RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 SCXQ7RTU7 201 aa11.14□□□□□ -0.63
CACNA2D4-211ENST00000540728 TMEM101Q96IK0 257 aa11.14□□□□□ -0.63
CACNA2D4-211ENST00000540728 AP5S1Q9NUS5 200 aa11.14□□□□□ -0.63
CACNA2D4-211ENST00000540728 VPS13BQ7Z7G8 4022 aa11.13□□□□□ -0.63
CACNA2D4-211ENST00000540728 HERC1Q15751 4861 aa11.13□□□□□ -0.63
CACNA2D4-211ENST00000540728 hDV102S1A0JD36 115 aa11.13□□□□□ -0.63
CACNA2D4-211ENST00000540728 GAS8-AS1O95177 125 aa11.13□□□□□ -0.63
CACNA2D4-211ENST00000540728 ZNF25P17030 456 aaPredicted RBP11.13□□□□□ -0.63
CACNA2D4-211ENST00000540728 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
CACNA2D4-211ENST00000540728 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
CACNA2D4-211ENST00000540728 POLR2KP53803 58 aaKnown RBP11.12□□□□□ -0.63
CACNA2D4-211ENST00000540728 CFAP161Q6P656 301 aa11.12□□□□□ -0.63
CACNA2D4-211ENST00000540728 C9orf163Q8N9P6 203 aa11.12□□□□□ -0.63
CACNA2D4-211ENST00000540728 TMEM242Q9NWH2 141 aa11.12□□□□□ -0.63
CACNA2D4-211ENST00000540728 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
CACNA2D4-211ENST00000540728 GAGE12HA6NDE8 117 aa11.11□□□□□ -0.63
CACNA2D4-211ENST00000540728 VCYO14598 125 aa11.11□□□□□ -0.63
CACNA2D4-211ENST00000540728 TSHBP01222 138 aa11.11□□□□□ -0.63
CACNA2D4-211ENST00000540728 RPS10P46783 165 aaKnown RBP11.11□□□□□ -0.63
CACNA2D4-211ENST00000540728 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
CACNA2D4-211ENST00000540728 DNAH8Q96JB1 4490 aa11.1□□□□□ -0.63
CACNA2D4-211ENST00000540728 TRAV9-1A0A075B6T8 112 aa11.1□□□□□ -0.63
CACNA2D4-211ENST00000540728 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
CACNA2D4-211ENST00000540728 ESDP10768 282 aa11.1□□□□□ -0.63
CACNA2D4-211ENST00000540728 FCER1GP30273 86 aa11.1□□□□□ -0.63
CACNA2D4-211ENST00000540728 OR5A1Q8NGJ0 315 aa11.1□□□□□ -0.63
CACNA2D4-211ENST00000540728 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.09□□□□□ -0.63
CACNA2D4-211ENST00000540728 CKS2P33552 79 aa11.09□□□□□ -0.63
CACNA2D4-211ENST00000540728 CNBPP62633 177 aaKnown RBP11.09□□□□□ -0.63
CACNA2D4-211ENST00000540728 MRPL51Q4U2R6 128 aaKnown RBP11.09□□□□□ -0.63
CACNA2D4-211ENST00000540728 CIRBP-AS1Q8TBR5 109 aa11.09□□□□□ -0.63
CACNA2D4-211ENST00000540728 CHCHD10Q8WYQ3 142 aaPredicted RBP11.09□□□□□ -0.63
CACNA2D4-211ENST00000540728 SUMO2P61956 95 aaKnown RBP11.08□□□□□ -0.64
CACNA2D4-211ENST00000540728 SMAGPQ0VAQ4 97 aa11.08□□□□□ -0.64
CACNA2D4-211ENST00000540728 KIR2DL4Q99706 377 aa11.08□□□□□ -0.64
CACNA2D4-211ENST00000540728 D6R8Y8 96 aa11.06□□□□□ -0.64
CACNA2D4-211ENST00000540728 MRPL52Q86TS9 123 aaKnown RBP11.06□□□□□ -0.64
CACNA2D4-211ENST00000540728 NRACQ8N912 160 aa11.06□□□□□ -0.64
CACNA2D4-211ENST00000540728 IGHV3-64A0A075B6Q5 118 aa11.05□□□□□ -0.64
CACNA2D4-211ENST00000540728 PPBPP02775 128 aa11.05□□□□□ -0.64
CACNA2D4-211ENST00000540728 SS18Q15532 418 aa11.05□□□□□ -0.64
CACNA2D4-211ENST00000540728 SDIM1Q6ZPB5 146 aa11.05□□□□□ -0.64
CACNA2D4-211ENST00000540728 LINC00959A0A1B0GUT2 108 aa11.04□□□□□ -0.64
CACNA2D4-211ENST00000540728 J3QL48 77 aa11.04□□□□□ -0.64
CACNA2D4-211ENST00000540728 XCL1P47992 114 aa11.04□□□□□ -0.64
CACNA2D4-211ENST00000540728 ORMDL3Q8N138 153 aa11.04□□□□□ -0.64
CACNA2D4-211ENST00000540728 ZNF664Q8N3J9 261 aa11.04□□□□□ -0.64
CACNA2D4-211ENST00000540728 C15orf56Q8N910 161 aa11.04□□□□□ -0.64
CACNA2D4-211ENST00000540728 TMEM18Q96B42 140 aa11.04□□□□□ -0.64
CACNA2D4-211ENST00000540728 C20orf78Q9BR46 151 aa11.04□□□□□ -0.64
CACNA2D4-211ENST00000540728 CDC42SE2Q9NRR3 84 aa11.04□□□□□ -0.64
CACNA2D4-211ENST00000540728 TCAPO15273 167 aa11.03□□□□□ -0.64
CACNA2D4-211ENST00000540728 COX19Q49B96 90 aa11.03□□□□□ -0.64
CACNA2D4-211ENST00000540728 TMEM136Q6ZRR5 245 aa11.03□□□□□ -0.64
CACNA2D4-211ENST00000540728 TRBV24-1A0A075B6N3 115 aa11.02□□□□□ -0.65
CACNA2D4-211ENST00000540728 CCL25O15444 150 aa11.02□□□□□ -0.65
CACNA2D4-211ENST00000540728 TNFRSF6BO95407 300 aa11.02□□□□□ -0.65
CACNA2D4-211ENST00000540728 HIGD2BQ4VC39 106 aa11.02□□□□□ -0.65
CACNA2D4-211ENST00000540728 DPH3Q96FX2 82 aa11.02□□□□□ -0.65
CACNA2D4-211ENST00000540728 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
CACNA2D4-211ENST00000540728 SLPIP03973 132 aa11.01□□□□□ -0.65
CACNA2D4-211ENST00000540728 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
CACNA2D4-211ENST00000540728 FOXI1Q12951 378 aa11.01□□□□□ -0.65
CACNA2D4-211ENST00000540728 CSDC2Q9Y534 153 aaKnown RBP11.01□□□□□ -0.65
CACNA2D4-211ENST00000540728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.01□□□□□ -0.65
CACNA2D4-211ENST00000540728 TGIF2-C20orf24A0A0A6YYL0 155 aa11□□□□□ -0.65
CACNA2D4-211ENST00000540728 GNB1LQ9BYB4 327 aa11□□□□□ -0.65
CACNA2D4-211ENST00000540728 GVQW2A0A096LPI5 108 aaPredicted RBP10.99□□□□□ -0.65
CACNA2D4-211ENST00000540728 IGHV1-58A0A0C4DH39 117 aa10.99□□□□□ -0.65
CACNA2D4-211ENST00000540728 PHOX2AO14813 284 aa10.99□□□□□ -0.65
CACNA2D4-211ENST00000540728 NPYP01303 97 aa10.99□□□□□ -0.65
CACNA2D4-211ENST00000540728 MT-ND6P03923 174 aa10.99□□□□□ -0.65
CACNA2D4-211ENST00000540728 CD164L2Q6UWJ8 174 aa10.99□□□□□ -0.65
CACNA2D4-211ENST00000540728 UBE2D4Q9Y2X8 147 aa10.99□□□□□ -0.65
CACNA2D4-211ENST00000540728 C1orf196B1AJZ1 125 aa10.98□□□□□ -0.65
CACNA2D4-211ENST00000540728 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
CACNA2D4-211ENST00000540728 SMIM2Q9BVW6 85 aa10.98□□□□□ -0.65
CACNA2D4-211ENST00000540728 MAP1LC3AQ9H492 121 aa10.98□□□□□ -0.65
CACNA2D4-211ENST00000540728 SMCO4Q9NRQ5 59 aa10.98□□□□□ -0.65
CACNA2D4-211ENST00000540728 LAMTOR2Q9Y2Q5 125 aa10.98□□□□□ -0.65
CACNA2D4-211ENST00000540728 PANO1I0J062 215 aa10.97□□□□□ -0.65
CACNA2D4-211ENST00000540728 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
CACNA2D4-211ENST00000540728 CIRBPQ14011 172 aaKnown RBP10.97□□□□□ -0.65
CACNA2D4-211ENST00000540728 CBLN2Q8IUK8 224 aa10.97□□□□□ -0.65
CACNA2D4-211ENST00000540728 MRPL18Q9H0U6 180 aaKnown RBP10.97□□□□□ -0.65
CACNA2D4-211ENST00000540728 LOC389332A0A1B0GUA5 103 aa10.96□□□□□ -0.65
CACNA2D4-211ENST00000540728 FABP9Q0Z7S8 132 aa10.96□□□□□ -0.65
CACNA2D4-211ENST00000540728 KIAA1644Q3SXP7 199 aa10.96□□□□□ -0.65
CACNA2D4-211ENST00000540728 PKIGQ9Y2B9 76 aa10.96□□□□□ -0.65
CACNA2D4-211ENST00000540728 ZNF561-AS1K7EIQ3 104 aa10.95□□□□□ -0.66
CACNA2D4-211ENST00000540728 RAB5AP20339 215 aa10.95□□□□□ -0.66
CACNA2D4-211ENST00000540728 MALP21145 153 aa10.95□□□□□ -0.66
CACNA2D4-211ENST00000540728 COX6A2Q02221 97 aa10.95□□□□□ -0.66
CACNA2D4-211ENST00000540728 TRAPPC1Q9Y5R8 145 aa10.95□□□□□ -0.66
CACNA2D4-211ENST00000540728 TRAV13-1A0A0B4J241 112 aa10.94□□□□□ -0.66
CACNA2D4-211ENST00000540728 CHTF8P0CG12 524 aa10.94□□□□□ -0.66
CACNA2D4-211ENST00000540728 RNASE13Q5GAN3 156 aaKnown RBP10.94□□□□□ -0.66
CACNA2D4-211ENST00000540728 Q6ZUT4 128 aa10.94□□□□□ -0.66
CACNA2D4-211ENST00000540728 A0A087WYN8 130 aa10.93□□□□□ -0.66
CACNA2D4-211ENST00000540728 COX7A2LO14548 114 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms