RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 WIPF1O43516 503 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 PSMG3-AS1Q96PY0 264 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 C3orf84H3BNL1 204 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 TRBV10-1A0A0K0K1A3 114 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 DEFB130BP0DP73 79 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 DEFB130AP0DP74 79 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 ZNF843Q8N446 348 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 BPESC1Q9GZL8 116 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 A8MTW9 85 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 NREPQ16612 68 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 DEFB136Q30KP8 78 aa8.1□□□□□ -1.11
PBX1-212ENST00000540236 JMJD7-PLA2G4BH0Y9G9 81 aa8.09□□□□□ -1.11
PBX1-212ENST00000540236 IGLV1-47P01700 117 aa8.09□□□□□ -1.11
PBX1-212ENST00000540236 LINC00482Q8N8I6 264 aa8.09□□□□□ -1.11
PBX1-212ENST00000540236 NOP10Q9NPE3 64 aaKnown RBP8.09□□□□□ -1.11
PBX1-212ENST00000540236 UBE2D4Q9Y2X8 147 aa8.09□□□□□ -1.11
PBX1-212ENST00000540236 CEP290O15078 2479 aa8.09□□□□□ -1.11
PBX1-212ENST00000540236 LTBP2Q14767 1821 aa8.09□□□□□ -1.11
PBX1-212ENST00000540236 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.12
PBX1-212ENST00000540236 Q8N9W7 124 aa8.09□□□□□ -1.12
PBX1-212ENST00000540236 NDUFA4O00483 81 aa8.08□□□□□ -1.12
PBX1-212ENST00000540236 CADP27708 2225 aa8.08□□□□□ -1.12
PBX1-212ENST00000540236 BPY2O14599 106 aa8.08□□□□□ -1.12
PBX1-212ENST00000540236 A0A0J9YX75 114 aa8.07□□□□□ -1.12
PBX1-212ENST00000540236 AMELXQ99217 191 aa8.07□□□□□ -1.12
PBX1-212ENST00000540236 FAM215AQ9Y5M1 114 aa8.07□□□□□ -1.12
PBX1-212ENST00000540236 PLCE1Q9P212 2302 aa8.07□□□□□ -1.12
PBX1-212ENST00000540236 SEM1Q6ZVN7 128 aa8.07□□□□□ -1.12
PBX1-212ENST00000540236 GRNP28799 593 aaKnown RBP8.06□□□□□ -1.12
PBX1-212ENST00000540236 RNF223E7ERA6 249 aa8.06□□□□□ -1.12
PBX1-212ENST00000540236 F8W735 103 aaPredicted RBP8.06□□□□□ -1.12
PBX1-212ENST00000540236 HIGD2AQ9BW72 106 aa8.06□□□□□ -1.12
PBX1-212ENST00000540236 TPRP12270 2363 aaKnown RBP8.06□□□□□ -1.12
PBX1-212ENST00000540236 MRPS36P82909 103 aaKnown RBP8.05□□□□□ -1.12
PBX1-212ENST00000540236 Q8N3U1 123 aa8.05□□□□□ -1.12
PBX1-212ENST00000540236 DKK4Q9UBT3 224 aa8.05□□□□□ -1.12
PBX1-212ENST00000540236 Q6ZSN1 163 aa8.05□□□□□ -1.12
PBX1-212ENST00000540236 ESM1Q9NQ30 184 aa8.05□□□□□ -1.12
PBX1-212ENST00000540236 PTPRZ1P23471 2315 aaPredicted RBP8.05□□□□□ -1.12
PBX1-212ENST00000540236 ROS1P08922 2347 aa8.04□□□□□ -1.12
PBX1-212ENST00000540236 TM2D3Q9BRN9 247 aa8.04□□□□□ -1.12
PBX1-212ENST00000540236 PRR15LQ9BU68 103 aa8.04□□□□□ -1.12
PBX1-212ENST00000540236 FREM2Q5SZK8 3169 aa8.04□□□□□ -1.12
PBX1-212ENST00000540236 CFAP54Q96N23 3096 aa8.04□□□□□ -1.12
PBX1-212ENST00000540236 A6NED7 52 aa8.04□□□□□ -1.12
PBX1-212ENST00000540236 DNAJC9-AS1A6NH13 148 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 MED14OSP0DP75 135 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 LENEPQ9Y5L5 61 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 PRYO14603 147 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 LINC00574Q9H8X3 128 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 VPS13AQ96RL7 3174 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 LITAFQ99732 161 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 PKDREJQ9NTG1 2253 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 K7EQD1 137 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 ZFP36P26651 326 aaKnown RBP8.03□□□□□ -1.12
PBX1-212ENST00000540236 C6orf99Q4VX62 202 aa8.03□□□□□ -1.12
PBX1-212ENST00000540236 MINOS1-NBL1R4GNA1 71 aa8.02□□□□□ -1.12
PBX1-212ENST00000540236 DEFB121Q5J5C9 76 aa8.02□□□□□ -1.13
PBX1-212ENST00000540236 LOC100131303A0A0U1RQF7 123 aa8.02□□□□□ -1.13
PBX1-212ENST00000540236 MAPK1IP1LQ8NDC0 245 aa8.02□□□□□ -1.13
PBX1-212ENST00000540236 A0A1W2PNU3 283 aaPredicted RBP8.01□□□□□ -1.13
PBX1-212ENST00000540236 ATP5EP2Q5VTU8 51 aa8.01□□□□□ -1.13
PBX1-212ENST00000540236 SPTBN5Q9NRC6 3674 aaKnown RBP8.01□□□□□ -1.13
PBX1-212ENST00000540236 CCL18P55774 89 aa8.01□□□□□ -1.13
PBX1-212ENST00000540236 TMEM89A2RUT3 159 aa8.01□□□□□ -1.13
PBX1-212ENST00000540236 LINC01547P58512 204 aaPredicted RBP8.01□□□□□ -1.13
PBX1-212ENST00000540236 PRRC2AP48634 2157 aaKnown RBP8.01□□□□□ -1.13
PBX1-212ENST00000540236 CHCHD7Q9BUK0 85 aa8.01□□□□□ -1.13
PBX1-212ENST00000540236 DEFB116Q30KQ4 102 aa8□□□□□ -1.13
PBX1-212ENST00000540236 FAM229BQ4G0N7 80 aa8□□□□□ -1.13
PBX1-212ENST00000540236 LINC00269Q8N2A0 174 aa8□□□□□ -1.13
PBX1-212ENST00000540236 SLURP1P55000 103 aa8□□□□□ -1.13
PBX1-212ENST00000540236 RP1L1Q8IWN7 2480 aaPredicted RBP8□□□□□ -1.13
PBX1-212ENST00000540236 C9orf116Q5BN46 136 aaPredicted RBP8□□□□□ -1.13
PBX1-212ENST00000540236 USMG5Q96IX5 58 aa7.99□□□□□ -1.13
PBX1-212ENST00000540236 BEAN1Q3B7T3 259 aa7.99□□□□□ -1.13
PBX1-212ENST00000540236 WFDC10BQ8IUB3 73 aa7.99□□□□□ -1.13
PBX1-212ENST00000540236 KAAG1Q9UBP8 84 aa7.99□□□□□ -1.13
PBX1-212ENST00000540236 TMEM254Q8TBM7 123 aa7.98□□□□□ -1.13
PBX1-212ENST00000540236 C10orf99Q6UWK7 81 aa7.98□□□□□ -1.13
PBX1-212ENST00000540236 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
PBX1-212ENST00000540236 DCHS1Q96JQ0 3298 aa7.98□□□□□ -1.13
PBX1-212ENST00000540236 SMIM1B2RUZ4 78 aa7.98□□□□□ -1.13
PBX1-212ENST00000540236 LINC00242Q5T6M2 205 aa7.98□□□□□ -1.13
PBX1-212ENST00000540236 Q8N814 137 aa7.98□□□□□ -1.13
PBX1-212ENST00000540236 C11orf72Q8NBR9 251 aa7.98□□□□□ -1.13
PBX1-212ENST00000540236 IGHV4-30-2A0A087WSY4 118 aa7.98□□□□□ -1.13
PBX1-212ENST00000540236 C5orf56Q8N8D9 126 aa7.98□□□□□ -1.13
PBX1-212ENST00000540236 ESRGQ1W209 222 aa7.97□□□□□ -1.13
PBX1-212ENST00000540236 LY6LH3BQJ8 138 aa7.97□□□□□ -1.13
PBX1-212ENST00000540236 NDUFC1O43677 76 aa7.97□□□□□ -1.13
PBX1-212ENST00000540236 Q6ZQY7 126 aa7.96□□□□□ -1.13
PBX1-212ENST00000540236 PF4P02776 101 aa7.96□□□□□ -1.13
PBX1-212ENST00000540236 ATP5EP56381 51 aaPredicted RBP7.96□□□□□ -1.13
PBX1-212ENST00000540236 Q6ZVQ6 151 aa7.96□□□□□ -1.13
PBX1-212ENST00000540236 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.96□□□□□ -1.14
PBX1-212ENST00000540236 HIGD2BQ4VC39 106 aa7.96□□□□□ -1.14
PBX1-212ENST00000540236 Q96MF0 132 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms