RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 UBE2D2P62837 147 aa8.46□□□□□ -1.06
CYB561A3-215ENST00000540317 MRPS36P82909 103 aaKnown RBP8.46□□□□□ -1.06
CYB561A3-215ENST00000540317 TAL2Q16559 108 aa8.46□□□□□ -1.06
CYB561A3-215ENST00000540317 SLC25A29Q8N8R3 303 aa8.46□□□□□ -1.06
CYB561A3-215ENST00000540317 GTSF1LQ9H1H1 148 aa8.46□□□□□ -1.06
CYB561A3-215ENST00000540317 TRGV4A0A0C4DH28 118 aa8.45□□□□□ -1.06
CYB561A3-215ENST00000540317 LINC00612Q8N6U2 182 aa8.45□□□□□ -1.06
CYB561A3-215ENST00000540317 ORAOV1Q8WV07 137 aa8.45□□□□□ -1.06
CYB561A3-215ENST00000540317 PHLDA1Q8WV24 401 aaPredicted RBP8.45□□□□□ -1.06
CYB561A3-215ENST00000540317 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
CYB561A3-215ENST00000540317 Q9UF83 564 aa8.45□□□□□ -1.06
CYB561A3-215ENST00000540317 UBE2D4Q9Y2X8 147 aa8.45□□□□□ -1.06
CYB561A3-215ENST00000540317 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
CYB561A3-215ENST00000540317 CSDC2Q9Y534 153 aaKnown RBP8.44□□□□□ -1.06
CYB561A3-215ENST00000540317 IGHV3-38A0A0C4DH36 116 aa8.44□□□□□ -1.06
CYB561A3-215ENST00000540317 LYRM9A8MSI8 78 aa8.44□□□□□ -1.06
CYB561A3-215ENST00000540317 OPRPNQ99935 248 aaPredicted RBP8.44□□□□□ -1.06
CYB561A3-215ENST00000540317 CHAC1Q9BUX1 264 aa8.44□□□□□ -1.06
CYB561A3-215ENST00000540317 COX11Q9Y6N1 276 aa8.44□□□□□ -1.06
CYB561A3-215ENST00000540317 X6R8D5 127 aa8.44□□□□□ -1.06
CYB561A3-215ENST00000540317 TENM2Q9NT68 2774 aa8.43□□□□□ -1.06
CYB561A3-215ENST00000540317 H7C423 109 aa8.43□□□□□ -1.06
CYB561A3-215ENST00000540317 DEFB135Q30KP9 77 aa8.43□□□□□ -1.06
CYB561A3-215ENST00000540317 MAPKAPK5-AS1Q8N8E1 139 aa8.43□□□□□ -1.06
CYB561A3-215ENST00000540317 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 TINCRA0A1B0GVN0 87 aa8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 IGKV2-29A2NJV5 120 aaPredicted RBP8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 GAGE12JA6NER3 117 aa8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 ZNF25P17030 456 aaPredicted RBP8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 GAGE1Q13065 139 aa8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 GAGE4Q13068 117 aa8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 GAGE5Q13069 117 aa8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 FHL2Q14192 279 aa8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 GAGE13Q4V321 117 aa8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 DNAH7Q8WXX0 4024 aa8.42□□□□□ -1.06
CYB561A3-215ENST00000540317 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
CYB561A3-215ENST00000540317 ZNF815PA8K554 130 aa8.41□□□□□ -1.06
CYB561A3-215ENST00000540317 LEPROTO15243 131 aa8.41□□□□□ -1.06
CYB561A3-215ENST00000540317 EMP1P54849 157 aa8.41□□□□□ -1.06
CYB561A3-215ENST00000540317 PLEKHB2Q96CS7 222 aa8.41□□□□□ -1.06
CYB561A3-215ENST00000540317 TTTY13Q9BZ97 58 aa8.41□□□□□ -1.06
CYB561A3-215ENST00000540317 A0A0J9YXV3 536 aa8.4□□□□□ -1.06
CYB561A3-215ENST00000540317 MIFP14174 115 aa8.4□□□□□ -1.06
CYB561A3-215ENST00000540317 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.06
CYB561A3-215ENST00000540317 CEND1Q8N111 149 aa8.4□□□□□ -1.06
CYB561A3-215ENST00000540317 FAM104AQ969W3 186 aa8.4□□□□□ -1.06
CYB561A3-215ENST00000540317 TMEM243Q9BU79 118 aa8.4□□□□□ -1.06
CYB561A3-215ENST00000540317 TM2D2Q9BX73 214 aa8.4□□□□□ -1.06
CYB561A3-215ENST00000540317 CSMD3Q7Z407 3707 aa8.4□□□□□ -1.07
CYB561A3-215ENST00000540317 A0A0J9YWU9 116 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 H3BRM9 83 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 TAX1BP3O14907 124 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 DEFB130BP0DP73 79 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 DEFB130AP0DP74 79 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 LGALS3P17931 250 aaKnown RBP8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 RNF183Q96D59 192 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 LCE6AA0A183 80 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 J3QQQ9 107 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 UBE2L6O14933 153 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 LINC00694P0DN24 101 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 TIRAPP58753 221 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 CEMP1Q6PRD7 247 aaPredicted RBP8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 SCGB1D4Q6XE38 83 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 NTM-AS1Q6ZSK4 140 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 TMEM101Q96IK0 257 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 HIST1H4GQ99525 98 aa8.39□□□□□ -1.07
CYB561A3-215ENST00000540317 GCSHP23434 173 aa8.38□□□□□ -1.07
CYB561A3-215ENST00000540317 UBE2D1P51668 147 aa8.38□□□□□ -1.07
CYB561A3-215ENST00000540317 Q6ZUT4 128 aa8.38□□□□□ -1.07
CYB561A3-215ENST00000540317 FAM19A3Q7Z5A8 133 aa8.38□□□□□ -1.07
CYB561A3-215ENST00000540317 GEMIN7Q9H840 131 aaKnown RBP8.38□□□□□ -1.07
CYB561A3-215ENST00000540317 PRO0255Q9UI72 69 aa8.38□□□□□ -1.07
CYB561A3-215ENST00000540317 PTTG1IPP53801 180 aa8.37□□□□□ -1.07
CYB561A3-215ENST00000540317 FAM222AQ5U5X8 452 aa8.37□□□□□ -1.07
CYB561A3-215ENST00000540317 AMMECR1LQ6DCA0 310 aa8.37□□□□□ -1.07
CYB561A3-215ENST00000540317 OR5A1Q8NGJ0 315 aa8.37□□□□□ -1.07
CYB561A3-215ENST00000540317 TEX48A0A1B0GUV7 120 aa8.36□□□□□ -1.07
CYB561A3-215ENST00000540317 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
CYB561A3-215ENST00000540317 HERVK_113P63121 156 aa8.36□□□□□ -1.07
CYB561A3-215ENST00000540317 TRBV6-8A0A0A6YYG3 113 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 IGHV4-28A0A0C4DH34 117 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 LOC100131303A0A0U1RQF7 123 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 LINC00469Q8N7U9 141 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 SPANXB1Q9NS25 103 aaPredicted RBP8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 IGLV5-45A0A087WSX0 123 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 IGHV1-58A0A0C4DH39 117 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 TMEM238LA0A1B0GVL6 79 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 C9orf118A6NHY6 69 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 A6NJY4 79 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 SPART-AS1P0CW21 52 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 DAD1P61803 113 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 Q8NAQ8 132 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 ATP6V0E2Q8NHE4 81 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 CDC42SE2Q9NRR3 84 aa8.35□□□□□ -1.07
CYB561A3-215ENST00000540317 A0A0J9YY99 117 aa8.34□□□□□ -1.07
CYB561A3-215ENST00000540317 FXYD2P54710 66 aa8.34□□□□□ -1.07
CYB561A3-215ENST00000540317 SRSF9Q13242 221 aaKnown RBP eCLIP8.34□□□□□ -1.07
CYB561A3-215ENST00000540317 VAMP3Q15836 100 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms