76 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 NTN5Q8WTR8 489 aaPredicted RBP5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 UBE2WQ96B02 151 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 RMI2Q96E14 147 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 TM2D2Q9BX73 214 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 CSDC2Q9Y534 153 aaKnown RBP5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 COX11Q9Y6N1 276 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 VPS13BQ7Z7G8 4022 aa5.76□□□□□ -1.49
CLSTN3-212ENST00000541770 LOC389332A0A1B0GUA5 103 aa5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 CRPP02741 224 aa5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 MIAQ16674 131 aa5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 RNASEKQ6P5S7 137 aaKnown RBP5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 LINC00269Q8N2A0 174 aa5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 Q8N814 137 aa5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 TMEM101Q96IK0 257 aa5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 TIMM21Q9BVV7 248 aa5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 Q9HAA7 133 aa5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
CLSTN3-212ENST00000541770 LRCOL1A6NCL2 159 aa5.74□□□□□ -1.49
CLSTN3-212ENST00000541770 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
CLSTN3-212ENST00000541770 IFI27P40305 119 aaPredicted RBP5.74□□□□□ -1.49
CLSTN3-212ENST00000541770 REG3AQ06141 175 aa5.74□□□□□ -1.49
CLSTN3-212ENST00000541770 ORMDL2Q53FV1 153 aa5.74□□□□□ -1.49
CLSTN3-212ENST00000541770 IGKV2D-24A0A075B6R9 120 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 TRAV8-4A0A0B4J246 113 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST1H2BKO60814 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST1H2BJP06899 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST1H2BOP23527 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 G0S2P27469 103 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST1H2BBP33778 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 NDUFA6P56556 154 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST1H2BDP58876 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST1H2BCP62807 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST2H2BEQ16778 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 OR5A1Q8NGJ0 315 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 PRSS3P2Q8NHM4 247 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST1H2BHQ93079 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST1H2BNQ99877 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 HIST1H2BMQ99879 126 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 C1orf43Q9BWL3 253 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 CDC42SE2Q9NRR3 84 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 SPANXA1Q9NS26 97 aa5.73□□□□□ -1.49
CLSTN3-212ENST00000541770 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.72□□□□□ -1.49
CLSTN3-212ENST00000541770 RPL39P62891 51 aaKnown RBP5.72□□□□□ -1.49
CLSTN3-212ENST00000541770 DGAT2L7PQ6IED9 249 aa5.72□□□□□ -1.49
CLSTN3-212ENST00000541770 CLPSL2Q6UWE3 100 aa5.72□□□□□ -1.49
CLSTN3-212ENST00000541770 BAGE3Q86Y29 109 aa5.72□□□□□ -1.49
CLSTN3-212ENST00000541770 ZNF664Q8N3J9 261 aa5.72□□□□□ -1.49
CLSTN3-212ENST00000541770 C18orf32Q8TCD1 76 aa5.72□□□□□ -1.49
CLSTN3-212ENST00000541770 CYSLTR1Q9Y271 337 aa5.72□□□□□ -1.49
CLSTN3-212ENST00000541770 PYGO1Q9Y3Y4 419 aa5.72□□□□□ -1.49
CLSTN3-212ENST00000541770 LINC01549A6NIU2 74 aa5.71□□□□□ -1.5
CLSTN3-212ENST00000541770 NPSP0C0P6 89 aa5.71□□□□□ -1.5
CLSTN3-212ENST00000541770 MRPS36P82909 103 aaKnown RBP5.71□□□□□ -1.5
CLSTN3-212ENST00000541770 KRTAP26-1Q6PEX3 210 aa5.71□□□□□ -1.5
CLSTN3-212ENST00000541770 C2orf66Q6UXQ4 117 aa5.71□□□□□ -1.5
CLSTN3-212ENST00000541770 FA2HQ7L5A8 372 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms