RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ZNF609O15014 1411 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 C10orf71Q711Q0 1435 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 NCOA3Q9Y6Q9 1424 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 PZPP20742 1482 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 LAMC3Q9Y6N6 1575 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 IFT172Q9UG01 1749 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 ASH1LQ9NR48 2969 aaKnown RBP0.27□□□□□ -2.37
MDM2-227ENST00000540709 PATJQ8NI35 1801 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 DOCK2Q92608 1830 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 DOCK1Q14185 1865 aa0.27□□□□□ -2.37
MDM2-227ENST00000540709 F5P12259 2224 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 hADV29S1A0JD25 119 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 PRH1P02810 166 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 Q5BKY6 102 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 FAM223AQ8IWN6 122 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 AMELXQ99217 191 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 SMR3AQ99954 134 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 ERCC6L2Q5T890 1561 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 ROBO1Q9Y6N7 1651 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 PRDM2Q13029 1718 aa0.26□□□□□ -2.37
MDM2-227ENST00000540709 MAP2P11137 1827 aaKnown RBP0.26□□□□□ -2.37
MDM2-227ENST00000540709 PI4KAP42356 2102 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 PSME4Q14997 1843 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 CUL7Q14999 1698 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 MAPKBP1O60336 1514 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 FAM135AQ9P2D6 1515 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 BCL9LQ86UU0 1499 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 PXDNQ92626 1479 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 SHANK2Q9UPX8 1470 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 A0A0G2JND7 137 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 M0R143 59 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 LINC00032P0C843 101 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 FAUP35544 74 aaKnown RBP0.25□□□□□ -2.37
MDM2-227ENST00000540709 COL5A1-AS1Q5SY13 56 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 NCMAPQ5T1S8 102 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 ACBD7Q8N6N7 88 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 TMEM263Q8WUH6 116 aaKnown RBP0.25□□□□□ -2.37
MDM2-227ENST00000540709 FAM167A-AS1Q96KT0 104 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 PMCHL2Q9BQD1 86 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 CNFNQ9BYD5 112 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 CDC42SE2Q9NRR3 84 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 USP24Q9UPU5 2620 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 ZNF462Q96JM2 2506 aa0.25□□□□□ -2.37
MDM2-227ENST00000540709 ZNF236Q9UL36 1845 aa0.24□□□□□ -2.37
MDM2-227ENST00000540709 KDM5AP29375 1690 aaKnown RBP0.24□□□□□ -2.37
MDM2-227ENST00000540709 NRKQ7Z2Y5 1582 aa0.24□□□□□ -2.37
MDM2-227ENST00000540709 FAM223BA6NKX1 122 aa0.24□□□□□ -2.37
MDM2-227ENST00000540709 NDUFC1O43677 76 aa0.24□□□□□ -2.37
MDM2-227ENST00000540709 PMCHL1Q16048 86 aa0.24□□□□□ -2.37
MDM2-227ENST00000540709 PIGYQ3MUY2 71 aa0.24□□□□□ -2.37
MDM2-227ENST00000540709 PRO1933Q9H354 126 aa0.24□□□□□ -2.37
MDM2-227ENST00000540709 LINC00472Q9H8W2 130 aa0.24□□□□□ -2.37
MDM2-227ENST00000540709 SIPA1L3O60292 1781 aaPredicted RBP0.24□□□□□ -2.37
MDM2-227ENST00000540709 QRICH2Q9H0J4 1663 aa0.24□□□□□ -2.37
MDM2-227ENST00000540709 TNCP24821 2201 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 MYO7AQ13402 2215 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 UNC13BO14795 1591 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 ARHGAP5Q13017 1502 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 POLA1P09884 1462 aaPredicted RBP0.23□□□□□ -2.37
MDM2-227ENST00000540709 TCHHQ07283 1943 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 TRBV6-1A0A0K0K1D8 114 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 C7orf77A4D0Y5 90 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 MPC2O95563 127 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 MT-ATP8P03928 68 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 UQCRHP07919 91 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 KRTAP2-3P0C7H8 128 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 SAA2P0DJI9 122 aaPredicted RBP0.23□□□□□ -2.37
MDM2-227ENST00000540709 ASIPP42127 132 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 UBE2D3P61077 147 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 UBE2D2P62837 147 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 C10orf113Q5VZT2 155 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 Q8IZM0 81 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 KRTAP2-4Q9BYR9 128 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 KRTAP2-1Q9BYU5 128 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 DPY30Q9C005 99 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 TP53AIP1Q9HCN2 124 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 CACFD1Q9UGQ2 172 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 CADP27708 2225 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 KIF21AQ7Z4S6 1674 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 PEG3Q9GZU2 1588 aa0.23□□□□□ -2.37
MDM2-227ENST00000540709 CNTLNQ9NXG0 1405 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 ATOX1O00244 68 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 S100A8P05109 93 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 GNGT1P63211 74 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 PSMG4Q5JS54 123 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 LCN9Q8WX39 176 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 LINC01600Q96MT4 127 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 Q9H521 79 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 LRP6O75581 1613 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 MEGF8Q7Z7M0 2845 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 WNK3Q9BYP7 1800 aa0.22□□□□□ -2.37
MDM2-227ENST00000540709 ABCC5O15440 1437 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 LRRC37A2A6NM11 1700 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 RIMS1Q86UR5 1692 aaKnown RBP0.21□□□□□ -2.38
MDM2-227ENST00000540709 A0A087WVE0 104 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 UQCRHLA0A096LP55 91 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 C10orf142B7Z368 130 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 PKIAP61925 76 aa0.21□□□□□ -2.38
MDM2-227ENST00000540709 DEFB109BQ30KR1 87 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms