RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 PRSS47A8MTI9 375 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 H7C423 109 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 UBE2L6O14933 153 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 MT-ND6P03923 174 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 ANGP03950 147 aaKnown RBP4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 COX19Q49B96 90 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 ENHOQ6UWT2 76 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 C20orf203Q8NBC4 194 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 UBE2WQ96B02 151 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 KIR2DL4Q99706 377 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 PRR34Q9NV39 138 aa4.66□□□□□ -1.66
LPCAT3-209ENST00000540060 TCAPO15273 167 aa4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 CRPP02741 224 aa4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 FGF6P10767 208 aa4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 ZNF25P17030 456 aaPredicted RBP4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 FCER1GP30273 86 aa4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 Q0VG73 95 aa4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 CLPSL2Q6UWE3 100 aa4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 MRPL52Q86TS9 123 aaKnown RBP4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 CBLN2Q8IUK8 224 aa4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 LINC00269Q8N2A0 174 aa4.65□□□□□ -1.67
LPCAT3-209ENST00000540060 DNAH5Q8TE73 4624 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 PSCAO43653 123 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 REG3AQ06141 175 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 MIAQ16674 131 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 KIAA1644Q3SXP7 199 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 AMMECR1LQ6DCA0 310 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 RMI2Q96E14 147 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 TM2D2Q9BX73 214 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 MAP1LC3AQ9H492 121 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 AP5S1Q9NUS5 200 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 UBE2D4Q9Y2X8 147 aa4.64□□□□□ -1.67
LPCAT3-209ENST00000540060 DYNC1H1Q14204 4646 aaKnown RBP4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 IGKV2D-24A0A075B6R9 120 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 A0A087WTM6 91 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 LOC389332A0A1B0GUA5 103 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 LRCOL1A6NCL2 159 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 H3BS24 57 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 RNASEKQ6P5S7 137 aaKnown RBP4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 MAPKAPK5-AS1Q8N8E1 139 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 Q8N8P6 123 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 ALKBH7Q9BT30 221 aaPredicted RBP4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 C1orf43Q9BWL3 253 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 SMCO4Q9NRQ5 59 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 COX11Q9Y6N1 276 aa4.63□□□□□ -1.67
LPCAT3-209ENST00000540060 K7EMI3 77 aa4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 RPL39P62891 51 aaKnown RBP4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 FABP9Q0Z7S8 132 aa4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 WFDC2Q14508 124 aa4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 KRTAP26-1Q6PEX3 210 aa4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 OR5A1Q8NGJ0 315 aa4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 TMEM18Q96B42 140 aa4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 TMEM101Q96IK0 257 aa4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 TIMM21Q9BVV7 248 aa4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 NXT2Q9NPJ8 142 aaKnown RBP4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 CSDC2Q9Y534 153 aaKnown RBP4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 TRAPPC1Q9Y5R8 145 aa4.62□□□□□ -1.67
LPCAT3-209ENST00000540060 IGLV10-54A0A075B6I4 117 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 TRAV8-4A0A0B4J246 113 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 RAB5AP20339 215 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 IFI27P40305 119 aaPredicted RBP4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 KRTAP10-2P60368 255 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 SMAGPQ0VAQ4 97 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 ORMDL2Q53FV1 153 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 Q6ZUT4 128 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 SPATA12Q7Z6I5 190 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 ZNF664Q8N3J9 261 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 FAM104AQ969W3 186 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 CDIP1Q9H305 208 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 CDC42SE2Q9NRR3 84 aa4.61□□□□□ -1.67
LPCAT3-209ENST00000540060 IGKV3OR2-268A0A0C4DH90 116 aa4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 LINC01546A6NGU7 62 aa4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 LECT2O14960 151 aa4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 RNASE13Q5GAN3 156 aaKnown RBP4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 DGAT2L7PQ6IED9 249 aa4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 C2orf66Q6UXQ4 117 aa4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 Q8N814 137 aa4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 C18orf32Q8TCD1 76 aa4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 BAALCQ8WXS3 180 aa4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 SPANXA1Q9NS26 97 aa4.6□□□□□ -1.67
LPCAT3-209ENST00000540060 LINC00959A0A1B0GUT2 108 aa4.59□□□□□ -1.67
LPCAT3-209ENST00000540060 SCO1O75880 301 aa4.59□□□□□ -1.67
LPCAT3-209ENST00000540060 MRPS36P82909 103 aaKnown RBP4.59□□□□□ -1.67
LPCAT3-209ENST00000540060 PRSS3P2Q8NHM4 247 aa4.59□□□□□ -1.67
LPCAT3-209ENST00000540060 CHCHD10Q8WYQ3 142 aaPredicted RBP4.59□□□□□ -1.67
LPCAT3-209ENST00000540060 URB1-AS1Q96HZ7 61 aa4.59□□□□□ -1.67
LPCAT3-209ENST00000540060 CYSLTR1Q9Y271 337 aa4.59□□□□□ -1.67
LPCAT3-209ENST00000540060 PYGO1Q9Y3Y4 419 aa4.59□□□□□ -1.67
LPCAT3-209ENST00000540060 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 GAGE12HA6NDE8 117 aa4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 COLCA2A8K830 154 aa4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 USP17L23D6RBM5 183 aa4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 ZNF561-AS1K7EIQ3 104 aa4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 CCL25O15444 150 aa4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 FUSP35637 526 aaKnown RBP eCLIP4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 NTN5Q8WTR8 489 aaPredicted RBP4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 TOMM6Q96B49 74 aa4.58□□□□□ -1.68
LPCAT3-209ENST00000540060 OPRPNQ99935 248 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms