RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 SMIM15Q7Z3B0 74 aa12.2□□□□□ -0.46
LPCAT3-210ENST00000540090 RPP21Q9H633 154 aaKnown RBP12.2□□□□□ -0.46
LPCAT3-210ENST00000540090 CDC42SE2Q9NRR3 84 aa12.2□□□□□ -0.46
LPCAT3-210ENST00000540090 TRBV6-5A0A0K0K1A5 114 aa12.19□□□□□ -0.46
LPCAT3-210ENST00000540090 ISOC2Q96AB3 205 aa12.19□□□□□ -0.46
LPCAT3-210ENST00000540090 TEX46H3BTG2 121 aa12.18□□□□□ -0.46
LPCAT3-210ENST00000540090 FAM210AQ96ND0 272 aa12.18□□□□□ -0.46
LPCAT3-210ENST00000540090 RNASE7Q9H1E1 156 aaKnown RBP12.18□□□□□ -0.46
LPCAT3-210ENST00000540090 IGLV4-69A0A075B6H9 119 aa12.17□□□□□ -0.46
LPCAT3-210ENST00000540090 TSHBP01222 138 aa12.17□□□□□ -0.46
LPCAT3-210ENST00000540090 MT-ND6P03923 174 aa12.17□□□□□ -0.46
LPCAT3-210ENST00000540090 C9orf116Q5BN46 136 aaPredicted RBP12.17□□□□□ -0.46
LPCAT3-210ENST00000540090 EIF5AL1Q6IS14 154 aaKnown RBP12.17□□□□□ -0.46
LPCAT3-210ENST00000540090 MRPL52Q86TS9 123 aaKnown RBP12.17□□□□□ -0.46
LPCAT3-210ENST00000540090 NUP35Q8NFH5 326 aa12.17□□□□□ -0.46
LPCAT3-210ENST00000540090 MRAP2Q96G30 205 aa12.17□□□□□ -0.46
LPCAT3-210ENST00000540090 MUC2Q02817 5179 aa12.16□□□□□ -0.46
LPCAT3-210ENST00000540090 BCL2P10415 239 aa12.16□□□□□ -0.46
LPCAT3-210ENST00000540090 BATF3Q9NR55 127 aa12.16□□□□□ -0.46
LPCAT3-210ENST00000540090 K7EN84 100 aa12.15□□□□□ -0.46
LPCAT3-210ENST00000540090 APOMO95445 188 aa12.15□□□□□ -0.46
LPCAT3-210ENST00000540090 C1orf137Q5JT78 98 aa12.15□□□□□ -0.46
LPCAT3-210ENST00000540090 OCC1Q8TAD7 63 aa12.15□□□□□ -0.46
LPCAT3-210ENST00000540090 PRR26Q8N8Z3 221 aa12.14□□□□□ -0.47
LPCAT3-210ENST00000540090 ST20Q9HBF5 79 aa12.14□□□□□ -0.47
LPCAT3-210ENST00000540090 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
LPCAT3-210ENST00000540090 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.13□□□□□ -0.47
LPCAT3-210ENST00000540090 MALP21145 153 aa12.13□□□□□ -0.47
LPCAT3-210ENST00000540090 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
LPCAT3-210ENST00000540090 RGS21Q2M5E4 152 aa12.13□□□□□ -0.47
LPCAT3-210ENST00000540090 C2orf48Q96LS8 159 aa12.13□□□□□ -0.47
LPCAT3-210ENST00000540090 CAMK2N2Q96S95 79 aa12.13□□□□□ -0.47
LPCAT3-210ENST00000540090 C1orf196B1AJZ1 125 aa12.12□□□□□ -0.47
LPCAT3-210ENST00000540090 COX7A2LO14548 114 aa12.12□□□□□ -0.47
LPCAT3-210ENST00000540090 PHF5AQ7RTV0 110 aaKnown RBP12.12□□□□□ -0.47
LPCAT3-210ENST00000540090 DIRC1Q969H9 104 aa12.11□□□□□ -0.47
LPCAT3-210ENST00000540090 TRBV27A0A0K0K1C4 114 aa12.1□□□□□ -0.47
LPCAT3-210ENST00000540090 C7orf77A4D0Y5 90 aa12.1□□□□□ -0.47
LPCAT3-210ENST00000540090 IGLV7-43P04211 117 aa12.09□□□□□ -0.47
LPCAT3-210ENST00000540090 CSDC2Q9Y534 153 aaKnown RBP12.09□□□□□ -0.47
LPCAT3-210ENST00000540090 A8MWL6 223 aa12.08□□□□□ -0.48
LPCAT3-210ENST00000540090 TAGLN2P37802 199 aaKnown RBP12.08□□□□□ -0.48
LPCAT3-210ENST00000540090 RPL18AQ02543 176 aaKnown RBP12.08□□□□□ -0.48
LPCAT3-210ENST00000540090 RNF151Q2KHN1 245 aa12.08□□□□□ -0.48
LPCAT3-210ENST00000540090 OPRPNQ99935 248 aaPredicted RBP12.08□□□□□ -0.48
LPCAT3-210ENST00000540090 GATCO43716 136 aaKnown RBP12.07□□□□□ -0.48
LPCAT3-210ENST00000540090 FAM231DQ6ZW35 169 aa12.06□□□□□ -0.48
LPCAT3-210ENST00000540090 C5orf38Q86SI9 138 aa12.06□□□□□ -0.48
LPCAT3-210ENST00000540090 TMEM191AQ9H0A3 160 aa12.06□□□□□ -0.48
LPCAT3-210ENST00000540090 H0Y9J4 135 aa12.05□□□□□ -0.48
LPCAT3-210ENST00000540090 RAB4AP20338 218 aa12.05□□□□□ -0.48
LPCAT3-210ENST00000540090 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
LPCAT3-210ENST00000540090 IGLV1-50A0A075B6I6 118 aa12.04□□□□□ -0.48
LPCAT3-210ENST00000540090 A0A087WZ39 114 aa12.04□□□□□ -0.48
LPCAT3-210ENST00000540090 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
LPCAT3-210ENST00000540090 VCYO14598 125 aa12.04□□□□□ -0.48
LPCAT3-210ENST00000540090 CT83Q5H943 113 aa12.04□□□□□ -0.48
LPCAT3-210ENST00000540090 SPAG11BQ08648 103 aa12.03□□□□□ -0.48
LPCAT3-210ENST00000540090 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
LPCAT3-210ENST00000540090 RNASE13Q5GAN3 156 aaKnown RBP12.03□□□□□ -0.48
LPCAT3-210ENST00000540090 KRTAP11-1Q8IUC1 163 aa12.03□□□□□ -0.48
LPCAT3-210ENST00000540090 TSKUQ8WUA8 353 aa12.03□□□□□ -0.48
LPCAT3-210ENST00000540090 BORCS7Q96B45 105 aa12.03□□□□□ -0.48
LPCAT3-210ENST00000540090 KRTAP1-4P0C5Y4 121 aa12.02□□□□□ -0.49
LPCAT3-210ENST00000540090 MRPL35Q9NZE8 188 aaKnown RBP12.02□□□□□ -0.49
LPCAT3-210ENST00000540090 A0A1B0GUT8 65 aa12.01□□□□□ -0.49
LPCAT3-210ENST00000540090 FCER1GP30273 86 aa12.01□□□□□ -0.49
LPCAT3-210ENST00000540090 IMMP2LQ96T52 175 aa12.01□□□□□ -0.49
LPCAT3-210ENST00000540090 FAM168BA1KXE4 195 aa12□□□□□ -0.49
LPCAT3-210ENST00000540090 F8WDY8 70 aa12□□□□□ -0.49
LPCAT3-210ENST00000540090 AMN1Q8IY45 258 aa12□□□□□ -0.49
LPCAT3-210ENST00000540090 OR10D4PQ8NGN7 298 aa12□□□□□ -0.49
LPCAT3-210ENST00000540090 KRTAP9-2Q9BYQ4 174 aa12□□□□□ -0.49
LPCAT3-210ENST00000540090 HIGD1CA8MV81 97 aa11.99□□□□□ -0.49
LPCAT3-210ENST00000540090 PRR4Q16378 134 aa11.99□□□□□ -0.49
LPCAT3-210ENST00000540090 TMEM250H0YL14 139 aa11.98□□□□□ -0.49
LPCAT3-210ENST00000540090 TLX1NBP0CAT3 122 aa11.98□□□□□ -0.49
LPCAT3-210ENST00000540090 Q6ZUT4 128 aa11.98□□□□□ -0.49
LPCAT3-210ENST00000540090 TIMM21Q9BVV7 248 aa11.98□□□□□ -0.49
LPCAT3-210ENST00000540090 SMKR1H3BMG3 65 aa11.97□□□□□ -0.49
LPCAT3-210ENST00000540090 PPP1R17O96001 155 aa11.97□□□□□ -0.49
LPCAT3-210ENST00000540090 SUMO2P61956 95 aaKnown RBP11.97□□□□□ -0.49
LPCAT3-210ENST00000540090 TMEM241Q24JQ0 296 aa11.97□□□□□ -0.49
LPCAT3-210ENST00000540090 NRACQ8N912 160 aa11.97□□□□□ -0.49
LPCAT3-210ENST00000540090 KIR2DL4Q99706 377 aa11.97□□□□□ -0.49
LPCAT3-210ENST00000540090 A0A0U1RQV1 116 aa11.96□□□□□ -0.49
LPCAT3-210ENST00000540090 C10orf25Q5T742 122 aa11.96□□□□□ -0.49
LPCAT3-210ENST00000540090 ORAOV1Q8WV07 137 aa11.96□□□□□ -0.49
LPCAT3-210ENST00000540090 IGHV3OR16-9A0A0B4J2B5 98 aa11.95□□□□□ -0.5
LPCAT3-210ENST00000540090 NDUFA1O15239 70 aa11.95□□□□□ -0.5
LPCAT3-210ENST00000540090 SLC51BQ86UW2 128 aa11.95□□□□□ -0.5
LPCAT3-210ENST00000540090 KRTAP7-1Q8IUC3 87 aa11.95□□□□□ -0.5
LPCAT3-210ENST00000540090 TMEM18Q96B42 140 aa11.95□□□□□ -0.5
LPCAT3-210ENST00000540090 RPL13AP40429 203 aaKnown RBP11.94□□□□□ -0.5
LPCAT3-210ENST00000540090 UBE2D1P51668 147 aa11.94□□□□□ -0.5
LPCAT3-210ENST00000540090 FAM19A5Q7Z5A7 132 aaPredicted RBP11.94□□□□□ -0.5
LPCAT3-210ENST00000540090 UNQ6190/PRO20217Q6UXQ8 127 aa11.93□□□□□ -0.5
LPCAT3-210ENST00000540090 FAM104AQ969W3 186 aa11.93□□□□□ -0.5
LPCAT3-210ENST00000540090 C6orf48Q9UBA6 75 aa11.93□□□□□ -0.5
LPCAT3-210ENST00000540090 PPP1R2P9O14990 202 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 983.2 ms